Clone FI19323 Report

Search the DGRC for FI19323

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:193
Well:23
Vector:pOTB7
Associated Gene/TranscriptDpit47-RA
Protein status:FI19323.pep: gold
Sequenced Size:1447

Clone Sequence Records

FI19323.complete Sequence

1447 bp assembled on 2012-01-07

GenBank Submission: BT132984.1

> FI19323.complete
AAGATTTAAGATGTTAAGATCATAATTCGTTCCGAGTTTAGCTCGTTTAA
AGAAGGAAGCGTACGACTATCGATAGACGGAGGGCCACCCTTATTTTAGA
GGCGCCACCTTTAGGAAATGTGCGGCACCTTTGGCCAGTTGGTATATTGT
AACGGTTCGTCTGCGGTCACACTGTTTCTGATTAGACCAAATGAAACAAA
TGGCGGCACAAAAAGCCTGGACGGATGAGGAGCGTCTGGAGCTGGCGGCC
CAGCTGGACGCGGAACTGGATGCGTTTATCGATGGCCTGGAGAAGAAACG
TTACGAGGAGGGCTGGCCGGAGGACCGCTGGCAGGAGGAGATGGACAAGC
ACCCGTTCTTCATGAAACGTGCTCCTCAGCCAGGGGATGACGTGCATCCG
ATGTTCGAGGGTCTGCAGAAGCTCAAGTACGATCCGGAGGAGAACACGCG
CGACGAGCTGGCGCTCAACTACAAGGAGGATGGCAACTTTTACATGAAGC
ACAAGAAGTTCCGCATGGCAATCTACAGCTTTACCGAGGGCATCAAGACC
AAGACGGACAATCCCGACGTGCTAGCCGTTCTCTACAACAACCGCTCGGC
GGCTCACTTCTTCATCAAGAACTACAGATCCTCGCTGAGCGACGCCCAGC
GAGCTCTGTTCTACAAGCCAGACTACACAAAGGCCCGCTGGCGGTCGGCA
CAGTGTGCGTACGAGCTGGAGAGGTTCGATCTGTGCACCCAGATGTGCGA
GGAGCTGCTCGAGGTGGACGTCGACAACGAGGTGGCCATCGCGCTGCTGC
ACAAGAACAAGATGAAGAAGCTCGAGATAGAACGCAATCAGCGCAAGGAA
GCTGCCGAGGCAAAGCGACGGCTTACACGCTTCCACAGACTCCGCGACGC
CATCGAGCAGCGCGCCATTAAGTTTGACGATCAAAAAGTTGGCAAAAAGG
ACGTCCTCAGTGAGGAGCTCCTTTATCCAAAGTTTCTGCCTTTGGAGGAC
CATCCGGTGCACCTAGACGAGGACGGCAGCACGCTGATCTGGCCGGCTGC
GTTCTCCTACCCCGAGTTCCTGTACAGCGACTTTTATCAGCAGCTGCCGG
AGACCACCACCATGCGGGATTGCCTGGCGACGCTGCTCACCGAAAAGCTG
CCATACGACAAGGCACACAACTACCGCCTGGGTAACGTGCACGTTTACTA
CGAGAACCGCAAGGTGGGCTGTGTCCACAAGGTGGACGAGGAGAAGCAGC
TGGCCGAGATAATCGCCGAAAAGGGGTTTTTCGTTTCCGGTGGCGCTCTG
CTCTTCTATGTGGTGCACAAGGATTCGCGAGTGGAACAGGAGTTTATAAA
CGAACGGCGACGACCCATGGTTTACAGTTAAGACAGTGAGCAAATAAAGT
GATTCCTTCTTGAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI19323.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:17:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2548492..2549311 820..1 4100 100 Minus
chr2R 21145070 chr2R 2547838..2548436 1417..819 2995 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:17:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6661299..6662118 820..1 4100 100 Minus
2R 25286936 2R 6660638..6661243 1424..819 3000 99.7 Minus
Blast to na_te.dros performed on 2019-03-15 12:17:06 has no hits.

FI19323.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:18:12 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2547838..2548434 821..1417 100 <- Minus
chr2R 2548492..2549311 1..820 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-07 12:04:56 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
Dpit47-RA 1..1191 191..1381 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:55:58 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
Dpit47-RA 1..1191 191..1381 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:56:29 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
Dpit47-RA 1..1191 191..1381 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-07 12:04:55 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
Dpit47-RA 1..1412 1..1412 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:55:58 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
Dpit47-RA 1..1417 1..1417 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:29 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
Dpit47-RA 1..1417 1..1417 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:18:12 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6660645..6661241 821..1417 99 <- Minus
2R 6661299..6662118 1..820 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:18:12 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6660645..6661241 821..1417 99 <- Minus
2R 6661299..6662118 1..820 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:18:12 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6660645..6661241 821..1417 99 <- Minus
2R 6661299..6662118 1..820 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:55:58 Download gff for FI19323.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2548150..2548746 821..1417 99 <- Minus
arm_2R 2548804..2549623 1..820 100   Minus

FI19323.hyp Sequence

Translation from 190 to 1380

> FI19323.hyp
MKQMAAQKAWTDEERLELAAQLDAELDAFIDGLEKKRYEEGWPEDRWQEE
MDKHPFFMKRAPQPGDDVHPMFEGLQKLKYDPEENTRDELALNYKEDGNF
YMKHKKFRMAIYSFTEGIKTKTDNPDVLAVLYNNRSAAHFFIKNYRSSLS
DAQRALFYKPDYTKARWRSAQCAYELERFDLCTQMCEELLEVDVDNEVAI
ALLHKNKMKKLEIERNQRKEAAEAKRRLTRFHRLRDAIEQRAIKFDDQKV
GKKDVLSEELLYPKFLPLEDHPVHLDEDGSTLIWPAAFSYPEFLYSDFYQ
QLPETTTMRDCLATLLTEKLPYDKAHNYRLGNVHVYYENRKVGCVHKVDE
EKQLAEIIAEKGFFVSGGALLFYVVHKDSRVEQEFINERRRPMVYS*

FI19323.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpit47-PB 396 CG3189-PB 1..396 1..396 2101 100 Plus
Dpit47-PA 396 CG3189-PA 1..396 1..396 2101 100 Plus

FI19323.pep Sequence

Translation from 190 to 1380

> FI19323.pep
MKQMAAQKAWTDEERLELAAQLDAELDAFIDGLEKKRYEEGWPEDRWQEE
MDKHPFFMKRAPQPGDDVHPMFEGLQKLKYDPEENTRDELALNYKEDGNF
YMKHKKFRMAIYSFTEGIKTKTDNPDVLAVLYNNRSAAHFFIKNYRSSLS
DAQRALFYKPDYTKARWRSAQCAYELERFDLCTQMCEELLEVDVDNEVAI
ALLHKNKMKKLEIERNQRKEAAEAKRRLTRFHRLRDAIEQRAIKFDDQKV
GKKDVLSEELLYPKFLPLEDHPVHLDEDGSTLIWPAAFSYPEFLYSDFYQ
QLPETTTMRDCLATLLTEKLPYDKAHNYRLGNVHVYYENRKVGCVHKVDE
EKQLAEIIAEKGFFVSGGALLFYVVHKDSRVEQEFINERRRPMVYS*

FI19323.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13804-PA 384 GF13804-PA 1..384 1..396 1740 81.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10816-PA 396 GG10816-PA 1..396 1..396 1974 92.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20065-PA 396 GH20065-PA 1..396 1..396 1725 79.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpit47-PB 396 CG3189-PB 1..396 1..396 2101 100 Plus
Dpit47-PA 396 CG3189-PA 1..396 1..396 2101 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:29:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18783-PA 397 GI18783-PA 1..397 1..396 1746 80.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10216-PA 396 GL10216-PA 1..396 1..396 1861 85.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24121-PA 396 GA24121-PA 1..396 1..396 1869 86.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20865-PA 396 GM20865-PA 1..396 1..396 1984 93.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10316-PA 396 GD10316-PA 1..396 1..396 2005 94.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21809-PA 396 GJ21809-PA 1..396 1..396 1750 80.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19623-PA 397 GK19623-PA 1..397 1..396 1752 81.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24643-PA 396 GE24643-PA 1..396 1..396 1960 92.2 Plus