Clone FI19335 Report

Search the DGRC for FI19335

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:193
Well:35
Vector:pOTB7
Associated Gene/TranscriptCG3515-RA
Protein status:FI19335.pep: gold
Sequenced Size:1551

Clone Sequence Records

FI19335.complete Sequence

1551 bp assembled on 2012-01-13

GenBank Submission: BT133020.1

> FI19335.complete
CAAAATGACAGATTGAAATAATTTTAATGACAGGCCTTAACATCACATTC
TTATTGAAGCTCATTTTCTCACAGTACATATTTAAAGGAAATGTCTATCA
GACTGAACGATGACGCGATGCGGCAGTTCCGGGTGGCCAAGGTGTTCCCG
GAGACAAAGCACCACACGCTTGCAATGGAGTTCTCCTCGGACGGACTGCG
CCTGCTGGTCTGCGACCACTCCGCCCTCTCGATCTTCAGCAGCACTCGAC
AGGTGCAGGTCTGCAAGGTGCCTATGCACCACTACCTGCCCGACGTGGCC
TGCTTCGTCCAGCAGGACACTCGCGTCCTGCACTCCACCTCAAAGCATGA
CTACACCATCCGATGCCTGGACCTTAATACCCGCCACTGCGTTCGAGTTT
TCGGTGGCCATGCAAAGACTATCAATAGGCTGGCCTCCCAGCCTGGAGGC
GAGAATGTGTTCATCAGTGCCGGGCGGGATGATCAGGTTTACATGTGGGA
CATTCGGGTCAAAACTCACACACACCGCATAAAGAATCTGCGACGGCCAC
TGTGCGCTTTTGATCCTGAGGGCTTGTTCCTGGCCACCAGTTCGGGCACG
GAGGGCATCCAGATCCGCGATGTGAGGATGATGGGCGGTGAGCCGAGCCG
AAAGTTCGTATACCAGGTGAACGCCAAGGCCAATTGGACACAGTTGCAGT
TCGCTCCCAACGGGAAGAGCCTGCTGCTGAGCACGGATCACTCCTGGTGC
TTCAGTGTCTCGGCCATTGATGGTACCTACCAACAGTCCTTTACTGGCTA
TTCGAATAAGTTAAGGCTGCCGTTGGATGCCACTTACACGCCGGACTCGC
AGTTCATCCTTTCGGGAGCGGATAAGGGCAGGATTCACATTTGGCGCGCT
GCCGATGGATTTCCTGTGGCAGTCCTTAAGGGCAACAATATGGGTCCTGT
TCGATGCATGCGCTTCAATCCGAGAGCCACCATGTTCGTGAGCAGCGACT
CACGAATCGTGTTCTGGATGCCCATGGCGAATGGAGTTTACGATTGGGTG
AAACGCCTGAAGCCCGGCGAAACTATCTCCTTTACGGACGAAACTGTACA
GGAGGAGGCTGTCAAGGCTCCTAGGACGATTCCTATGCCCAAGCCCAAAA
TTGAAACGGTATGGAAAATAAAGAGACTGAACAGAAAGAGAGCTTGCACA
GGAGATGAAATAGTTGATCTCACCAATGCCCTACACAATAATGACTCCAT
GGAAGATGGCGAAATAGCCGAAGACTAAAATGTATACCGATCTCTTGGTA
GAATAAAGGCACGGGTTGTTCATCAGCTGGCTGCTGGCCAAAAGTTTGCA
GACCAACTCGCAGCTGGGTATCACCCAAACTTCCTGGCCAGTCCTTATGC
TTTTGAGACACAAATTGTTGAGTTTTGCCAGCAAATTGCACAGCTGGCTG
CGTTCGACTCCGAAAAGGAGTTCCTGGTGTGGTGTGCAAACTTTTGGCCA
AGTTTCGGCTGTGTGTATATGTTCTCCTGCAAAAAAAAAAAAAAAAAAAA
A

FI19335.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2550912..2552098 1530..344 5920 99.9 Minus
chr2L 23010047 chr2L 2552267..2552611 345..1 1725 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2551144..2552331 1531..344 5880 99.7 Minus
2L 23513712 2L 2552500..2552844 345..1 1725 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:23:38 has no hits.

FI19335.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:24:20 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2550912..2552096 346..1530 99 <- Minus
chr2L 2552267..2552611 1..345 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-13 10:49:57 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
CG3515-RA 1..1188 91..1278 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:57 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
CG3515-RA 1..1188 91..1278 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:58:10 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
CG3515-RA 1..1188 91..1278 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-13 10:49:56 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
CG3515-RA 1..1530 1..1530 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:57 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
CG3515-RA 1..1511 20..1530 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:58:10 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
CG3515-RA 1..1511 20..1530 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:20 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2551145..2552329 346..1530 99 <- Minus
2L 2552500..2552844 1..345 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:20 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2551145..2552329 346..1530 99 <- Minus
2L 2552500..2552844 1..345 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:20 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2551145..2552329 346..1530 99 <- Minus
2L 2552500..2552844 1..345 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:57 Download gff for FI19335.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2551145..2552329 346..1530 99 <- Minus
arm_2L 2552500..2552844 1..345 100   Minus

FI19335.hyp Sequence

Translation from 90 to 1277

> FI19335.hyp
MSIRLNDDAMRQFRVAKVFPETKHHTLAMEFSSDGLRLLVCDHSALSIFS
STRQVQVCKVPMHHYLPDVACFVQQDTRVLHSTSKHDYTIRCLDLNTRHC
VRVFGGHAKTINRLASQPGGENVFISAGRDDQVYMWDIRVKTHTHRIKNL
RRPLCAFDPEGLFLATSSGTEGIQIRDVRMMGGEPSRKFVYQVNAKANWT
QLQFAPNGKSLLLSTDHSWCFSVSAIDGTYQQSFTGYSNKLRLPLDATYT
PDSQFILSGADKGRIHIWRAADGFPVAVLKGNNMGPVRCMRFNPRATMFV
SSDSRIVFWMPMANGVYDWVKRLKPGETISFTDETVQEEAVKAPRTIPMP
KPKIETVWKIKRLNRKRACTGDEIVDLTNALHNNDSMEDGEIAED*

FI19335.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG3515-PA 395 CG3515-PA 1..395 1..395 2104 100 Plus
Wdr82-PA 317 CG17293-PA 1..311 1..311 532 36.2 Plus

FI19335.pep Sequence

Translation from 90 to 1277

> FI19335.pep
MSIRLNDDAMRQFRVAKVFPETKHHTLAMEFSSDGLRLLVCDHSALSIFS
STRQVQVCKVPMHHYLPDVACFVQQDTRVLHSTSKHDYTIRCLDLNTRHC
VRVFGGHAKTINRLASQPGGENVFISAGRDDQVYMWDIRVKTHTHRIKNL
RRPLCAFDPEGLFLATSSGTEGIQIRDVRMMGGEPSRKFVYQVNAKANWT
QLQFAPNGKSLLLSTDHSWCFSVSAIDGTYQQSFTGYSNKLRLPLDATYT
PDSQFILSGADKGRIHIWRAADGFPVAVLKGNNMGPVRCMRFNPRATMFV
SSDSRIVFWMPMANGVYDWVKRLKPGETISFTDETVQEEAVKAPRTIPMP
KPKIETVWKIKRLNRKRACTGDEIVDLTNALHNNDSMEDGEIAED*

FI19335.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20601-PA 412 GF20601-PA 1..374 1..366 1175 59.1 Plus
Dana\GF15223-PA 317 GF15223-PA 1..313 1..313 542 35.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24512-PA 394 GG24512-PA 1..394 1..395 1648 77.2 Plus
Dere\GG10542-PA 317 GG10542-PA 1..313 1..313 542 35.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:32:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11495-PA 419 GH11495-PA 7..318 3..314 816 46.8 Plus
Dgri\GH10840-PA 317 GH10840-PA 1..313 1..313 542 35.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:19:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG3515-PA 395 CG3515-PA 1..395 1..395 2104 100 Plus
Wdr82-PA 317 CG17293-PA 1..311 1..311 532 36.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16991-PA 394 GI16991-PA 1..358 1..351 818 45.3 Plus
Dmoj\GI17354-PA 317 GI17354-PA 1..313 1..313 545 35.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:32:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14445-PA 317 GA14445-PA 1..313 1..313 542 35.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:32:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18220-PA 395 GM18220-PA 1..395 1..395 1880 87.8 Plus
Dsec\GM16920-PA 317 GM16920-PA 1..313 1..313 551 36 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:32:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22827-PA 395 GD22827-PA 1..395 1..395 1924 89.6 Plus
Dsim\GD23532-PA 317 GD23532-PA 1..313 1..313 551 36 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24160-PA 390 GJ24160-PA 1..352 3..350 829 43.3 Plus
Dvir\GJ16174-PA 317 GJ16174-PA 1..313 1..313 542 35.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24839-PA 317 GK24839-PA 1..311 1..311 542 35.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:32:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15087-PA 395 GE15087-PA 1..395 1..395 1758 80.8 Plus
Dyak\GE18763-PA 317 GE18763-PA 1..313 1..313 542 35.7 Plus