Clone FI19418 Report

Search the DGRC for FI19418

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:18
Vector:pOT2
Associated Gene/TranscriptCG18418-RA
Protein status:FI19418.pep: gold
Sequenced Size:1163

Clone Sequence Records

FI19418.complete Sequence

1163 bp assembled on 2012-01-13

GenBank Submission: BT133028.1

> FI19418.complete
CTCGTTTCCAACCATACACTCTCAATTCACATCTCTTTTTCCCAAACATA
CTTATTATATCTTCCAATTGTCCTGTTCCACATGGCGCTGGTTTACGGGG
TTGAAAAGAAGACGGTACCCACCCACATGAAATTCGTGATGGGCGGAACC
TCCGGAATGCTGGCCACATGCATTGTCCAGCCGTTGGACCTTCTCAAGAC
CCGAATGCAGATATCAGGAACTTTAGGCACACGCGAGTACAAGAACTCAT
TTGAGGTTCTATCGAAGGTTTTGAAGAACGAGGGGATATTATCCTTGTAC
AATGGATTGAGTGCCGGACTATTGAGACAGGCCACGTACACATCAGCCAA
GATGGGTGTTTACCAGATGGAGTTGGATTGGTATCGCAAGAACTTCGGAA
ATTATCCATCTATGGTGGCCAGTATGACGATGGGCATTGTGGCTGGCGCC
TTTGGAGCCATGTGTGGAAATCCAGCGGAGGTGGCCCTGATCCGGATGAT
GTCCGATAACCGCTTAATGCCGGAGGACAGGCGTAATTACAAGAATGTGG
GTGATGCCTTTGTAAGAATTGTGAAGGATGAGGGCGTGGTGGCGCTCTGG
AGAGGATGCTTGCCGACAGTGGGTCGTGCCATGGTCGTGAATATGGTGCA
GCTTGCCTCCTATTCACTGATGAAGAACCAATTGCATGGGTATCTCAGTG
AAGGAATACCTCTTCACCTGACCGCCGCCCTGGTGTCTGGTTTGCTGACC
TCCGTGACCTCAATGCCACTGGACATGGCCAAAACACGCATACAGCAGAT
GAAGGTGATCGATGGCAAGCCGGAATACAGTGGTACCATCGATGTACTGA
AAAAGGTGCTGAAAAATGAAGGCGCCTTTGCCGTGTGGAAGGGTTTCACT
CCGTATCTAATGCGTATGGGTCCACACACGATATTTTCATTTGTCTTCTT
GGAGCAAATGAATAAGGCCTACAGCAAGCATATGCTCAGTGATTCGCTAT
CCGATTCGGTACCTTAAAGGCATAGAAAATATGGCATTCCTCATCCCAAA
CAAATGGAAATTGATACGATGTCTGTGTAAAGCGCGCTTGTTCTGTAAAG
TAATTCATATCTTATATACAACAAAAAAATAGTTTATTATGCAAAAAAAA
AAAAAAAAAAAAA

FI19418.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:24:31
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4688279..4689420 1142..1 5680 99.8 Minus
chr3L 24539361 chr3L 4687486..4687987 659..152 570 74.6 Minus
chr3R 27901430 chr3R 25442862..25442945 745..828 195 82.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4688927..4690070 1144..1 5720 100 Minus
3L 28110227 3L 4688136..4688637 659..152 570 74.6 Minus
3L 28110227 3L 4688000..4688074 798..724 195 84 Minus
3R 32079331 3R 29620286..29620369 745..828 195 82.1 Plus
Blast to na_te.dros performed 2019-03-15 12:24:30
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 11920..11970 780..830 119 75 Plus
TART-A 13424 TART-A 13424bp 742..792 780..830 119 75 Plus

FI19418.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:25:29 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4688279..4689420 1..1142 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-13 11:38:46 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 1..936 82..1017 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:01 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 1..936 82..1017 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:58:18 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 1..936 82..1017 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-13 11:38:46 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 1..1142 1..1142 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:01 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 1..1142 1..1142 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:58:18 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
CG18418-RA 1..1142 1..1142 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:29 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4688929..4690070 1..1142 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:29 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4688929..4690070 1..1142 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:29 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4688929..4690070 1..1142 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:01 Download gff for FI19418.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4688929..4690070 1..1142 100   Minus

FI19418.hyp Sequence

Translation from 0 to 1016

> FI19418.hyp
LVSNHTLSIHISFSQTYLLYLPIVLFHMALVYGVEKKTVPTHMKFVMGGT
SGMLATCIVQPLDLLKTRMQISGTLGTREYKNSFEVLSKVLKNEGILSLY
NGLSAGLLRQATYTSAKMGVYQMELDWYRKNFGNYPSMVASMTMGIVAGA
FGAMCGNPAEVALIRMMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALW
RGCLPTVGRAMVVNMVQLASYSLMKNQLHGYLSEGIPLHLTAALVSGLLT
SVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKKVLKNEGAFAVWKGFT
PYLMRMGPHTIFSFVFLEQMNKAYSKHMLSDSLSDSVP*

FI19418.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG18418-PA 311 CG18418-PA 1..311 28..338 1594 100 Plus
CG7514-PA 301 CG7514-PA 1..301 30..337 1046 65.9 Plus
CG1907-PA 317 CG1907-PA 11..314 36..334 878 56.9 Plus
Dic1-PC 280 CG8790-PC 13..272 48..320 419 33.8 Plus
Dic1-PA 280 CG8790-PA 13..272 48..320 419 33.8 Plus

FI19418.pep Sequence

Translation from 0 to 1016

> FI19418.pep
LVSNHTLSIHISFSQTYLLYLPIVLFHMALVYGVEKKTVPTHMKFVMGGT
SGMLATCIVQPLDLLKTRMQISGTLGTREYKNSFEVLSKVLKNEGILSLY
NGLSAGLLRQATYTSAKMGVYQMELDWYRKNFGNYPSMVASMTMGIVAGA
FGAMCGNPAEVALIRMMSDNRLMPEDRRNYKNVGDAFVRIVKDEGVVALW
RGCLPTVGRAMVVNMVQLASYSLMKNQLHGYLSEGIPLHLTAALVSGLLT
SVTSMPLDMAKTRIQQMKVIDGKPEYSGTIDVLKKVLKNEGAFAVWKGFT
PYLMRMGPHTIFSFVFLEQMNKAYSKHMLSDSLSDSVP*

FI19418.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24717-PA 312 GF24717-PA 1..299 28..326 1124 69.2 Plus
Dana\GF24720-PA 300 GF24720-PA 6..300 36..337 1072 65.6 Plus
Dana\GF24719-PA 300 GF24719-PA 6..300 36..337 1062 65.2 Plus
Dana\GF23354-PA 309 GF23354-PA 6..304 36..330 905 56.9 Plus
Dana\GF11222-PA 288 GF11222-PA 13..284 44..326 436 33 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14165-PA 310 GG14165-PA 1..309 28..336 1559 92.9 Plus
Dere\GG14166-PA 301 GG14166-PA 1..301 30..337 1075 64.6 Plus
Dere\GG11672-PA 317 GG11672-PA 4..314 29..334 914 56.3 Plus
Dere\GG19610-PA 280 GG19610-PA 10..272 45..320 419 33 Plus
Dere\GG10687-PA 288 GG10687-PA 11..275 44..319 374 33.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:32:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15793-PA 310 GH15793-PA 5..308 33..336 1117 64.5 Plus
Dgri\GH18903-PA 316 GH18903-PA 9..307 35..329 938 58.2 Plus
Dgri\GH13941-PA 167 GH13941-PA 1..165 173..336 607 64.2 Plus
Dgri\GH15856-PA 287 GH15856-PA 15..273 48..319 436 35.1 Plus
Dgri\GH19040-PA 288 GH19040-PA 11..271 47..320 418 32.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG18418-PA 311 CG18418-PA 1..311 28..338 1594 100 Plus
CG7514-PA 301 CG7514-PA 1..301 30..337 1046 65.9 Plus
CG1907-PA 317 CG1907-PA 11..314 36..334 878 56.9 Plus
Dic1-PC 280 CG8790-PC 13..272 48..320 419 33.8 Plus
Dic1-PA 280 CG8790-PA 13..272 48..320 419 33.8 Plus
Dic1-PB 280 CG8790-PB 13..272 48..320 419 33.8 Plus
Dic3-PA 287 CG11196-PA 15..275 48..319 397 33.9 Plus
Dic2-PC 304 CG4323-PC 18..280 44..320 382 32.7 Plus
Dic2-PA 304 CG4323-PA 18..280 44..320 382 32.7 Plus
CG18324-PB 307 CG18324-PB 2..303 41..330 351 28.7 Plus
Bmcp-PB 303 CG7314-PB 10..302 45..322 350 29.6 Plus
Bmcp-PA 303 CG7314-PA 10..302 45..322 350 29.6 Plus
Ucp4B-PA 337 CG18340-PA 25..330 30..322 344 29.7 Plus
CG18327-PB 304 CG18327-PB 6..302 45..329 341 29.2 Plus
CG18327-PA 304 CG18327-PA 6..302 45..329 341 29.2 Plus
Dic4-PC 302 CG18363-PC 26..287 48..320 336 29.1 Plus
Dic4-PA 302 CG18363-PA 26..287 48..320 336 29.1 Plus
Ucp4A-PB 340 CG6492-PB 44..333 45..322 318 27.1 Plus
Ucp4A-PA 340 CG6492-PA 44..333 45..322 318 27.1 Plus
CG5254-PA 306 CG5254-PA 21..285 48..308 305 30.1 Plus
Ucp4C-PA 335 CG9064-PA 49..328 54..322 290 28.5 Plus
CG8323-PA 303 CG8323-PA 6..300 45..327 285 28 Plus
aralar1-PB 679 CG2139-PB 329..604 44..324 267 27.4 Plus
aralar1-PD 682 CG2139-PD 332..607 44..324 267 27.4 Plus
aralar1-PA 682 CG2139-PA 332..607 44..324 267 27.4 Plus
aralar1-PF 694 CG2139-PF 332..607 44..324 267 27.4 Plus
aralar1-PC 695 CG2139-PC 345..620 44..324 267 27.4 Plus
aralar1-PE 707 CG2139-PE 357..632 44..324 267 27.4 Plus
CG6893-PB 250 CG6893-PB 14..237 87..320 260 26.2 Plus
GC1-PB 321 CG18347-PB 24..288 44..298 250 28 Plus
GC1-PA 321 CG18347-PA 24..288 44..298 250 28 Plus
CG9582-PB 300 CG9582-PB 14..279 42..308 227 27.5 Plus
CG9582-PA 300 CG9582-PA 14..279 42..308 227 27.5 Plus
sea-PE 317 CG6782-PE 38..316 46..324 220 24.5 Plus
sea-PD 317 CG6782-PD 38..316 46..324 220 24.5 Plus
sea-PC 317 CG6782-PC 38..316 46..324 220 24.5 Plus
sea-PA 317 CG6782-PA 38..316 46..324 220 24.5 Plus
CG18324-PA 199 CG18324-PA 38..195 177..330 218 30.2 Plus
GC2-PB 319 CG12201-PB 23..293 44..308 218 25.4 Plus
Ucp4B-PC 228 CG18340-PC 25..222 30..218 208 29.7 Plus
CG5254-PB 237 CG5254-PB 3..216 92..308 208 27.6 Plus
Ucp4B-PB 222 CG18340-PB 25..219 30..215 207 30.2 Plus
colt-PD 306 CG3057-PD 10..300 35..325 203 23.6 Plus
colt-PA 306 CG3057-PA 10..300 35..325 203 23.6 Plus
Tpc2-PB 323 CG2857-PB 3..306 35..324 202 24.6 Plus
CG8026-PB 304 CG8026-PB 13..302 35..320 201 24.2 Plus
CG8026-PD 322 CG8026-PD 13..303 35..321 197 24.4 Plus
CG4995-PB 399 CG4995-PB 38..216 136..320 193 25.9 Plus
CG4995-PA 399 CG4995-PA 38..216 136..320 193 25.9 Plus
CG4995-PD 360 CG4995-PD 1..177 138..320 186 25.7 Plus
CG4995-PC 360 CG4995-PC 1..177 138..320 186 25.7 Plus
aralar1-PB 679 CG2139-PB 419..638 35..258 169 24.6 Plus
aralar1-PD 682 CG2139-PD 422..641 35..258 169 24.6 Plus
aralar1-PA 682 CG2139-PA 422..641 35..258 169 24.6 Plus
aralar1-PF 694 CG2139-PF 422..641 35..258 169 24.6 Plus
aralar1-PC 695 CG2139-PC 435..654 35..258 169 24.6 Plus
aralar1-PE 707 CG2139-PE 447..666 35..258 169 24.6 Plus
GC1-PB 321 CG18347-PB 117..290 39..204 166 26.1 Plus
GC1-PA 321 CG18347-PA 117..290 39..204 166 26.1 Plus
Ucp4C-PA 335 CG9064-PA 121..308 25..206 165 25.3 Plus
CG4995-PB 399 CG4995-PB 39..296 37..308 162 23.4 Plus
CG4995-PA 399 CG4995-PA 39..296 37..308 162 23.4 Plus
CG4995-PD 360 CG4995-PD 9..257 46..308 161 23.4 Plus
CG4995-PC 360 CG4995-PC 9..257 46..308 161 23.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:32:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12576-PA 310 GI12576-PA 3..301 31..329 1082 62.9 Plus
Dmoj\GI23120-PA 315 GI23120-PA 8..306 35..329 940 58.2 Plus
Dmoj\GI12639-PA 273 GI12639-PA 1..253 54..319 426 35.3 Plus
Dmoj\GI24334-PA 280 GI24334-PA 6..280 42..327 418 32 Plus
Dmoj\GI17535-PA 338 GI17535-PA 47..331 51..322 366 32.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17935-PA 312 GL17935-PA 1..306 28..332 1159 68.6 Plus
Dper\GL13895-PA 320 GL13895-PA 13..317 34..334 936 56.7 Plus
Dper\GL10604-PA 290 GL10604-PA 15..275 48..319 467 36.7 Plus
Dper\GL24469-PA 282 GL24469-PA 9..273 44..321 449 33.3 Plus
Dper\GL24092-PA 299 GL24092-PA 18..278 44..318 415 34.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20405-PA 312 GA20405-PA 1..306 28..332 1153 68.6 Plus
Dpse\GA15123-PA 320 GA15123-PA 13..317 34..334 939 57 Plus
Dpse\GA10831-PA 290 GA10831-PA 15..275 48..319 458 36 Plus
Dpse\GA21325-PA 282 GA21325-PA 9..273 44..321 449 33.3 Plus
Dpse\GA18108-PA 299 GA18108-PA 18..278 44..318 415 34.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:32:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13955-PA 311 GM13955-PA 1..311 28..338 1609 95.8 Plus
Dsec\GM13956-PA 301 GM13956-PA 1..301 30..337 1092 66.2 Plus
Dsec\GM12797-PA 317 GM12797-PA 11..314 36..334 916 57.2 Plus
Dsec\GM24103-PA 280 GM24103-PA 10..272 45..320 425 33.3 Plus
Dsec\GM20734-PA 287 GM20734-PA 11..275 44..319 423 34.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:32:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13238-PA 311 GD13238-PA 1..311 28..338 1602 95.5 Plus
Dsim\GD13239-PA 301 GD13239-PA 1..301 30..337 1092 66.2 Plus
Dsim\GD21444-PA 317 GD21444-PA 11..314 36..334 916 57.2 Plus
Dsim\GD10201-PA 287 GD10201-PA 11..275 44..319 426 34.4 Plus
Dsim\GD18902-PA 280 GD18902-PA 10..272 45..320 421 33 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:32:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15480-PA 311 GJ15480-PA 1..307 28..334 1174 67.8 Plus
Dvir\GJ10609-PA 315 GJ10609-PA 8..306 35..329 944 58.9 Plus
Dvir\GJ12758-PA 286 GJ12758-PA 15..273 48..319 432 35.3 Plus
Dvir\GJ10419-PA 288 GJ10419-PA 3..280 38..326 429 32.9 Plus
Dvir\GJ15429-PA 332 GJ15429-PA 32..324 45..321 355 33.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:32:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11904-PA 326 GK11904-PA 19..317 35..329 944 58.5 Plus
Dwil\GK13938-PA 282 GK13938-PA 9..272 44..320 438 33.8 Plus
Dwil\GK21563-PA 291 GK21563-PA 14..272 48..319 414 33.7 Plus
Dwil\GK11388-PA 303 GK11388-PA 6..294 45..320 384 31.6 Plus
Dwil\GK22729-PA 314 GK22729-PA 15..276 44..318 363 32.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:32:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20592-PA 313 GE20592-PA 1..309 28..336 1513 90 Plus
Dyak\GE20593-PA 301 GE20593-PA 1..301 30..337 1111 66.9 Plus
Dyak\GE23862-PA 317 GE23862-PA 11..314 36..334 906 55.9 Plus
Dyak\GE26266-PA 280 GE26266-PA 9..272 44..320 424 32.5 Plus
Dyak\GE23410-PA 287 GE23410-PA 11..275 44..319 414 33.3 Plus