Clone FI19313 Report

Search the DGRC for FI19313

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:193
Well:13
Vector:pOTB7
Associated Gene/TranscriptCG4365-RC
Protein status:FI19313.pep: gold
Sequenced Size:1179

Clone Sequence Records

FI19313.complete Sequence

1179 bp assembled on 2012-01-13

GenBank Submission: BT133018.1

> FI19313.complete
CGCACACGCTTTTCAGTTTATCTAGTCGAAAGTACAGAATGTTGGCCTCC
GCCTGGCGCAGCGTGGCCACCTCCGTGGAGACCCAGTTGACGGCCACCTA
CTTCCGAGGTTCGTCCAGCAATCCGACACTGCTCCTGCGTTCCTGGCGGA
CGATTCCTCGAGCGGATGCCCCTGGTTTCGGAGCGATTCGGCGGCGGTTT
CTGGCTGTGCCCGTCATCTGTCCAAGTCTCGTCAAGCTGCAAAAACTACG
AAAAGTCGGCTTCAGAGGCATGCACAGCACATTGGAGGACGTGCAGCTGG
AGGGCATGGAGATCAAGATCCTGCCGGCCCTGCAGGACAACTATATGTAT
CTGATTGTAGACACGAAGACGCGCGAGGCGGCCGTGGTGGATCCCGTGGA
GCCGGAGCTGGTCATTAAGACGGTGCAGGAGCAGCAGCTGACCCTCAGCA
AGGTGCTGACCACGCACCATCACTGGGACCACGCCGGTGGCAATGAAAAG
CTGCTCAAGCTGTGGGAGAAGGAGCTGGACGTGTATGGCGGCGATGACCG
CATCGGGGCATTGAACAAAAAGGTTCAGCAGGACGACACCTTCACCATTG
GTGGTCTGCATGTCAAGTGCTTGTCCACGCCGTGCCACACTACCGGCCAC
ATCTGCTACCACATCACCGCGCAGCAGGGCAGCGGCGAGGGAGCCGTCTT
CACCGGCGACACCCTCTTCCAGGGCGGATGCGGCCGCTTCTTCGAGGGCA
CTCCCGAGGAAATGTACGAGGCGCTGTGCACAAAGCTCTCCGCCTTGCCG
GACGCCACAAAGGTGTTCTGTGGCCACGAGTACACGCTGCAGAACATGAG
CTTCGCCCGTCACGTCGAGCCCGACAACGAGGTCATCCAGCAGAGGATCG
AGTGGGCCAAGCACCGGCGCGCCTCCCAGGATCCCACTGTGCCCTCCACC
ATTGGCGAGGAGAAGTCCTGGAACCCCTTTATGCGCGTTCACGAAGCCAC
CGTGCAGAAGCACGCTGGCGGAGCCACCGATCCCGTCGTCACCATGGGCA
AGCTGCGCAAGGAAAAGGACACCTTCAAAGCCTGATCTATTTCCTCGAAA
GTTTCGAAACTTGTGATTTAATATTGGATTTTAATGGTTAATAAAATTAA
CGATGTGTTTGAAAAAAAAAAAAAAAAAA

FI19313.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:23:35
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 20788164..20789084 238..1158 4590 99.9 Plus
chr3L 24539361 chr3L 20787773..20788009 1..237 1155 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20799143..20800068 238..1163 4600 99.8 Plus
3L 28110227 3L 20798752..20798988 1..237 1155 99.2 Plus
Blast to na_te.dros performed on 2019-03-15 12:23:33 has no hits.

FI19313.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:24:16 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 20787773..20788009 1..237 99 -> Plus
chr3L 20788164..20789087 238..1161 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-13 10:43:53 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
CG4365-RC 1..1047 39..1085 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:55 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
CG4365-RC 1..1047 39..1085 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:58:05 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
CG4365-RC 1..1047 39..1085 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-13 10:43:52 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
CG4365-RC 46..1206 1..1161 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:55 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
CG4365-RC 71..1231 1..1161 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:58:05 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
CG4365-RC 71..1231 1..1161 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:16 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20798752..20798988 1..237 99 -> Plus
3L 20799143..20800066 238..1161 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:16 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20798752..20798988 1..237 99 -> Plus
3L 20799143..20800066 238..1161 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:16 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20798752..20798988 1..237 99 -> Plus
3L 20799143..20800066 238..1161 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:55 Download gff for FI19313.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20791852..20792088 1..237 99 -> Plus
arm_3L 20792243..20793166 238..1161 99   Plus

FI19313.hyp Sequence

Translation from 2 to 1084

> FI19313.hyp
HTLFSLSSRKYRMLASAWRSVATSVETQLTATYFRGSSSNPTLLLRSWRT
IPRADAPGFGAIRRRFLAVPVICPSLVKLQKLRKVGFRGMHSTLEDVQLE
GMEIKILPALQDNYMYLIVDTKTREAAVVDPVEPELVIKTVQEQQLTLSK
VLTTHHHWDHAGGNEKLLKLWEKELDVYGGDDRIGALNKKVQQDDTFTIG
GLHVKCLSTPCHTTGHICYHITAQQGSGEGAVFTGDTLFQGGCGRFFEGT
PEEMYEALCTKLSALPDATKVFCGHEYTLQNMSFARHVEPDNEVIQQRIE
WAKHRRASQDPTVPSTIGEEKSWNPFMRVHEATVQKHAGGATDPVVTMGK
LRKEKDTFKA*

FI19313.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG4365-PC 348 CG4365-PC 1..348 13..360 1843 100 Plus
CG4365-PA 305 CG4365-PA 1..305 13..360 1564 87.4 Plus
CG4365-PB 271 CG4365-PB 1..271 90..360 1453 100 Plus
CG30022-PB 279 CG30022-PB 61..221 114..277 209 32.1 Plus

FI19313.pep Sequence

Translation from 2 to 1084

> FI19313.pep
HTLFSLSSRKYRMLASAWRSVATSVETQLTATYFRGSSSNPTLLLRSWRT
IPRADAPGFGAIRRRFLAVPVICPSLVKLQKLRKVGFRGMHSTLEDVQLE
GMEIKILPALQDNYMYLIVDTKTREAAVVDPVEPELVIKTVQEQQLTLSK
VLTTHHHWDHAGGNEKLLKLWEKELDVYGGDDRIGALNKKVQQDDTFTIG
GLHVKCLSTPCHTTGHICYHITAQQGSGEGAVFTGDTLFQGGCGRFFEGT
PEEMYEALCTKLSALPDATKVFCGHEYTLQNMSFARHVEPDNEVIQQRIE
WAKHRRASQDPTVPSTIGEEKSWNPFMRVHEATVQKHAGGATDPVVTMGK
LRKEKDTFKA*

FI19313.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10361-PA 305 GF10361-PA 1..305 13..360 1446 77.3 Plus
Dana\GF12395-PA 657 GF12395-PA 35..196 114..278 227 33.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:36:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16137-PA 348 GG16137-PA 1..348 13..360 1807 94.3 Plus
Dere\GG22649-PA 660 GG22649-PA 35..196 114..278 220 32.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:36:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16754-PA 303 GH16754-PA 1..303 13..360 1337 71.3 Plus
Dgri\GH20506-PA 698 GH20506-PA 35..196 114..278 206 31.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:31
Subject Length Description Subject Range Query Range Score Percent Strand
tzn-PC 348 CG4365-PC 1..348 13..360 1843 100 Plus
tzn-PA 305 CG4365-PA 1..305 13..360 1564 87.4 Plus
tzn-PB 271 CG4365-PB 1..271 90..360 1453 100 Plus
CG30022-PB 279 CG30022-PB 61..221 114..277 209 32.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13415-PA 301 GI13415-PA 1..301 13..360 1251 66.7 Plus
Dmoj\GI21050-PA 859 GI21050-PA 35..198 114..280 225 33 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12815-PA 305 GL12815-PA 1..305 13..360 1443 77.3 Plus
Dper\GL10396-PA 622 GL10396-PA 404..567 114..280 210 33.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:36:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18136-PA 305 GA18136-PA 1..305 13..360 1446 77.6 Plus
Dpse\GA30464-PA 296 GA30464-PA 78..241 114..280 229 35.2 Plus
Dpse\GA24963-PB 268 GA24963-PB 50..213 114..280 211 34.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:36:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22320-PA 348 GM22320-PA 1..348 13..360 1856 98.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14908-PA 348 GD14908-PA 1..348 13..360 1861 98.6 Plus
Dsim\GD25902-PA 657 GD25902-PA 35..196 114..278 215 32 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11540-PA 305 GJ11540-PA 1..305 13..360 1326 70.4 Plus
Dvir\GJ21974-PA 673 GJ21974-PA 35..196 114..278 227 32.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:36:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10504-PA 308 GK10504-PA 1..308 13..360 1334 72.1 Plus
Dwil\GK21885-PA 847 GK21885-PA 35..198 114..280 226 32.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19704-PA 348 GE19704-PA 1..348 13..360 1798 94.5 Plus
Dyak\GE19707-PA 348 GE19707-PA 1..348 13..360 1798 94.5 Plus
Dyak\GE13523-PA 658 GE13523-PA 35..196 114..278 219 32.5 Plus