Clone FI19014 Report

Search the DGRC for FI19014

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:190
Well:14
Vector:pOT2
Associated Gene/TranscriptFim-RD
Protein status:FI19014.pep: gold
Sequenced Size:2668

Clone Sequence Records

FI19014.complete Sequence

2668 bp assembled on 2012-04-06

GenBank Submission: BT133379.1

> FI19014.complete
GAAAGCGAATCAGCCAAAAAAGAAAGAAGAACGAAGAACGAGGAAGAAAG
CAAGGAGTAGTTACAAGAAATATTTAATTAAAGCTCGCATCCTTGGCTCT
CTCGCGCCGACTTTCTTTCGCTCTCTCCCGATCAATTGGAGATCTCTTCC
GCTCGCGCACCACCCACTCTCTTTCTGACGCGTTTGTGCGTGTGTTGTGT
ACTTACTGTGTGCAAATCAATTAATTTTTTGTTGTTTGTTTGTTTTCGCA
ACGAAAACCAGAAGGAATATCGTAAATAATAAAATTAATTCCGCGTGCAA
ACATACATTGGAATAATGGCCGATATTCTCAACGTGGAGCAGCACCAAAC
GGTTCAGGAGTTCAAGCAGAATCTCGAGGAGCTCATTCCCAACTTGGATG
CCAACAAAGATGGCTTCATCGATCTGCACGAGCTAAAGGATGCCCTCAAC
CAGGTGGGCTTCAAGCTGGCCGGCTACCAGGTGCGCGAAATGATTGACGA
GTACAAGGGCAAACAGCTGACTGCCTTCCAGGGCAAATTGAATCTGGAGG
AGTTCGAGGCACTGTGCCTGGACCTGAAGAGCAAGGATGTGGCCAGCACA
TTCAAGACGGTCGTCTCCAAGAAGGAGAACTTGGAGACCCTGGGCGGCAT
GTCGAGCATTTCGTCGGAGGGCACCACCCATTCGGTGCGCCTCGAGGAGC
AGCTGGCCTTCTCCGACTGGATTAACTCGAATCTGGGCCACGACAAGGAT
CTGCAACATCTGCTGCCCATCGATAGCGAGGGCAAGCGCTTGTATCTGAG
CATCAAGGATGGTATTCTGCTGTGCAAAATTATCAACCACTCCTGCCCGG
ACACAATCGATGAGCGTGCGATCAACAAGAAGAACCTCACCGTCTACCGG
GAGTTTGAGAACTTGACCCTGGCCTTGGTTTCCTCCCAGGCGATTGGATG
CAACATCGTAAACATCGATGCCCACGATCTGGCCAAGGGCAAGCCACATC
TGGTGCTGGGTCTTCTCTGGCAGATCATCCGCATCGGTCTGTTTAGCCAC
ATCACCCTGGACAGCTGTCCGGGATTGGCTGGCCTACTCTTCGACAACGA
ACGTCTCGAGGATCTGATGAAGATGTCGCCGGAGGCCATCCTTTTGCGTT
GGGTCAACCATCATTTGGAGCGAGCCGGCATCTCGAGGCGGTGCACCAAC
TTCCAGTCGGACATCGTCGATTCTGAGATCTATTCGCATTTGCTGAAGCA
AATTGCCGGCAATGATGCTGATGTCAATCTGGATGCCCTGCGGGAATCCG
ATCTGCAGTCGCGCGCGGAGATCATGTTGCAGCAGGCCGCCAAGCTCAAC
TGCCGCAGCTTCCTCACGCCACAGGATGTCGTCAACGGAGTCTACAAACT
CAATCTAGCCTTCGTGGCTAATCTGTTCAACAACCATCCAGGATTGGACA
AGCCCGAGCAGATCGAGGGACTCGAGTCCATTGAGGAGACGCGCGAAGAG
AAGACCTACCGCAACTGGATGAACTCAATGGGCGTGGCACCGCACGTGAA
CTGGCTTTACTCCGATTTGGCCGACGGTCTGGTCATTTTCCAGCTGTTCG
ACGTCATCAAGCCCGGTATTGTCAACTGGAGCCGTGTGCACAAGCGTTTC
AGCCCGCTGCGCAAGTTCATGGAAAAGCTGGAGAACTGCAACTATGCGGT
GGATCTGGGCAAGCAGCTCAAATTCTCGCTGGTCGGAATCGCAGGCCAGG
ATCTAAACGATGGCAATGCCACGCTGACGTTGGCTCTCATCTGGCAGCTT
ATGCGTGCCTACACCCTGTCCATTCTGTCCCGCTTGGCCAACACCGGCAA
CCCCATTATCGAGAAGGAGATCGTCCAGTGGGTGAATAACCGACTGTCGG
AGGCAGGCAAACAGTCGCAGCTGCGTAACTTCAACGATCCGGCCATCGCC
GATGGCAAGATCGTGATCGATCTGATCGATGCCATCAAGGAGGGCAGCAT
TAACTACGAGTTGGTGCGCACTAGCGGAACACAGGAGGATAACCTGGCCA
ATGCCAAGTATGCCATCTCCATGGCCCGCAAGATCGGCGCCCGTGTCTAC
GCCCTGCCCGAGGACATCACCGAGGTGAAGCCGAAAATGGTGATGACCGT
TTTCGCCTGCATGATGGCCCTCGACTACGTGCCCAACATGGACAGTGTGG
ACCAGAACAACCACAACAGCTCCGCCAACAACAGCAATTAGGCGCCATAG
CCACAACTCATTTATACATAAACAAAAGGATGGGATTTTGAAAGGGAAGA
ACAGAGTGGGAACTACGTAAATTTGTCGTATTCGCTAATTACTAATAACT
CTATTCGATTGCGTTCCTTCCTGCGCTACCAATACATTTTTGTGTTTTTT
TTTTATTTCAATTACTTTTTGTAATTTTTTTATTATATATTTATATATTA
TATAATTGAGTATGAGTTTCCCCCTATTGTAATTAAGCAAACAGATTTTA
GAGTGTCGCACATCTGTTTTCGAGCCCGGCGGGGTGTTTCTTAATTAGTT
TTGTTTAACAATTGATTAATTATACAACTGTAACCTTATTTTATAAATAA
AGGTTTAGCTTTTTCCGCTTAAAATCCTTAAAAGAAAAGAATGGTGAAAC
AAAAAAAAAAAAAAAAAA

FI19014.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 17177376..17178486 1504..394 5555 100 Minus
chrX 22417052 chrX 17175712..17176326 2650..2036 3045 99.7 Minus
chrX 22417052 chrX 17180700..17181092 393..1 1965 100 Minus
chrX 22417052 chrX 17176704..17176982 1783..1505 1395 100 Minus
chrX 22417052 chrX 17176384..17176639 2038..1783 1280 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:18:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17287927..17289037 1504..394 5555 100 Minus
X 23542271 X 17286246..17286878 2668..2036 3120 99.5 Minus
X 23542271 X 17291251..17291643 393..1 1965 100 Minus
X 23542271 X 17287256..17287534 1783..1505 1350 98.9 Minus
X 23542271 X 17286936..17287191 2038..1783 1265 99.6 Minus
Blast to na_te.dros performed 2019-03-15 13:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2599..2666 2206..2275 128 68.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1521..1577 2184..2237 115 71.9 Plus

FI19014.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:20:02 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 17175712..17175904 2458..2650 98 == Minus
chrX 17175968..17176324 2038..2394 100 <- Minus
chrX 17176385..17176638 1784..2037 100 <- Minus
chrX 17176704..17176982 1505..1783 100 <- Minus
chrX 17177376..17178486 394..1504 100 <- Minus
chrX 17180700..17181092 1..393 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-06 12:50:36 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 1..1926 316..2241 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:00:31 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 1..1926 316..2241 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:27:15 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 1..1926 316..2241 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 12:50:36 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 26..2675 1..2650 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:00:31 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 27..2676 1..2650 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:27:15 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
Fim-RD 27..2676 1..2650 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:02 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
X 17286937..17287190 1784..2037 99 <- Minus
X 17286264..17286876 2038..2650 99 <- Minus
X 17287256..17287534 1505..1783 98 <- Minus
X 17287927..17289037 394..1504 100 <- Minus
X 17291251..17291643 1..393 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:02 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
X 17286937..17287190 1784..2037 99 <- Minus
X 17286264..17286876 2038..2650 99 <- Minus
X 17287256..17287534 1505..1783 98 <- Minus
X 17287927..17289037 394..1504 100 <- Minus
X 17291251..17291643 1..393 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:02 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
X 17286937..17287190 1784..2037 99 <- Minus
X 17286264..17286876 2038..2650 99 <- Minus
X 17287256..17287534 1505..1783 98 <- Minus
X 17287927..17289037 394..1504 100 <- Minus
X 17291251..17291643 1..393 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:00:31 Download gff for FI19014.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17180970..17181223 1784..2037 99 <- Minus
arm_X 17181289..17181567 1505..1783 98 <- Minus
arm_X 17180297..17180909 2038..2650 99 <- Minus
arm_X 17181960..17183070 394..1504 100 <- Minus
arm_X 17185284..17185676 1..393 100   Minus

FI19014.hyp Sequence

Translation from 315 to 2240

> FI19014.hyp
MADILNVEQHQTVQEFKQNLEELIPNLDANKDGFIDLHELKDALNQVGFK
LAGYQVREMIDEYKGKQLTAFQGKLNLEEFEALCLDLKSKDVASTFKTVV
SKKENLETLGGMSSISSEGTTHSVRLEEQLAFSDWINSNLGHDKDLQHLL
PIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAINKKNLTVYREFENL
TLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDS
CPGLAGLLFDNERLEDLMKMSPEAILLRWVNHHLERAGISRRCTNFQSDI
VDSEIYSHLLKQIAGNDADVNLDALRESDLQSRAEIMLQQAAKLNCRSFL
TPQDVVNGVYKLNLAFVANLFNNHPGLDKPEQIEGLESIEETREEKTYRN
WMNSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFSPLRK
FMEKLENCNYAVDLGKQLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYT
LSILSRLANTGNPIIEKEIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIV
IDLIDAIKEGSINYELVRTSGTQEDNLANAKYAISMARKIGARVYALPED
ITEVKPKMVMTVFACMMALDYVPNMDSVDQNNHNSSANNSN*

FI19014.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:23
Subject Length Description Subject Range Query Range Score Percent Strand
Fim-PD 641 CG8649-PD 1..641 1..641 3296 100 Plus
Fim-PA 640 CG8649-PA 16..640 17..641 3171 98.7 Plus
Fim-PC 616 CG8649-PC 2..616 27..641 3164 100 Plus

FI19014.pep Sequence

Translation from 315 to 2240

> FI19014.pep
MADILNVEQHQTVQEFKQNLEELIPNLDANKDGFIDLHELKDALNQVGFK
LAGYQVREMIDEYKGKQLTAFQGKLNLEEFEALCLDLKSKDVASTFKTVV
SKKENLETLGGMSSISSEGTTHSVRLEEQLAFSDWINSNLGHDKDLQHLL
PIDSEGKRLYLSIKDGILLCKIINHSCPDTIDERAINKKNLTVYREFENL
TLALVSSQAIGCNIVNIDAHDLAKGKPHLVLGLLWQIIRIGLFSHITLDS
CPGLAGLLFDNERLEDLMKMSPEAILLRWVNHHLERAGISRRCTNFQSDI
VDSEIYSHLLKQIAGNDADVNLDALRESDLQSRAEIMLQQAAKLNCRSFL
TPQDVVNGVYKLNLAFVANLFNNHPGLDKPEQIEGLESIEETREEKTYRN
WMNSMGVAPHVNWLYSDLADGLVIFQLFDVIKPGIVNWSRVHKRFSPLRK
FMEKLENCNYAVDLGKQLKFSLVGIAGQDLNDGNATLTLALIWQLMRAYT
LSILSRLANTGNPIIEKEIVQWVNNRLSEAGKQSQLRNFNDPAIADGKIV
IDLIDAIKEGSINYELVRTSGTQEDNLANAKYAISMARKIGARVYALPED
ITEVKPKMVMTVFACMMALDYVPNMDSVDQNNHNSSANNSN*

FI19014.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22618-PA 651 GF22618-PA 1..637 1..637 3324 97 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18187-PA 641 GG18187-PA 1..641 1..641 3401 99.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:09:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17670-PA 639 GH17670-PA 16..629 17..630 3155 95.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
Fim-PD 641 CG8649-PD 1..641 1..641 3296 100 Plus
Fim-PA 640 CG8649-PA 16..640 17..641 3171 98.7 Plus
Fim-PC 616 CG8649-PC 2..616 27..641 3164 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:09:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11134-PA 640 GI11134-PA 1..630 1..630 3227 95.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:10:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19835-PA 645 GL19835-PA 16..645 17..641 3200 95.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:10:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21237-PA 645 GA21237-PA 16..645 17..641 3200 95.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:10:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13322-PA 641 GM13322-PA 1..641 1..641 3413 99.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:10:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15680-PA 582 GD15680-PA 1..582 59..641 2991 96.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:10:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19059-PA 637 GJ19059-PA 1..636 1..636 3279 95.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:10:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25227-PA 637 GK25227-PA 1..636 1..636 3290 96.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:10:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15602-PA 641 GE15602-PA 1..641 1..641 3407 99.7 Plus