Clone FI19426 Report

Search the DGRC for FI19426

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:26
Vector:pOT2
Associated Gene/TranscriptSP1173-RA
Protein status:FI19426.pep: gold
Sequenced Size:2826

Clone Sequence Records

FI19426.complete Sequence

2826 bp assembled on 2012-02-08

GenBank Submission: BT133221.1

> FI19426.complete
GCGTTTGGACGCGCACGCGGATTACCAGTTGGGAAAATATATCGAAACCG
TGCCTCGAAACTCACCCACGCCGGGAGCTTCTTTGACTTCTGGCAGCTGC
CGCCAAAATAAAAAAAATACATATCGAATAAAAACAAAGTAGTTTTTATT
CGAGGCATCCGCGCGACGCGCACTTTTCGAACCCATAGAGCCTAACATGA
GCAACTGAGTACCAACGAAACTAAGAGAAAATCGACGAGGAAGAACGAAA
TCCCCGAAAGGTGGCTTTATTACTGAGATTTTATATAGATAGTTTGTAGT
AACCGAAATCGAGAAAATGGGTTTCATTGCGGAGCGAAAGCCGCGTGTCA
ACAAGACGTTGATCTCGCTCAAGTTTGTTGTGTTCTTCGTAATAACCGGT
CTTACAGCTTTGCATGTTTTGCATGCCACCAAGCCACTGTTGCTGGGTCT
AAACTTCTCGGAATACCGGACCATTACTATTTTGGCGCCATTCGTCTCCA
TTTTGGGTCCTTTGATCGCTGGTCCCTGGGCAGATCGATTGGCAGCCAAG
AACCCCAATACTTTTGGAAAGACTCTGCGAGTGCTAACTGCCGTCTTCTT
GCTGATCTCGGCCTTCATATATGCCTTTCTGTTTGCCGTGCCGGAAGTTA
CCCGAAGGGGAGAGATACGTGAGCCGTTGGTCAGCTTTGGCTGCGATGAA
ACTGGAGGATTCTTGTTCCAGGAGCGCTGTGGCTCGAACGCCACTTGCAG
TCGGTGGGATCAGAAGGAGGGCAAAATCAACCTGACGCGTTGCACCTACA
GTTGCCAGAATCCCAAGCTCTATGAGCCCCTCTATGTGGCTTGGTTGGCT
GAGGTACCCACGGTGGCTCCTTCAACCGAGCAGAGTTCGGAGTTTGATTA
CGAAGATGAGGGCAGTACTGCGGTAACCGAAAGTTTGCGCACCAGGAGGG
ACGTGGAGAGCTCGGATCCGGCAGATAGTGCTGGTGTGGAGGCCATTAGT
GGTGAGGTTCCTCTTCACCGGTCCATCAGGCAGGTCAAAAAACCCCCCAC
CAAGGTGTACGTCCAGCCTCCTCATGTCTGTCTAACCGAAAGAAACCAGA
ACGGCGAGGATGTGGTGAAGCACTGCCACGCCTACACTGAGGACACCACT
AGTGTGGTGATGGATGCCCTCATGGGCTCAGCGATCAGTCAGGAGGAGCA
CTACGATGACTACGAAGGATGGTGCCAGTACCCACTTGAGGGTTTCCAGT
GCCACATTCCCGAGGAGCAGGTGAATTACATGAAGGACTTCAAGCACTAC
ATGCAGAATGACAGCAACTGCAAGCCCATGATCGAATGCCAAGTGGTGAA
TCCCTACCATGAACAGAGTGTGCTTTCGGACAGCGAGTGTACCAATACCA
CCGGTAGTGTCCAAGATACCCTCGTGGGCTATACGACTATTCGCCTGATT
GGAGACATTTTCCCCATGGCTGCACTGACTCTTTTGAACACGGCAATCGT
GATCGCAGTTCGTGAGACCTCCGAGGGAAGAGGAGAGGTGTGCCGCCAGT
ATGTTTGGGGCGCCATTGGCTATGTAGTGCTCTTCTCGCCGCTGGATCTG
TTCTTCTTCCAGAACGAACCCAACCATGATGCTGCCCTTGTTGCTCTTAT
TATATTTATCGTAAGCTTTGTTTTGGGTGCTGTGGTGCTGCTGTGTGCCA
CACAAATGCCACTGAGCCCGCCGGAGTGGTGGTGGCACACAAAGACCGGA
ATGCTGGTGGTTCCTATGTCTGCCATCCGTCGCTATACTCCTGAGATTTT
GGTGCTCACACTGGTGTCCATTCTTTTTGGCACCTTCTGGAGCAGCATTC
ATAGCTACCTTTGGTGGACTTTCACTGATGTCGATGCCGTCTGCTATTCT
GGCTTGATCCTCATCCTGGTCCTTTTCTTCAATGTGGACAAGTTTATTGA
GTACTGTGGGCACTCGAATATCTTCATCGGTGGCTTGGCCATCTTTGTCA
TTAGGTTTACGGCTTTGAGTGATGCCCAAACAAAGTGGTTAACTGTCATC
ATGGAGACCATCGAGCCGGCTGTAATTGGTCTGATTTGGATTACTATTAT
CCTATATATGCGTCATGCCATGCCAAGGAAATTGACTGCAACTGGACAGG
CCATTGCTGTTTTGGCCTTCTTTGGATTAGGCAAAGGCTTTGGTGCTCTG
ATTGGATTGGCTCGCGATGAGAGGGATCCGAAACTGGAGTTCTGGTCCTG
CACCTACCAATGGCTGGCCATTGTGGCCTGCGTTGTGGCTTTGATCTATT
TTGGAATCTATAATCTGATCCTGGCTCCACGGTGCACCGCCAAGCCACAG
CACTCTGAGGAGTTGATTTCTGGATCCGCATCACAGAACTTTGGTAATAC
CGGAAACGGAAACGGTGCTGGCAACGGAACCGGAAACGGAAATGGCGCTG
GAGCGTCACTAAATGGAAACGGAAACGGGAGCTACTCGCCTTTAAGGGTT
TACCACAACGAGAGGGGGAAGAAGGGACAGTTTAGATACTAAGATAATGT
GGGAAGTCCAGAGATTAATGGATGTTTTACTCTTTGCATGGATCACTAAT
GCTCCGCCTCTCTCAAATCGAGTGCGAATGATATTCTTAGTTTTTAAATG
TGTACACCACGCCTCGTCCTCCTCCACCTACCGCCCCCCGCCCGCTTGAG
GGCAACACTGCTAATAGTTTGTAATGCGTATTTTTGCTAAGTGTATACAC
CAGGAGGATGAAAAGCAAAGGAGTGGAGACGATTAAAACAAAAAAATGAA
CTTTTTTATAAAAAAAAAAAAAAAAA

FI19426.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:05:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 6683810..6684650 1238..398 4100 99.2 Minus
chr3L 24539361 chr3L 6682732..6683516 2181..1397 3850 99.4 Minus
chr3L 24539361 chr3L 6682041..6682674 2809..2177 3090 99.5 Minus
chr3L 24539361 chr3L 6684715..6684936 400..179 1080 99.1 Minus
chr3L 24539361 chr3L 6695675..6695853 179..1 895 100 Minus
chr3L 24539361 chr3L 6683577..6683735 1396..1238 735 97.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6691465..6692305 1238..398 4205 100 Minus
3L 28110227 3L 6690387..6691171 2181..1397 3925 100 Minus
3L 28110227 3L 6689696..6690329 2812..2179 3170 100 Minus
3L 28110227 3L 6692370..6692591 400..179 1110 100 Minus
3L 28110227 3L 6703320..6703498 179..1 895 100 Minus
3L 28110227 3L 6691232..6691390 1396..1238 795 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:05:07 has no hits.

FI19426.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:05:55 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 6682041..6682670 2181..2809 99 <- Minus
chr3L 6682733..6683516 1397..2180 99 <- Minus
chr3L 6683577..6683734 1239..1396 97 <- Minus
chr3L 6683810..6684649 399..1238 99 <- Minus
chr3L 6684717..6684935 180..398 99 <- Minus
chr3L 6695675..6695853 1..179 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 10:09:11 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
SP1173-RA 1..2226 317..2542 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:07:38 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
SP1173-RD 1..2226 317..2542 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:21:28 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
SP1173-RD 1..2226 317..2542 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 10:09:10 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
SP1173-RA 1..2809 1..2809 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:07:38 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
SP1173-RA 24..2832 1..2809 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:21:28 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
SP1173-RA 24..2832 1..2809 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:55 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6689699..6690327 2181..2809 100 <- Minus
3L 6690388..6691171 1397..2180 100 <- Minus
3L 6691232..6691389 1239..1396 100 <- Minus
3L 6691465..6692304 399..1238 100 <- Minus
3L 6692372..6692590 180..398 100 <- Minus
3L 6703320..6703498 1..179 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:55 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6689699..6690327 2181..2809 100 <- Minus
3L 6690388..6691171 1397..2180 100 <- Minus
3L 6691232..6691389 1239..1396 100 <- Minus
3L 6691465..6692304 399..1238 100 <- Minus
3L 6692372..6692590 180..398 100 <- Minus
3L 6703320..6703498 1..179 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:55 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6689699..6690327 2181..2809 100 <- Minus
3L 6690388..6691171 1397..2180 100 <- Minus
3L 6691232..6691389 1239..1396 100 <- Minus
3L 6691465..6692304 399..1238 100 <- Minus
3L 6692372..6692590 180..398 100 <- Minus
3L 6703320..6703498 1..179 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:07:38 Download gff for FI19426.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6682799..6683427 2181..2809 100 <- Minus
arm_3L 6683488..6684271 1397..2180 100 <- Minus
arm_3L 6684332..6684489 1239..1396 100 <- Minus
arm_3L 6684565..6685404 399..1238 100 <- Minus
arm_3L 6685472..6685690 180..398 100 <- Minus
arm_3L 6696420..6696598 1..179 100   Minus

FI19426.pep Sequence

Translation from 316 to 2541

> FI19426.pep
MGFIAERKPRVNKTLISLKFVVFFVITGLTALHVLHATKPLLLGLNFSEY
RTITILAPFVSILGPLIAGPWADRLAAKNPNTFGKTLRVLTAVFLLISAF
IYAFLFAVPEVTRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQK
EGKINLTRCTYSCQNPKLYEPLYVAWLAEVPTVAPSTEQSSEFDYEDEGS
TAVTESLRTRRDVESSDPADSAGVEAISGEVPLHRSIRQVKKPPTKVYVQ
PPHVCLTERNQNGEDVVKHCHAYTEDTTSVVMDALMGSAISQEEHYDDYE
GWCQYPLEGFQCHIPEEQVNYMKDFKHYMQNDSNCKPMIECQVVNPYHEQ
SVLSDSECTNTTGSVQDTLVGYTTIRLIGDIFPMAALTLLNTAIVIAVRE
TSEGRGEVCRQYVWGAIGYVVLFSPLDLFFFQNEPNHDAALVALIIFIVS
FVLGAVVLLCATQMPLSPPEWWWHTKTGMLVVPMSAIRRYTPEILVLTLV
SILFGTFWSSIHSYLWWTFTDVDAVCYSGLILILVLFFNVDKFIEYCGHS
NIFIGGLAIFVIRFTALSDAQTKWLTVIMETIEPAVIGLIWITIILYMRH
AMPRKLTATGQAIAVLAFFGLGKGFGALIGLARDERDPKLEFWSCTYQWL
AIVACVVALIYFGIYNLILAPRCTAKPQHSEELISGSASQNFGNTGNGNG
AGNGTGNGNGAGASLNGNGNGSYSPLRVYHNERGKKGQFRY*

FI19426.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10893-PA 736 GF10893-PA 1..736 1..741 3391 86.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15030-PA 741 GG15030-PA 1..741 1..741 3700 95.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:26:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15636-PA 741 GH15636-PA 1..741 1..741 2804 72.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:40
Subject Length Description Subject Range Query Range Score Percent Strand
SP1173-PB 741 CG10121-PB 1..741 1..741 3922 100 Plus
SP1173-PA 741 CG10121-PA 1..741 1..741 3922 100 Plus
SP1173-PD 741 CG10121-PD 1..741 1..741 3922 100 Plus
SP1173-PC 741 CG10121-PC 1..741 1..741 3922 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:26:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12683-PA 740 GI12683-PA 1..740 1..741 2811 72.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:26:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13239-PA 753 GL13239-PA 1..753 1..741 3009 76.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:26:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10088-PA 740 GA10088-PA 1..740 1..741 3307 84.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13829-PA 741 GM13829-PA 1..741 1..741 3908 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:26:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13116-PA 743 GD13116-PA 1..743 1..741 3906 98.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:26:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12667-PA 737 GJ12667-PA 1..737 1..741 2884 74.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:26:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12581-PA 750 GK12581-PA 1..750 1..741 2854 75.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:26:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20473-PA 741 GE20473-PA 1..741 1..741 3499 90.6 Plus

FI19426.hyp Sequence

Translation from 316 to 2541

> FI19426.hyp
MGFIAERKPRVNKTLISLKFVVFFVITGLTALHVLHATKPLLLGLNFSEY
RTITILAPFVSILGPLIAGPWADRLAAKNPNTFGKTLRVLTAVFLLISAF
IYAFLFAVPEVTRRGEIREPLVSFGCDETGGFLFQERCGSNATCSRWDQK
EGKINLTRCTYSCQNPKLYEPLYVAWLAEVPTVAPSTEQSSEFDYEDEGS
TAVTESLRTRRDVESSDPADSAGVEAISGEVPLHRSIRQVKKPPTKVYVQ
PPHVCLTERNQNGEDVVKHCHAYTEDTTSVVMDALMGSAISQEEHYDDYE
GWCQYPLEGFQCHIPEEQVNYMKDFKHYMQNDSNCKPMIECQVVNPYHEQ
SVLSDSECTNTTGSVQDTLVGYTTIRLIGDIFPMAALTLLNTAIVIAVRE
TSEGRGEVCRQYVWGAIGYVVLFSPLDLFFFQNEPNHDAALVALIIFIVS
FVLGAVVLLCATQMPLSPPEWWWHTKTGMLVVPMSAIRRYTPEILVLTLV
SILFGTFWSSIHSYLWWTFTDVDAVCYSGLILILVLFFNVDKFIEYCGHS
NIFIGGLAIFVIRFTALSDAQTKWLTVIMETIEPAVIGLIWITIILYMRH
AMPRKLTATGQAIAVLAFFGLGKGFGALIGLARDERDPKLEFWSCTYQWL
AIVACVVALIYFGIYNLILAPRCTAKPQHSEELISGSASQNFGNTGNGNG
AGNGTGNGNGAGASLNGNGNGSYSPLRVYHNERGKKGQFRY*

FI19426.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:52:08
Subject Length Description Subject Range Query Range Score Percent Strand
SP1173-PB 741 CG10121-PB 1..741 1..741 3922 100 Plus
SP1173-PA 741 CG10121-PA 1..741 1..741 3922 100 Plus
SP1173-PD 741 CG10121-PD 1..741 1..741 3922 100 Plus
SP1173-PC 741 CG10121-PC 1..741 1..741 3922 100 Plus