BDGP Sequence Production Resources |
Search the DGRC for FI19422
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 194 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | betaTub56D-RA |
Protein status: | FI19422.pep: gold |
Sequenced Size: | 1693 |
1693 bp assembled on 2012-02-08
GenBank Submission: BT133200.1
> FI19422.complete CACGCCCGAAGATTCGAGTAAGATCGGTCGGCGGAACGCAATGACAGCTG CGCCTCGAGATCCGAAACGAAAACCCACGCCAGATGACGTTATCGTTGGT GTGGCGATGGTGCTGCTGGTCGTGGTGGTGGAAACGCACCAAAAATGGCA GCGAATAAGTTATGTTAATCGGAGCTCGGCCCATACACAGAGTTTATGAT GGCGTACATGGGTGGCCTAAACCACGTAGCCGAGCCCAGACATGTTTCTG GGAGATCATCTCCGATGAGCATGGCATCGATGCCACCGGCGCCTACCACG GTGACAGCGACCTGCAGCTGGAGCGCATCAATGTGTACTACAATGAGGCG TCCGGTGGCAAGTACGTGCCCCGCGCTGTCCTTGTCGATCTGGAGCCCGG CACCATGGACTCTGTGCGATCGGGACCTTTCGGCCAGATCTTCAGGCCCG ACAACTTTGTGTTCGGCCAGTCGGGTGCCGGCAACAACTGGGCCAAGGGT CATTACACAGAGGGTGCTGAGCTGGTGGACTCAGTGCTCGATGTTGTCCG CAAGGAGGCCGAATCCTGCGACTGCCTGCAAGGCTTCCAACTCACACACT CCCTTGGCGGCGGCACTGGCTCCGGTATGGGAACCCTGCTGATTTCCAAG ATCCGCGAGGAGTACCCCGACAGGATCATGAACACATACTCGGTTGTGCC GTCGCCCAAGGTGTCGGACACCGTTGTGGAGCCCTACAACGCCACCCTGT CGGTGCACCAGCTGGTCGAGAACACGGACGAGACCTACTGCATCGACAAC GAGGCTCTCTACGATATCTGCTTCCGCACCCTCAAGCTGACGACACCCAC ATACGGTGACCTGAACCATCTTGTCTCCCTGACCATGTCCGGCGTAACCA CCTGCCTCCGATTCCCCGGCCAACTGAACGCTGATCTCCGCAAGCTGGCC GTCAACATGGTGCCCTTCCCACGTCTTCACTTCTTCATGCCCGGCTTCGC TCCCCTGACCTCCCGAGGATCCCAGCAGTACCGCGCCCTCACCGTGCCCG AGCTGACCCAGCAGATGTTCGATGCCAAGAACATGATGGCCGCCTGCGAC CCACGCCACGGACGCTACCTTACCGTCGCCGCCATCTTCCGTGGACGCAT GTCCATGAAGGAGGTCGACGAGCAGATGCTGAACATCCAGAACAAGAACA GCTCCTACTTCGTCGAATGGATCCCCAACAACGTGAAGACCGCCGTGTGC GACATCCCGCCCCGTGGTCTGAAGATGTCCGCCACCTTCATCGGCAACTC CACTGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTCACCGCTA TGTTCAGGCGCAAGGCTTTCTTGCATTGGTACACCGGCGAGGGCATGGAC GAGATGGAGTTCACCGAGGCCGAGAGCAACATGAACGATCTGGTGTCCGA GTACCAGCAGTACCAGGAGGCCACCGCCGACGAGGACGCCGAGTTCGAGG AGGAGCAGGAGGCTGAGGTCGACGAGAACTAAATTCGAATCGGAAATCAA TCGAATTCTCGATCAATGTTTTGCGAAAAAAAATGAAACGAGAACAAATG AATTCAGTTGTAAAAGATTTGTTCTCTTAACAACGTAATCAATAAAGTCG GATCCAATTTTGTTCACAAGTCTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 15334484..15335911 | 1673..246 | 7140 | 100 | Minus |
chr2R | 21145070 | chr2R | 20197179..20198080 | 582..1483 | 3040 | 89.1 | Plus |
chr3R | 27901430 | chr3R | 5234517..5235433 | 1498..582 | 2605 | 85.6 | Minus |
chr2R | 21145070 | chr2R | 15336492..15336736 | 245..1 | 1225 | 100 | Minus |
chr3R | 27901430 | chr3R | 23790232..23790556 | 1467..1143 | 1100 | 89.2 | Minus |
chr3R | 27901430 | chr3R | 23791891..23792147 | 1141..885 | 805 | 87.5 | Minus |
chr3R | 27901430 | chr3R | 5235512..5235828 | 562..246 | 730 | 82 | Minus |
chr3R | 27901430 | chr3R | 23795878..23796110 | 712..480 | 550 | 82.4 | Minus |
chr2R | 21145070 | chr2R | 20196890..20197121 | 349..580 | 545 | 82.3 | Plus |
chr3R | 27901430 | chr3R | 23792618..23792791 | 882..709 | 465 | 84.5 | Minus |
chr3R | 27901430 | chr3R | 23797066..23797301 | 481..246 | 355 | 76.7 | Minus |
chr3R | 27901430 | chr3R | 23792401..23792497 | 822..726 | 215 | 81.4 | Minus |
chr2R | 21145070 | chr2R | 20196707..20196817 | 246..356 | 210 | 79.3 | Plus |
chr3L | 24539361 | chr3L | 6524088..6524209 | 879..1000 | 190 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 19447316..19448746 | 1676..246 | 7155 | 100 | Minus |
2R | 25286936 | 2R | 24311194..24312095 | 582..1483 | 3010 | 88.9 | Plus |
3R | 32079331 | 3R | 9408684..9409600 | 1498..582 | 2605 | 85.6 | Minus |
2R | 25286936 | 2R | 19449327..19449571 | 245..1 | 1225 | 100 | Minus |
3R | 32079331 | 3R | 27967268..27967592 | 1467..1143 | 1100 | 89.2 | Minus |
3R | 32079331 | 3R | 27968929..27969185 | 1141..885 | 805 | 87.5 | Minus |
3R | 32079331 | 3R | 9409679..9409995 | 562..246 | 730 | 82 | Minus |
3R | 32079331 | 3R | 27972919..27973151 | 712..480 | 565 | 82.8 | Minus |
2R | 25286936 | 2R | 24310905..24311136 | 349..580 | 545 | 82.3 | Plus |
3R | 32079331 | 3R | 27969656..27969829 | 882..709 | 465 | 84.5 | Minus |
3R | 32079331 | 3R | 27974107..27974342 | 481..246 | 355 | 76.7 | Minus |
3R | 32079331 | 3R | 27969439..27969535 | 822..726 | 215 | 81.4 | Minus |
2R | 25286936 | 2R | 24310722..24310832 | 246..356 | 210 | 79.3 | Plus |
3L | 28110227 | 3L | 6531600..6531723 | 877..1000 | 200 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 698..904 | 1052..1261 | 151 | 55.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 15334484..15335911 | 246..1673 | 100 | <- | Minus |
chr2R | 15336492..15336736 | 1..245 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaTub56D-RA | 1..1371 | 162..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaTub56D-RA | 1..1371 | 162..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaTub56D-RA | 1..1371 | 162..1532 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaTub56D-RA | 1..1673 | 1..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaTub56D-RA | 29..1701 | 1..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
betaTub56D-RA | 29..1701 | 1..1673 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19447319..19448746 | 246..1673 | 100 | <- | Minus |
2R | 19449327..19449571 | 1..245 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19447319..19448746 | 246..1673 | 100 | <- | Minus |
2R | 19449327..19449571 | 1..245 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 19447319..19448746 | 246..1673 | 100 | <- | Minus |
2R | 19449327..19449571 | 1..245 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 15334824..15336251 | 246..1673 | 100 | <- | Minus |
arm_2R | 15336832..15337076 | 1..245 | 100 | Minus |
Translation from 161 to 1531
> FI19422.pep MLIGARPIHRVYDGVHGWPKPRSRAQTCFWEIISDEHGIDATGAYHGDSD LQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFV FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG GTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQ LVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLR FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ QMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYF VEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQE AEVDEN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12605-PA | 447 | GF12605-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dana\GF17765-PA | 446 | GF17765-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dana\GF11391-PA | 474 | GF11391-PA | 40..467 | 29..450 | 2052 | 90.4 | Plus |
Dana\GF16133-PA | 513 | GF16133-PA | 20..509 | 29..456 | 1818 | 73.9 | Plus |
Dana\GF10957-PA | 457 | GF10957-PA | 20..422 | 29..432 | 1218 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20906-PA | 475 | GG20906-PA | 20..475 | 1..456 | 2470 | 99.6 | Plus |
Dere\betaTub85D-PA | 446 | GG17374-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dere\GG22960-PA | 454 | GG22960-PA | 20..447 | 29..450 | 2052 | 90.4 | Plus |
Dere\GG12076-PA | 513 | GG12076-PA | 20..509 | 29..456 | 1807 | 73.5 | Plus |
Dere\GG15348-PA | 462 | GG15348-PA | 20..422 | 29..432 | 1219 | 55.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20203-PA | 447 | GH20203-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dgri\GH19142-PA | 446 | GH19142-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dgri\GH20987-PA | 454 | GH20987-PA | 20..447 | 29..450 | 2050 | 90.4 | Plus |
Dgri\GH14021-PA | 512 | GH14021-PA | 20..496 | 29..449 | 1825 | 75.3 | Plus |
Dgri\GH12373-PA | 456 | GH12373-PA | 20..441 | 29..455 | 1194 | 52.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
betaTub56D-PA | 456 | CG9277-PA | 1..456 | 1..456 | 2417 | 100 | Plus |
betaTub56D-PB | 447 | CG9277-PB | 20..447 | 29..456 | 2257 | 100 | Plus |
betaTub85D-PA | 446 | CG9359-PA | 20..446 | 29..455 | 2152 | 94.6 | Plus |
betaTub60D-PB | 453 | CG3401-PB | 20..446 | 29..450 | 2073 | 90.6 | Plus |
betaTub60D-PA | 454 | CG3401-PA | 20..447 | 29..450 | 2072 | 90.4 | Plus |
betaTub97EF-PB | 457 | CG4869-PB | 20..453 | 29..456 | 2037 | 87.3 | Plus |
betaTub97EF-PC | 457 | CG4869-PC | 20..453 | 29..456 | 1987 | 84.8 | Plus |
CG32396-PA | 462 | CG32396-PA | 20..426 | 29..436 | 1230 | 55.3 | Plus |
alphaTub84B-PA | 450 | CG1913-PA | 21..449 | 30..448 | 905 | 39.6 | Plus |
alphaTub85E-PA | 449 | CG9476-PA | 21..448 | 30..450 | 900 | 40.4 | Plus |
alphaTub84D-PA | 450 | CG2512-PA | 21..449 | 30..448 | 896 | 39.6 | Plus |
alphaTub67C-PA | 462 | CG8308-PA | 21..461 | 30..447 | 838 | 37.6 | Plus |
CG7794-PA | 455 | CG7794-PA | 20..452 | 25..448 | 710 | 32.6 | Plus |
gammaTub23C-PA | 475 | CG3157-PA | 21..451 | 29..445 | 676 | 32.6 | Plus |
gammaTub37C-PB | 457 | CG17566-PB | 21..453 | 29..451 | 661 | 32.7 | Plus |
gammaTub37C-PA | 457 | CG17566-PA | 21..453 | 29..451 | 661 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20729-PA | 447 | GI20729-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dmoj\GI23599-PA | 446 | GI23599-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dmoj\GI21321-PA | 454 | GI21321-PA | 20..447 | 29..450 | 2049 | 90.4 | Plus |
Dmoj\GI24852-PA | 512 | GI24852-PA | 20..496 | 29..449 | 1813 | 74.8 | Plus |
Dmoj\GI14752-PA | 460 | GI14752-PA | 20..422 | 29..432 | 1232 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16725-PA | 447 | GL16725-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dper\GL13671-PA | 445 | GL13671-PA | 20..429 | 29..439 | 2015 | 93.9 | Plus |
Dper\GL23875-PA | 511 | GL23875-PA | 20..507 | 29..456 | 1803 | 73.4 | Plus |
Dper\GL19895-PA | 469 | GL19895-PA | 20..426 | 29..436 | 1211 | 54.5 | Plus |
Dper\GL12416-PA | 1216 | GL12416-PA | 787..1200 | 30..433 | 860 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27686-PA | 447 | GA27686-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dpse\GA21728-PA | 446 | GA21728-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dpse\GA17427-PA | 454 | GA17427-PA | 20..447 | 29..450 | 2050 | 90.4 | Plus |
Dpse\GA27086-PB | 455 | GA27086-PB | 20..451 | 29..456 | 1999 | 86.8 | Plus |
Dpse\GA27086-PA | 511 | GA27086-PA | 20..507 | 29..456 | 1803 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19828-PA | 447 | GM19828-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dsec\GM26260-PA | 446 | GM26260-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dsec\GM11852-PA | 454 | GM11852-PA | 20..447 | 29..450 | 2041 | 90.2 | Plus |
Dsec\GM16302-PA | 513 | GM16302-PA | 20..509 | 29..456 | 1806 | 73.3 | Plus |
Dsec\GM14788-PA | 462 | GM14788-PA | 20..422 | 29..432 | 1219 | 55.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25319-PA | 447 | GD25319-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dsim\GD20798-PA | 446 | GD20798-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dsim\GD13960-PA | 462 | GD13960-PA | 20..422 | 29..432 | 1193 | 54.8 | Plus |
Dsim\GD20767-PA | 449 | GD20767-PA | 21..448 | 30..450 | 866 | 40.4 | Plus |
Dsim\GD19909-PA | 450 | GD19909-PA | 21..434 | 30..433 | 862 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20466-PA | 447 | GJ20466-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dvir\GJ23573-PA | 446 | GJ23573-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dvir\GJ21592-PA | 454 | GJ21592-PA | 20..447 | 29..450 | 2051 | 90.4 | Plus |
Dvir\GJ24495-PA | 523 | GJ24495-PA | 20..507 | 29..449 | 1780 | 72.7 | Plus |
Dvir\GJ19155-PA | 461 | GJ19155-PA | 20..422 | 29..432 | 1228 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15706-PA | 447 | GK15706-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dwil\GK12133-PA | 446 | GK12133-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dwil\GK22203-PA | 454 | GK22203-PA | 20..447 | 29..450 | 2056 | 90.7 | Plus |
Dwil\GK22527-PA | 513 | GK22527-PA | 20..496 | 29..449 | 1818 | 75.1 | Plus |
Dwil\GK10221-PA | 456 | GK10221-PA | 20..422 | 29..432 | 1229 | 55.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\betaTub56D-PA | 447 | GE13844-PA | 20..447 | 29..456 | 2324 | 100 | Plus |
Dyak\GE24779-PA | 446 | GE24779-PA | 20..430 | 29..439 | 2090 | 96.4 | Plus |
Dyak\GE14397-PA | 454 | GE14397-PA | 20..447 | 29..450 | 2050 | 90.4 | Plus |
Dyak\GE10520-PA | 513 | GE10520-PA | 20..509 | 29..456 | 1811 | 73.7 | Plus |
Dyak\GE21566-PA | 462 | GE21566-PA | 20..422 | 29..432 | 1221 | 55.6 | Plus |
Translation from 161 to 1531
> FI19422.hyp MLIGARPIHRVYDGVHGWPKPRSRAQTCFWEIISDEHGIDATGAYHGDSD LQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFV FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG GTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQ LVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLR FPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ QMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYF VEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRR KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQE AEVDEN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
betaTub56D-PA | 456 | CG9277-PA | 1..456 | 1..456 | 2417 | 100 | Plus |
betaTub56D-PB | 447 | CG9277-PB | 20..447 | 29..456 | 2257 | 100 | Plus |
betaTub85D-PA | 446 | CG9359-PA | 20..446 | 29..455 | 2152 | 94.6 | Plus |
betaTub60D-PB | 453 | CG3401-PB | 20..446 | 29..450 | 2073 | 90.6 | Plus |
betaTub60D-PA | 454 | CG3401-PA | 20..447 | 29..450 | 2072 | 90.4 | Plus |