Clone FI19320 Report

Search the DGRC for FI19320

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:193
Well:20
Vector:pOTB7
Associated Gene/TranscriptAdgf-B-RA
Protein status:FI19320.pep: gold
Sequenced Size:1690

Clone Sequence Records

FI19320.complete Sequence

1690 bp assembled on 2012-02-17

GenBank Submission: BT133247.1

> FI19320.complete
ACGAAATCCTAACTAAATTCTCCATGAAACCCTTAGCGAAATAGAGTGGG
CAACGAAAAGAGCTCACGCAAATATGACGGCCATCAAACATGTGGCCATC
TCCTGTCGCCGAGCATTGACCAAATGTGCAAAAATTGGCCACACTACAGT
GTCCGTGAGTCGGTCCCTCCGGAAACTGTCACCCACGGCGTTCAAGACAC
TTCGACAAGCAATCGCCAAGGTGGGGCACTTAAACATCATGGGTCAGAAG
ATACGACTGAACGATCGGGAATTAGCGGCCAACAAAGTGATCATGGCCGT
CAAGAAGGAAGAGATATCCAAGGGCATACTGGATCCCAGTCAGTTCACGC
CGGGCCAGCACATCTTTAAGACCCTGGCCGAGGTGCAAAAGTCGCCGATC
TTTAACCTGATTAAGGGGATGCCAAAGGGCGGCGCGCTTCATGCCCACGA
TACGGCGCTCTGCAGCACAGACTACCTCATAAGTCTGACCTACCGAAAGA
ATCTTTGGATTTGTACCGCTGAGGAGGGCTGCAAGGCCATTGCTTTTCGG
TTTTCCAAGGAGGAGCCCAAGGAAAAACCTGTTAAGGAATCTATCTGGGA
GCCAATGGAGGAGTTCCGTGAACGGCGAGGAGAGGAGAATGTTACAAAAT
ATCTCACACGTCGATTCAGCATGTACCCCTTCTCCAAGTTCATCTCAAAC
AATCAAGCCTGGGCACACTTCATGGGCATCTTTATTTTGCTCGACGGTTT
GCTCTGCCATGCCCCCATTTGGGCTGAGTACTACTACAATGCCCTCAAGG
AGTTTGCCGAGGACGGAGTTCAATATCTAGAACTGCGATCCCTGCTCCCG
CCACTCTACTGTATCGATGGCGATATGCTGACCATTCGGGACACAGTGGC
CATTTACAATTCGGAGCTGGAACGCTTTCGAGCCGATCATCCAGATTTTA
TTGGCTCCAAACTGATATACGCTCCTCTCAGAGGAGTGGAGCCCAGTGTG
GTCGAGCAATATGTGAAAACAGCTGTCGAACTTAATAAAGAATTTCCTAA
CTTCATGGTTGGCTTTGATCTAGTTGGCCAAGAGGAGTTGGGACGACCGC
TGATTGATTTTGTGGAGCCCCTGCTAAAAATGCCCGAGCACATTAATTTT
TATTTCCATGCGGGGGAGACGAACTGGTTCGGATCTCCCATCGATGAGAA
CCTGGTGGACGCCATCCTGTTGGGCACGAAACGCATCGGCCATGGATACG
CCATTACCAAGCATCCTATGATGATGCGACTGGCCAAACTATTGGGCATA
GCCATCGAGGTGTGTCCGGTGTCAAATCAAGTGCTGCAACTGGGCGTGGA
CTATCGGAATCATCCGGCGGCACTGCTGTTGGCCGCCAATGTCCCCATTG
TTATCTCCTCAGACGATCCATCCTTCTGGCACTGTGCTCCGCTGTCCCAC
GACTTCTACTTCGCCTTCCTGGGCATTGCACCGATGAAGGCGGACCTGAG
GTTCCTCAAAAGCCTGGCCATCAACTCCATCCGGTACAGTGCCCTGGTTG
GCGAGGAAAAGCGAGTGGGGTACCGAAAGTGGCAGGAGAAGTGGGACAAG
TGGATCGACGACGTGGTGGAGCACAAGTACTGTTAATGACCCCCTTTTAG
TAAATAACTCATGCTGCCTTTTAAAAAAAAAAAAAAAAAA

FI19320.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17739162..17740197 1036..1 5030 99 Minus
chr3L 24539361 chr3L 17738464..17739099 1672..1037 3180 100 Minus
chr2R 21145070 chr2R 10544339..10544811 1509..1037 460 73.2 Minus
chr3L 24539361 chr3L 17743475..17743527 470..418 190 90.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:19:45
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17749531..17750566 1036..1 5030 99 Minus
3L 28110227 3L 17748832..17749468 1673..1037 3185 100 Minus
2R 25286936 2R 14657027..14657499 1509..1037 475 73.4 Minus
3L 28110227 3L 17753844..17753896 470..418 190 90.6 Minus
Blast to na_te.dros performed on 2019-03-15 13:19:45 has no hits.

FI19320.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:20:29 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17738464..17739099 1037..1672 100 <- Minus
chr3L 17739162..17740197 1..1036 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-17 12:11:27 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-B-RA 1..1563 74..1636 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:11:00 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-B-RA 1..1563 74..1636 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:28:12 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-B-RA 1..1563 74..1636 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-17 12:11:26 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-B-RA 23..1694 1..1672 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:11:00 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-B-RA 23..1694 1..1672 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:28:12 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
Adgf-B-RA 23..1694 1..1672 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:29 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17748833..17749468 1037..1672 100 <- Minus
3L 17749531..17750566 1..1036 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:29 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17748833..17749468 1037..1672 100 <- Minus
3L 17749531..17750566 1..1036 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:29 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17748833..17749468 1037..1672 100 <- Minus
3L 17749531..17750566 1..1036 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:11:00 Download gff for FI19320.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17741933..17742568 1037..1672 100 <- Minus
arm_3L 17742631..17743666 1..1036 99   Minus

FI19320.hyp Sequence

Translation from 73 to 1635

> FI19320.hyp
MTAIKHVAISCRRALTKCAKIGHTTVSVSRSLRKLSPTAFKTLRQAIAKV
GHLNIMGQKIRLNDRELAANKVIMAVKKEEISKGILDPSQFTPGQHIFKT
LAEVQKSPIFNLIKGMPKGGALHAHDTALCSTDYLISLTYRKNLWICTAE
EGCKAIAFRFSKEEPKEKPVKESIWEPMEEFRERRGEENVTKYLTRRFSM
YPFSKFISNNQAWAHFMGIFILLDGLLCHAPIWAEYYYNALKEFAEDGVQ
YLELRSLLPPLYCIDGDMLTIRDTVAIYNSELERFRADHPDFIGSKLIYA
PLRGVEPSVVEQYVKTAVELNKEFPNFMVGFDLVGQEELGRPLIDFVEPL
LKMPEHINFYFHAGETNWFGSPIDENLVDAILLGTKRIGHGYAITKHPMM
MRLAKLLGIAIEVCPVSNQVLQLGVDYRNHPAALLLAANVPIVISSDDPS
FWHCAPLSHDFYFAFLGIAPMKADLRFLKSLAINSIRYSALVGEEKRVGY
RKWQEKWDKWIDDVVEHKYC*

FI19320.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:06
Subject Length Description Subject Range Query Range Score Percent Strand
Adgf-B-PA 520 CG5998-PA 1..520 1..520 2743 100 Plus
Adgf-E-PA 539 CG10143-PA 43..530 31..518 1619 59.2 Plus
Adgf-A-PB 553 CG5992-PB 62..538 36..514 1363 52.6 Plus
Adgf-A-PA 553 CG5992-PA 62..538 36..514 1363 52.6 Plus
Adgf-D-PA 502 CG9621-PA 27..502 40..519 866 38.8 Plus

FI19320.pep Sequence

Translation from 73 to 1635

> FI19320.pep
MTAIKHVAISCRRALTKCAKIGHTTVSVSRSLRKLSPTAFKTLRQAIAKV
GHLNIMGQKIRLNDRELAANKVIMAVKKEEISKGILDPSQFTPGQHIFKT
LAEVQKSPIFNLIKGMPKGGALHAHDTALCSTDYLISLTYRKNLWICTAE
EGCKAIAFRFSKEEPKEKPVKESIWEPMEEFRERRGEENVTKYLTRRFSM
YPFSKFISNNQAWAHFMGIFILLDGLLCHAPIWAEYYYNALKEFAEDGVQ
YLELRSLLPPLYCIDGDMLTIRDTVAIYNSELERFRADHPDFIGSKLIYA
PLRGVEPSVVEQYVKTAVELNKEFPNFMVGFDLVGQEELGRPLIDFVEPL
LKMPEHINFYFHAGETNWFGSPIDENLVDAILLGTKRIGHGYAITKHPMM
MRLAKLLGIAIEVCPVSNQVLQLGVDYRNHPAALLLAANVPIVISSDDPS
FWHCAPLSHDFYFAFLGIAPMKADLRFLKSLAINSIRYSALVGEEKRVGY
RKWQEKWDKWIDDVVEHKYC*

FI19320.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23893-PA 516 GF23893-PA 14..516 17..520 2172 78.8 Plus
Dana\GF13523-PA 550 GF13523-PA 16..530 12..518 1573 56.3 Plus
Dana\GF23892-PA 557 GF23892-PA 63..541 36..516 1395 53.4 Plus
Dana\GF18149-PA 499 GF18149-PA 24..499 40..519 876 38 Plus
Dana\GF16876-PA 506 GF16876-PA 21..502 36..516 863 36.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15788-PA 520 GG15788-PA 1..520 1..520 2619 92.5 Plus
Dere\GG22410-PA 539 GG22410-PA 41..530 29..518 1631 59.2 Plus
Dere\GG15787-PA 555 GG15787-PA 62..540 36..516 1398 53 Plus
Dere\GG17028-PA 500 GG17028-PA 25..500 40..519 895 38.8 Plus
Dere\GG19793-PA 506 GG19793-PA 24..504 39..518 806 35.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15341-PA 508 GH15341-PA 8..506 18..516 1828 66 Plus
Dgri\GH22920-PA 525 GH22920-PA 28..515 31..518 1476 53.7 Plus
Dgri\GH15340-PA 552 GH15340-PA 57..537 36..514 1389 52.4 Plus
Dgri\GH18002-PA 315 GH18002-PA 1..300 217..514 971 59 Plus
Dgri\GH14048-PA 466 GH14048-PA 4..465 56..519 876 38.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
Adgf-B-PA 520 CG5998-PA 1..520 1..520 2743 100 Plus
Adgf-E-PA 539 CG10143-PA 43..530 31..518 1619 59.2 Plus
Adgf-A-PB 553 CG5992-PB 62..538 36..514 1363 52.6 Plus
Adgf-A-PA 553 CG5992-PA 62..538 36..514 1363 52.6 Plus
Adgf-D-PA 502 CG9621-PA 27..502 40..519 866 38.8 Plus
Adgf-C-PA 506 CG9345-PA 24..502 39..516 815 35.3 Plus
Adgf-A2-PC 542 CG32178-PC 64..537 43..515 780 37.5 Plus
Adgf-A2-PB 542 CG32178-PB 64..537 43..515 780 37.5 Plus
Adgf-A2-PA 561 CG32178-PA 83..556 43..515 780 37.5 Plus
Ada-PA 337 CG11994-PA 82..277 240..448 156 29 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12946-PA 522 GI12946-PA 26..515 27..516 1802 64.1 Plus
Dmoj\GI12945-PA 548 GI12945-PA 55..535 36..514 1356 51.1 Plus
Dmoj\GI24423-PA 501 GI24423-PA 23..501 40..520 925 38.8 Plus
Dmoj\GI12943-PA 573 GI12943-PA 93..571 40..516 845 40.5 Plus
Dmoj\GI23159-PA 509 GI23159-PA 27..507 39..518 811 35 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10635-PA 531 GL10635-PA 32..521 29..518 1696 61 Plus
Dper\GL18074-PA 425 GL18074-PA 2..412 104..516 1282 55.2 Plus
Dper\GL25221-PA 539 GL25221-PA 314..539 293..518 1048 84.1 Plus
Dper\GL24450-PA 499 GL24450-PA 24..499 40..519 890 38.6 Plus
Dper\GL23084-PA 514 GL23084-PA 29..510 36..516 865 36.5 Plus
Dper\GL25221-PA 539 GL25221-PA 18..105 9..96 299 63.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19286-PA 527 GA19286-PA 18..527 9..518 2193 76.7 Plus
Dpse\GA10106-PA 531 GA10106-PA 32..521 29..518 1693 61 Plus
Dpse\GA19282-PA 551 GA19282-PA 35..538 9..516 1439 51.6 Plus
Dpse\GA21919-PA 499 GA21919-PA 24..499 40..519 887 38.6 Plus
Dpse\GA27135-PB 506 GA27135-PB 21..502 36..516 860 36.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:33:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24312-PA 520 GM24312-PA 1..520 1..520 2772 98.5 Plus
Dsec\GM20196-PA 539 GM20196-PA 41..530 29..518 1652 59.4 Plus
Dsec\GM24311-PA 553 GM24311-PA 62..538 36..514 1396 52.6 Plus
Dsec\GM25912-PA 502 GM25912-PA 27..502 40..519 903 39.2 Plus
Dsec\GM24125-PA 506 GM24125-PA 24..502 39..516 846 35.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12382-PA 520 GD12382-PA 1..520 1..520 2779 98.8 Plus
Dsim\GD25667-PA 539 GD25667-PA 41..530 29..518 1649 59.2 Plus
Dsim\GD12381-PA 553 GD12381-PA 62..538 36..514 1401 52.8 Plus
Dsim\GD20479-PA 502 GD20479-PA 27..502 40..519 896 39 Plus
Dsim\GD18924-PA 506 GD18924-PA 24..502 39..516 838 35.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13088-PA 519 GJ13088-PA 7..517 1..516 1927 67.2 Plus
Dvir\GJ21491-PA 530 GJ21491-PA 12..515 12..518 1502 51.9 Plus
Dvir\GJ13087-PA 549 GJ13087-PA 41..535 22..514 1353 50.3 Plus
Dvir\GJ14281-PA 501 GJ14281-PA 23..500 40..519 915 39.9 Plus
Dvir\GJ13086-PA 566 GJ13086-PA 71..566 25..518 838 38.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12328-PA 512 GK12328-PA 19..508 27..516 1984 72.4 Plus
Dwil\GK19522-PA 537 GK19522-PA 19..528 10..518 1714 59.1 Plus
Dwil\GK12327-PA 565 GK12327-PA 73..555 36..518 1436 53.6 Plus
Dwil\GK13065-PA 500 GK13065-PA 25..500 40..519 861 37.8 Plus
Dwil\GK14194-PA 509 GK14194-PA 27..505 39..516 851 37.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22125-PA 519 GE22125-PA 2..519 3..520 2641 93.8 Plus
Dyak\GE12299-PA 534 GE12299-PA 41..530 29..518 1645 58.8 Plus
Dyak\GE22124-PA 553 GE22124-PA 62..540 36..516 1385 51.8 Plus
Dyak\GE24420-PA 500 GE24420-PA 25..500 40..519 894 38.8 Plus
Dyak\GE26291-PA 506 GE26291-PA 24..501 39..515 839 36.4 Plus