Clone FI19338 Report

Search the DGRC for FI19338

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:193
Well:38
Vector:pOTB7
Associated Gene/TranscriptCG15459-RA
Protein status:FI19338.pep: gold
Sequenced Size:1110

Clone Sequence Records

FI19338.complete Sequence

1110 bp assembled on 2012-01-06

GenBank Submission: BT132980.1

> FI19338.complete
GCTGCTTGTCATTAGGTTCTCGCTCGGAGCTATAGGCAGAACACACTCAG
CTCTCACCCGGACCCGACCCCAAATCCAGATCTCCAGATCCAGTCCAGTA
GCAATGGCCGACGGCTTTAAGAAGTACTTCAATGGGACAACCATCAATGG
ACGCGCTAACGTGGCAAAGGCCACATACGCCACGTTGGCCCTGTTGTTCA
TCGTGTACAAGCTGCGCCGCGGATCCGGCAAGACCGGCGAGTTGGCCAGC
GGCAAGTGCAGCTGCGAATCGGACCACGAGTCGTCCCTCAATGGCGACAT
TGGCGTCTACGGCGCGGATCCCGACTGCTCCGTTTGCCGGGAGCGATCGG
AGCGGGCCATGACCGAGTTCGATCGCGAGCAGCAGCGCCGGGCGGCGGGC
GAGGATGACAATGGTTGTCGCGACGATCCGCCGCCGCCACCACCTCCGCC
CACATCGGGAGGATCAGGCTCTGCTCCGCGGCGCAAGTGTCCCTGCGAGG
AGCCGCAGCGTCGGGCGGAGGGAGCCGTGAAGCATAGCAGCCACAGCAGC
TGGGCGCGAGGCCAGCAGATTCAGCCGCCAAACCAGTACCAACAGTATAA
ACAGCCCGAGGCGGAGCAAGTGCGTCCGGCTAGCCAAGTGATGGGTCAGG
TGCACGACGCCTTCTACAGGGTGCTGCGAGGAGTCGTGGGAGCCGTTTTG
GGCAATGCGGCGGTCAACACCAGCGGCACCGCTTCCGATTCCCCAGCTCA
GGCAGCCGCAGTGGAAGTCTCGCGGGATGAGCTGGACGAGGATGAACGTG
ACGACGGCCAGGACGATGAGACGCCGTTAAAGCGCCGCACGGCACCGCGC
TCTTGCGTGCCCACAGGCAGCCAAGAGAACGCCTCGGGACAGCCGGAGGA
ACTGGGCCGGGAACAGGCCGACGACCAGCCGCAGGCGGAGGAGCAGGCGG
AGTACAGCGCGTTCAGCGATGGCTTCACTTCCGGCCTGTCCTTTACCAGC
GATGAAAAGTAGTTGGCTAGGTCTGGGCGTAGGCTTCAAGAGATCTGCTA
AATTTTTAGTCTAAAATAAATACGAAGAACTTCTTTATCTCAAAAAAAAA
AAAAAAAAAA

FI19338.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:14:30
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 20277812..20278742 1091..161 4655 100 Minus
chrX 22417052 chrX 20278910..20279079 162..1 695 95.3 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20412340..20413271 1092..161 4660 100 Minus
X 23542271 X 20413439..20413608 162..1 695 95.3 Minus
Blast to na_te.dros performed 2019-03-15 12:14:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6813..6884 536..605 139 68.1 Plus

FI19338.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:15:11 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 20277812..20278742 161..1091 100 <- Minus
chrX 20278912..20279079 1..160 95   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-06 15:27:10 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 1..909 104..1012 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:55:55 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 1..909 104..1012 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:56:20 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 1..909 104..1012 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-06 15:27:10 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 1..1099 1..1091 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:55:55 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 1..1072 28..1091 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:56:20 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
CG15459-RA 1..1072 28..1091 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:15:11 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
X 20413441..20413608 1..160 95   Minus
X 20412341..20413271 161..1091 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:15:11 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
X 20413441..20413608 1..160 95   Minus
X 20412341..20413271 161..1091 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:15:11 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
X 20413441..20413608 1..160 95   Minus
X 20412341..20413271 161..1091 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:55:55 Download gff for FI19338.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20283368..20284298 161..1091 100 <- Minus
arm_X 20284468..20284635 1..160 95   Minus

FI19338.pep Sequence

Translation from 1 to 1011

> FI19338.pep
LLVIRFSLGAIGRTHSALTRTRPQIQISRSSPVAMADGFKKYFNGTTING
RANVAKATYATLALLFIVYKLRRGSGKTGELASGKCSCESDHESSLNGDI
GVYGADPDCSVCRERSERAMTEFDREQQRRAAGEDDNGCRDDPPPPPPPP
TSGGSGSAPRRKCPCEEPQRRAEGAVKHSSHSSWARGQQIQPPNQYQQYK
QPEAEQVRPASQVMGQVHDAFYRVLRGVVGAVLGNAAVNTSGTASDSPAQ
AAAVEVSRDELDEDERDDGQDDETPLKRRTAPRSCVPTGSQENASGQPEE
LGREQADDQPQAEEQAEYSAFSDGFTSGLSFTSDEK*

FI19338.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:29:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19492-PA 339 GF19492-PA 1..339 35..336 723 52.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:29:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17994-PA 293 GG17994-PA 1..293 35..336 1083 82.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:29:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22901-PA 284 GH22901-PA 1..229 35..290 252 33.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG15459-PA 302 CG15459-PA 1..302 35..336 1596 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16242-PA 324 GI16242-PA 1..277 35..315 317 37.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:29:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26794-PA 302 GL26794-PA 1..287 35..300 474 43.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:29:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22675-PA 298 GM22675-PA 1..298 35..336 1332 94.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:29:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24444-PA 302 GD24444-PA 1..302 35..336 1371 95.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:29:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15934-PA 319 GJ15934-PA 3..244 36..290 331 39 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:29:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19721-PA 327 GK19721-PA 1..322 35..331 444 38.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:29:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15351-PA 302 GE15351-PA 1..302 35..336 1310 89.1 Plus

FI19338.hyp Sequence

Translation from 103 to 1011

> FI19338.hyp
MADGFKKYFNGTTINGRANVAKATYATLALLFIVYKLRRGSGKTGELASG
KCSCESDHESSLNGDIGVYGADPDCSVCRERSERAMTEFDREQQRRAAGE
DDNGCRDDPPPPPPPPTSGGSGSAPRRKCPCEEPQRRAEGAVKHSSHSSW
ARGQQIQPPNQYQQYKQPEAEQVRPASQVMGQVHDAFYRVLRGVVGAVLG
NAAVNTSGTASDSPAQAAAVEVSRDELDEDERDDGQDDETPLKRRTAPRS
CVPTGSQENASGQPEELGREQADDQPQAEEQAEYSAFSDGFTSGLSFTSD
EK*

FI19338.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG15459-PA 302 CG15459-PA 1..302 1..302 1596 100 Plus