Clone FI19334 Report

Search the DGRC for FI19334

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:193
Well:34
Vector:pOTB7
Associated Gene/TranscriptCG4065-RB
Protein status:FI19334.pep: gold
Sequenced Size:2564

Clone Sequence Records

FI19334.complete Sequence

2564 bp assembled on 2012-02-17

GenBank Submission: BT133250.1

> FI19334.complete
GTTCGTCACTTGGTCACACTGGACGTTACATATTTTAATTCATTAAAAAT
ATCTTTTATAAATAAAAGAAAATTTGTAACACATCGAGCTACAGGTTGAC
CGCCTGTTGAATATAGGTACAAAAGATGTATCCCTCGACCTTGCCGGCGG
AGGCAGATCCGAGCACCATGAACGGAAGCGTTGCAGAGCCTCCGGACTTC
CAGGCTGCCACGGCGGCCGCGGCGGCAGCTGCCCGGGCCAGTAGCTTGGA
ACAGGACGAGTGGAGCGTGGGCGAGTGCGGATTTCTGGATCCGGATGTGC
AGCGCACCATGCGGAGCGGCAGTGCTGCGGAGGACATCACCCAGTACCCG
ATGCACGGCTGGGTGGACGTAACCAAGGAGTTCCACGATGCCTGCGCGGA
GCTGCAGCCCGGGGAACTGGCCCAGGATATGCTGTTCGGTCTTTTTGAGG
CCATGTCAGCCATCGAGATCATGGACCCCAAGATGGACGTGGGCATGGGC
TTCGACAAGCAGGATCTTCCGCCGCCCTCTTTCGAGGCAGCCATTGCCAC
GGGCGCCATCAAACTGGACGATCTCACGCCCTCCGAACTGATTGGCATCT
ATGATGCTCTGTTTTCCTGCCTGGTGTCCTGGCTGGAGGGCAACTCCATG
GACCAGGTTCTATTCACCTGCCTCTACCTGCACGCTCCCGCACAGATCAA
GGATAAGGCGCTGCGCGTCTTCTGCACTGCCGTGCGCAATCTCATCGTGG
TCATCAAGAAAATTATTGCCGTGGCAGCTGTCAACGAGGAGGAGGACTTC
CAGCTGTACGGAAATTCTGCTCTTCTGGCTGCAGAGAAGGCACAGCCAGC
CACTGTTTATAGCTCGCTAAAGGATGTGGAGGATGAGCTCATACGCAAGT
GCAAAAAGCTGACTTCCACGGAGGACTGGATGGCCGTGGTTCACCGGCTG
CGTTTCATGCGCCATCTTTTCCAGGTGATCTACCACGTGGAGCAAATGGC
CAGCAATGATACCGTCGATGACAAGGTAGACATATACAAAATCCTGCTTG
TGGCCTCCGAGATGCTTCCAGGAATAAGGAACACTTTGGATCGGGGCACA
CAACCAGAGAAGGGGTCTGACGCTCCCAATCCCATGGGTTTCTCTCCGCG
CATCCACGACCGCAGCCAACCGCCCGCGTTTCCGCGTAGCATTAAGATCA
GGGATCGTCCATCCAGTTATCAGTTTCTAGAGGAAATGATTTCGCGCTTC
AAATACGCCTGCAAAGTCACCAAGTACAAGGATTACTATTCGGCGCTGAA
CTTCTTTATCGAGTACAGCAAAAAGTCGGGCCAGTGCATCCTGTCCAGAA
GCGTGCTGCAAACCCTGTTCAGCGCCAACATGCGTATGGCGCACGGAAAG
CTTCCCATGAAGCAGTTCCTGCGCCACTCGGTTCAGGTCTTCAACTCGCC
ACCCGTATTGAATGCCAAGCATCCGGTGGCTGCCGATCCCAAGGTGCAGC
AGCACCTGGAGAACTTCTTCCGTTACTGCATTAACATGAACACCTTCACG
CAGTTCATTCGCATCTGCGGCTTCAATCGCGCCAGACAGCGGGATAAGCT
GGCGCGTCTGATAGAGAACTTCGACACCATCCAAGTGGATGCAGCGCGAT
TGGACTCTATGATGAACCAACTGGCCAACGAACGAGCCATGGAGGGCAAC
GAGCCCATGGCCACCGCTCTGAAGCACAGCACCCACTTCTCCACATGGGT
GCTGTACAACTGTTTCCGTGCGATGCTGATCTTCCTGATGTCCGGCTTTG
AGCTGGAACTATATGCTGTGCATGAGTTCCTCTACATCTACTGGTATCCA
TACGAGTTCCTCATTGGCTTCCTGGTCTCCGCGCTGACGCGCACGGAGAA
CATCCTCCTGGCCCAGGAGGAGTACGCCGAGCACCAAAGTAAGACCCAGT
CGGGCGGCAGCGGAGCGGCTAAAAACCGCAAGGCGGCCAAGCCGAAAAAG
AACAAAAAGACTCAAAGGCCGTACCGCGCCGAGATCGTCTTCTACCACGC
GCTACTCAGCCTCTGCGGCGGAATGTATAAAGCAATGGGCGCCCTGACCA
AAGACGGACGCGTGCGACTGCCGCTGTCCAAGTTCGACAACGAGGAGATC
CGCTACAACCGACGCTTCCTGCCCTTCGCCACACTCACCAGTCCTCCGCC
AGTTTCGTACGCAGAGTTCAAAAACGTCCGGGAGCACATGATGCGACATA
GCGTCGAGGATCTATATACCTATGCGGCCAAGCACTTTGACCAGGCCCGC
AATGTTCTCGAAAGCATTCAAAACCCAGATCAGGAGATGCTGGACCTCCT
GCAAATCGCACGGACTAACTTTGTGGTGATGAATGTGCTGGCCCGCGGTC
ACCAGAAGGAAGTCAAGCGGCAGCCAGAGTTCGACTTCTCCAAACACAGC
TACTTCCCCATCATCAAGCTGAAGTAAATGTTCACGTGTTTCGTAATTGA
CAAGAATAAAATTTAAATGTACGCAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA

FI19334.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 20021417..20022455 2336..1298 5195 100 Minus
chr2R 21145070 chr2R 20022755..20023322 1116..549 2840 100 Minus
chr2R 21145070 chr2R 20023386..20023757 548..177 1860 100 Minus
chr2R 21145070 chr2R 20021167..20021356 2524..2335 950 100 Minus
chr2R 21145070 chr2R 20022513..20022694 1298..1117 910 100 Minus
chr2R 21145070 chr2R 20023848..20024025 178..1 890 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:19:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24135430..24136468 2336..1298 5195 100 Minus
2R 25286936 2R 24136768..24137335 1116..549 2840 100 Minus
2R 25286936 2R 24137399..24137770 548..177 1860 100 Minus
2R 25286936 2R 24135179..24135369 2525..2335 940 99.5 Minus
2R 25286936 2R 24136526..24136707 1298..1117 910 100 Minus
2R 25286936 2R 24137861..24138038 178..1 890 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:19:57 has no hits.

FI19334.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:20:35 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 20021167..20021354 2337..2524 100 <- Minus
chr2R 20021417..20022454 1299..2336 100 <- Minus
chr2R 20022513..20022694 1117..1298 100 <- Minus
chr2R 20022755..20023322 549..1116 100 <- Minus
chr2R 20023386..20023755 179..548 100 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-17 12:11:28 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
CG4065-RB 1..2352 126..2477 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:11:08 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
CG4065-RB 1..2352 126..2477 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:28:24 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
CG4065-RB 1..2352 126..2477 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-17 12:11:28 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
CG4065-RB 1..2524 1..2524 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:11:08 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
CG4065-RB 13..2536 1..2524 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:28:24 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
CG4065-RB 13..2536 1..2524 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:35 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24137861..24138038 1..178 100   Minus
2R 24135180..24135367 2337..2524 99 <- Minus
2R 24135430..24136467 1299..2336 100 <- Minus
2R 24136526..24136707 1117..1298 100 <- Minus
2R 24136768..24137335 549..1116 100 <- Minus
2R 24137399..24137768 179..548 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:35 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24137861..24138038 1..178 100   Minus
2R 24135180..24135367 2337..2524 99 <- Minus
2R 24135430..24136467 1299..2336 100 <- Minus
2R 24136526..24136707 1117..1298 100 <- Minus
2R 24136768..24137335 549..1116 100 <- Minus
2R 24137399..24137768 179..548 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:35 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24137861..24138038 1..178 100   Minus
2R 24135180..24135367 2337..2524 99 <- Minus
2R 24135430..24136467 1299..2336 100 <- Minus
2R 24136526..24136707 1117..1298 100 <- Minus
2R 24136768..24137335 549..1116 100 <- Minus
2R 24137399..24137768 179..548 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:11:08 Download gff for FI19334.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20022703..20022890 2337..2524 99 <- Minus
arm_2R 20022953..20023990 1299..2336 100 <- Minus
arm_2R 20024049..20024230 1117..1298 100 <- Minus
arm_2R 20024291..20024858 549..1116 100 <- Minus
arm_2R 20024922..20025291 179..548 100 <- Minus
arm_2R 20025384..20025561 1..178 100   Minus

FI19334.hyp Sequence

Translation from 125 to 2476

> FI19334.hyp
MYPSTLPAEADPSTMNGSVAEPPDFQAATAAAAAAARASSLEQDEWSVGE
CGFLDPDVQRTMRSGSAAEDITQYPMHGWVDVTKEFHDACAELQPGELAQ
DMLFGLFEAMSAIEIMDPKMDVGMGFDKQDLPPPSFEAAIATGAIKLDDL
TPSELIGIYDALFSCLVSWLEGNSMDQVLFTCLYLHAPAQIKDKALRVFC
TAVRNLIVVIKKIIAVAAVNEEEDFQLYGNSALLAAEKAQPATVYSSLKD
VEDELIRKCKKLTSTEDWMAVVHRLRFMRHLFQVIYHVEQMASNDTVDDK
VDIYKILLVASEMLPGIRNTLDRGTQPEKGSDAPNPMGFSPRIHDRSQPP
AFPRSIKIRDRPSSYQFLEEMISRFKYACKVTKYKDYYSALNFFIEYSKK
SGQCILSRSVLQTLFSANMRMAHGKLPMKQFLRHSVQVFNSPPVLNAKHP
VAADPKVQQHLENFFRYCINMNTFTQFIRICGFNRARQRDKLARLIENFD
TIQVDAARLDSMMNQLANERAMEGNEPMATALKHSTHFSTWVLYNCFRAM
LIFLMSGFELELYAVHEFLYIYWYPYEFLIGFLVSALTRTENILLAQEEY
AEHQSKTQSGGSGAAKNRKAAKPKKNKKTQRPYRAEIVFYHALLSLCGGM
YKAMGALTKDGRVRLPLSKFDNEEIRYNRRFLPFATLTSPPPVSYAEFKN
VREHMMRHSVEDLYTYAAKHFDQARNVLESIQNPDQEMLDLLQIARTNFV
VMNVLARGHQKEVKRQPEFDFSKHSYFPIIKLK*

FI19334.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG4065-PB 783 CG4065-PB 1..783 1..783 4073 100 Plus
CG4065-PA 784 CG4065-PA 1..784 1..783 4061 99.9 Plus

FI19334.pep Sequence

Translation from 125 to 2476

> FI19334.pep
MYPSTLPAEADPSTMNGSVAEPPDFQAATAAAAAAARASSLEQDEWSVGE
CGFLDPDVQRTMRSGSAAEDITQYPMHGWVDVTKEFHDACAELQPGELAQ
DMLFGLFEAMSAIEIMDPKMDVGMGFDKQDLPPPSFEAAIATGAIKLDDL
TPSELIGIYDALFSCLVSWLEGNSMDQVLFTCLYLHAPAQIKDKALRVFC
TAVRNLIVVIKKIIAVAAVNEEEDFQLYGNSALLAAEKAQPATVYSSLKD
VEDELIRKCKKLTSTEDWMAVVHRLRFMRHLFQVIYHVEQMASNDTVDDK
VDIYKILLVASEMLPGIRNTLDRGTQPEKGSDAPNPMGFSPRIHDRSQPP
AFPRSIKIRDRPSSYQFLEEMISRFKYACKVTKYKDYYSALNFFIEYSKK
SGQCILSRSVLQTLFSANMRMAHGKLPMKQFLRHSVQVFNSPPVLNAKHP
VAADPKVQQHLENFFRYCINMNTFTQFIRICGFNRARQRDKLARLIENFD
TIQVDAARLDSMMNQLANERAMEGNEPMATALKHSTHFSTWVLYNCFRAM
LIFLMSGFELELYAVHEFLYIYWYPYEFLIGFLVSALTRTENILLAQEEY
AEHQSKTQSGGSGAAKNRKAAKPKKNKKTQRPYRAEIVFYHALLSLCGGM
YKAMGALTKDGRVRLPLSKFDNEEIRYNRRFLPFATLTSPPPVSYAEFKN
VREHMMRHSVEDLYTYAAKHFDQARNVLESIQNPDQEMLDLLQIARTNFV
VMNVLARGHQKEVKRQPEFDFSKHSYFPIIKLK*

FI19334.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20517-PA 773 GF20517-PA 1..773 15..783 3679 90.3 Plus
Dana\GF13474-PA 236 GF13474-PA 1..236 550..783 1125 93.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19948-PA 784 GG19948-PA 1..784 1..783 4145 97.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21912-PA 781 GH21912-PA 1..781 15..783 3326 81.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
Naa35-PB 783 CG4065-PB 1..783 1..783 4073 100 Plus
Naa35-PA 784 CG4065-PA 1..784 1..783 4061 99.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19262-PA 800 GI19262-PA 50..800 39..783 3360 83.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10417-PA 779 GL10417-PA 1..779 15..783 3414 82 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17930-PA 779 GA17930-PA 1..779 15..783 3400 81.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:33:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18267-PA 784 GM18267-PA 1..784 1..783 4200 98.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24970-PA 784 GD24970-PA 1..784 1..783 4216 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:33:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22137-PA 802 GJ22137-PA 51..802 38..783 3369 83.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:33:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23196-PA 785 GK23196-PA 1..785 15..783 3477 82.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:33:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11478-PA 784 GE11478-PA 1..784 1..783 4168 97.8 Plus