Clone FI19409 Report

Search the DGRC for FI19409

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:9
Vector:pOT2
Associated Gene/TranscriptCG8135-RA
Protein status:FI19409.pep: gold
Sequenced Size:2838

Clone Sequence Records

FI19409.complete Sequence

2838 bp assembled on 2012-02-09

GenBank Submission: BT133230.1

> FI19409.complete
CCACGCACACGTTCACACTTTTTGATAAAGTCGATTGATTTGATTGACCG
AGAAAAAAAAACAAATAAACACAACGAAGGTGAACTGGTACCGGCGTAGT
GAAGATACCACCAACGCCAGCTCCCAACACATCCCGGCCACGCCCCCCGA
CCGCCCGCGGAGCTCCAAAGGATGTCCTCAGTGGAGGCCGAGGTGCTGCA
GAAAATCGATCTGATTGAGCCCACAACCGGAAAATTGTTTTTCGAGCACA
AAACGGAGCTGCTTTTCTGCCGGCCACATCTGATGCCGCTAAAGACGCAG
GCGCTGGAACGCCTGGAGGAAATGCATCGGGACACCGCTCGCCAATTGCA
GAAGAAGCGCCAGCAGAAGAAGAAGTCCACGGAGCCCACAGGCTCGCTAT
GAACCAGTCCTTAATCGCAGAAATACATTTGTTATAAGCACATACACCCA
CACGCACGCACCACAAATACACAGAATCACAGCAAAGCACAAGAACTGAG
TACACCCGTACCAGGATCGGGATCGGGATAAGCACTAGTCACAATGGCGT
ACCTACTAAGCTTTGGCATCGTGGCCGCCCTATTCCTGGCCAGCATCTCG
CTGTACCGTTACGGAAACATACCACGTCAGCACATCCTGGTCACCCTGTC
CGTGCTGACCGCCTGGTGTTTCTCCTTTCTAATTGTATTCACCATTCCGC
TGGACGTGACATCGACGCTTTACCGGCAGTGCGTGGAGGAGCACCGACCG
ACCCCAGCCCCAAATGTGACCAACACGTCGAGCGCCACGGTGGGTCCGCC
GCCTCAGTGCCAGGAACCGTGGGGCATGGTGCCCGCCTCCGTGTTCCCAA
ACCTCTGGCGCATTATTTACTGGAGCTCACAGTTCCTCACCTGGTTGATT
ATGCCGCTGATGCAGTCGTACCTTAAGGCGGGCGACTTCACCGTCAAGGG
AAAACTTAAATCGGCACTGATAGAGAATGCCATCTACTACGGTTCCTACC
TGTTCATCTGTGGCGTACTACTCATCTATATTGCCGTCAAAGGAGAGTCT
CTGGATTGGCAAAAGCTCAAGGCAATTGCCTCGTCCGCATCGAACACATG
GGGATTGTTTCTGCTCATCCTGTTACTGGGATATGCTCTGGTGGAGGTAC
CTCGATCGTTGTGGAACAACGCCAAGCCGGGATTTGCACTGCAATATGCC
TACTTCAAGGCAGCCAAATTGAGCACTGAGAAGGCCGAGGCTGAGGAGCA
TGTGGATGATATCCTTGAGTCGCTGCAAGGCCTTAGCCGCGTCATACCCA
ACAATCACGAGTTGCGCCCCTGCCTGGAGACCATTCTGCGCAAGGTTCCC
ATTGAGCTGCAAGAGCGAGCGAGTCGAAACTTTGCGCGCACTGGAGGCAG
CGGCATGGGTGCCACGAGTTCCACTATCTTGCCTTCGGAAAAGGCGCTGG
TTCGCATTCATAAGCAAGTAATCAAATCGCTGCAAACATTGCAGCGCACC
GAAGCGCTATGGAGCGTGCAGGTGCAGACAGTGCTGCATCTGGAGGATGT
GGCCAAGAATATACACTCTTCGGACCGGCGCTTCAAATCTGAGTTTCCGC
GCCAGCGCACGCAGCTGGAGAGGATCTGCTACAGCGCCTCGCTGCAGTGG
TACTGGGAGTGCCTGCTAAAGGCTCCGTTCCTCAAGACCATGTGCGTTCT
GACCGCCACCATGTCGGCCATGGTGGTGTGGAGCGAGCTTACCTTCTTCA
GTCGCCACCCTGTGCTTTCCATATTCGCCAACGTTATCTACGTGGCCAAG
GAGAGCTACGACTTCTTTACTATTGAAGTCTTCTCTATGGTTGTTCTATG
CTACTTCTTCTACTGCACTTACTCCACGATCTTGAGGATACGCTTCCTTA
ATCTCTACTACCTGGCACCGCATCACCAGACCAACGAGCACAGTCTGATC
TTCAGCGGCATGCTGCTGTGCCGTCTGACACCACCCATGTGCCTCAACTT
CCTGGGTCTCATCCATATGGACACACACATTATTCCCAACCGCATTATGG
AGACGGTGTACACGCAGATCATGGGCCACATGGATGTTATTGGCATCATC
TCGAACGGCTTCAATATCTACTTCCCAATGTGTATGCTGGCCTTCTGTCT
GGCCACTTGGTTTAGCCTCGGCAGTCGGGCACTGAATGCTCTCGGCTTCC
AGCAGTTCCTGCAAAACGAAACTATTGCTACCGAACTGGTGCAGGAGGGA
AAGGATCTTATAGCGCGGGAAAAGCGCCGCCGCCAGCGTGCCGAGGAGGC
GATGGCCAGACGCCGTGACTTCAACCGAACCGATCAGGTTCTGGGCAGCG
ATTACTTGAGCAAATACCGGAGTGGTGGACCCGGTGGACTAACCAGTAGT
CGCACGCCCGCCGACGGGCTGCTGCGCGATGGCGACGGCAGCTTTGACTA
TGCGGCAGTGGCTTCTTCCTCTGCACTGGGCGTACCGCGATCCCTGTCGG
AGGAGATCAACGACCGTTTCGGTGTGAGCACTCAGGTGCAGGTGGGATTC
CGAGACCCCGACTACGAGGCGGAGACAGATGGTCGAATTGTCGGCCCACC
ACCCCGAGGACTCTTCGACGATGTCTAGACTTTGGATATGGATAACTCTT
TATTTCAATTCGTTACCGAGTATCTCAATATTTCGCTCGCGCTTAAGTAT
TTCCCGATGCCACTGCTGCTGCTGCTGTTCCTTTACACCCATGTAGACCA
TTCAGTTGAATAAACCACTAAAGAGGAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI19409.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:16:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5231568..5232894 714..2040 6620 99.9 Plus
chr3R 27901430 chr3R 5232945..5233690 2031..2776 3685 99.6 Plus
chr3R 27901430 chr3R 5230209..5230922 1..714 3555 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:15:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9405735..9407061 714..2040 6635 100 Plus
3R 32079331 3R 9407112..9407858 2031..2777 3690 99.6 Plus
3R 32079331 3R 9404376..9405089 1..714 3570 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:16:00 has no hits.

FI19409.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:16:42 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5230209..5230922 1..714 99 -> Plus
chr3R 5231569..5232894 715..2040 99 -> Plus
chr3R 5232955..5233690 2041..2776 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-09 19:09:48 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
CG8135-RA 1..2085 544..2628 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:10:07 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
CG8135-RA 1..2085 544..2628 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:26:52 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
CG8135-RA 1..2085 544..2628 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-09 19:09:48 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
CG42511-RA 2..2777 1..2776 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:10:07 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
CG8135-RA 1..2767 10..2776 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:26:52 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
CG8135-RA 1..2767 10..2776 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:42 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9404376..9405089 1..714 100 -> Plus
3R 9405736..9407061 715..2040 100 -> Plus
3R 9407122..9407857 2041..2776 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:42 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9404376..9405089 1..714 100 -> Plus
3R 9405736..9407061 715..2040 100 -> Plus
3R 9407122..9407857 2041..2776 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:42 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9404376..9405089 1..714 100 -> Plus
3R 9405736..9407061 715..2040 100 -> Plus
3R 9407122..9407857 2041..2776 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:10:07 Download gff for FI19409.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5230098..5230811 1..714 100 -> Plus
arm_3R 5231458..5232783 715..2040 100 -> Plus
arm_3R 5232844..5233579 2041..2776 100   Plus

FI19409.pep Sequence

Translation from 543 to 2627

> FI19409.pep
MAYLLSFGIVAALFLASISLYRYGNIPRQHILVTLSVLTAWCFSFLIVFT
IPLDVTSTLYRQCVEEHRPTPAPNVTNTSSATVGPPPQCQEPWGMVPASV
FPNLWRIIYWSSQFLTWLIMPLMQSYLKAGDFTVKGKLKSALIENAIYYG
SYLFICGVLLIYIAVKGESLDWQKLKAIASSASNTWGLFLLILLLGYALV
EVPRSLWNNAKPGFALQYAYFKAAKLSTEKAEAEEHVDDILESLQGLSRV
IPNNHELRPCLETILRKVPIELQERASRNFARTGGSGMGATSSTILPSEK
ALVRIHKQVIKSLQTLQRTEALWSVQVQTVLHLEDVAKNIHSSDRRFKSE
FPRQRTQLERICYSASLQWYWECLLKAPFLKTMCVLTATMSAMVVWSELT
FFSRHPVLSIFANVIYVAKESYDFFTIEVFSMVVLCYFFYCTYSTILRIR
FLNLYYLAPHHQTNEHSLIFSGMLLCRLTPPMCLNFLGLIHMDTHIIPNR
IMETVYTQIMGHMDVIGIISNGFNIYFPMCMLAFCLATWFSLGSRALNAL
GFQQFLQNETIATELVQEGKDLIAREKRRRQRAEEAMARRRDFNRTDQVL
GSDYLSKYRSGGPGGLTSSRTPADGLLRDGDGSFDYAAVASSSALGVPRS
LSEEINDRFGVSTQVQVGFRDPDYEAETDGRIVGPPPRGLFDDV*

FI19409.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:30:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17212-PA 695 GF17212-PA 1..695 1..694 3343 90.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:30:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16765-PA 694 GG16765-PA 1..694 1..694 3679 98.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:30:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18433-PA 723 GH18433-PA 1..723 1..694 3111 82.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG8135-PA 694 CG8135-PA 1..694 1..694 3612 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:30:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24009-PA 715 GI24009-PA 1..715 1..694 3154 83.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:30:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13821-PA 699 GL13821-PA 1..699 1..694 3322 89.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20843-PA 699 GA20843-PA 1..699 1..694 3322 89.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23803-PA 694 GM23803-PA 1..694 1..694 3695 98.8 Plus
Dsec\GM25049-PA 174 GM25049-PA 1..174 521..694 911 97.7 Plus
Dsec\GM23983-PA 91 GM23983-PA 1..77 1..77 301 77.9 Plus
Dsec\GM13126-PA 91 GM13126-PA 1..77 1..77 301 77.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:31:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18614-PA 694 GD18614-PA 1..694 1..694 3707 99.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:31:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23639-PA 716 GJ23639-PA 1..716 1..694 3188 84.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10955-PA 712 GK10955-PA 1..712 1..694 3089 85.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:31:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25949-PA 694 GE25949-PA 1..694 1..694 3701 99 Plus

FI19409.hyp Sequence

Translation from 543 to 2627

> FI19409.hyp
MAYLLSFGIVAALFLASISLYRYGNIPRQHILVTLSVLTAWCFSFLIVFT
IPLDVTSTLYRQCVEEHRPTPAPNVTNTSSATVGPPPQCQEPWGMVPASV
FPNLWRIIYWSSQFLTWLIMPLMQSYLKAGDFTVKGKLKSALIENAIYYG
SYLFICGVLLIYIAVKGESLDWQKLKAIASSASNTWGLFLLILLLGYALV
EVPRSLWNNAKPGFALQYAYFKAAKLSTEKAEAEEHVDDILESLQGLSRV
IPNNHELRPCLETILRKVPIELQERASRNFARTGGSGMGATSSTILPSEK
ALVRIHKQVIKSLQTLQRTEALWSVQVQTVLHLEDVAKNIHSSDRRFKSE
FPRQRTQLERICYSASLQWYWECLLKAPFLKTMCVLTATMSAMVVWSELT
FFSRHPVLSIFANVIYVAKESYDFFTIEVFSMVVLCYFFYCTYSTILRIR
FLNLYYLAPHHQTNEHSLIFSGMLLCRLTPPMCLNFLGLIHMDTHIIPNR
IMETVYTQIMGHMDVIGIISNGFNIYFPMCMLAFCLATWFSLGSRALNAL
GFQQFLQNETIATELVQEGKDLIAREKRRRQRAEEAMARRRDFNRTDQVL
GSDYLSKYRSGGPGGLTSSRTPADGLLRDGDGSFDYAAVASSSALGVPRS
LSEEINDRFGVSTQVQVGFRDPDYEAETDGRIVGPPPRGLFDDV*

FI19409.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:54:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG8135-PA 694 CG8135-PA 1..694 1..694 3612 100 Plus