Clone FI19438 Report

Search the DGRC for FI19438

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:38
Vector:pOT2
Associated Gene/TranscriptSir2-RA
Protein status:FI19438.pep: gold
Sequenced Size:3800

Clone Sequence Records

FI19438.complete Sequence

3800 bp assembled on 2012-02-08

GenBank Submission: BT133215.1

> FI19438.complete
CTACGTGTGCCATCTTGCTTTTTTCATCGGAAAATTTTCCAGAAACTACG
CTCGAAAATTACGAAAAAATCGCAACCAAATGGTGTCGAAATTTTTTTAA
AATTTAAGTTTCGTGCATATACGTGAAATAAAGTCGGGTTGGTTGAAAAA
ATCGCGGCCAAACGATCGCTGGAGAATTTTTTCAATCAAGCCAAATGGGT
GCGAAGCTGACGACGTAAAAATTTTTGTGTGTACCAACGAAAGAGCGGAG
AAAACGGACGAGGCGAGAGCGCAAAGCGGAGAGACCGAGGAAACACTCGC
GCAAGAAGAAGAAGAGCCAGCAACAGCACCAACTACGAGAGTTTTCTCTC
CGTGAGTCTGTGTGTGTGCGCGTGTGCGCGCGCTTGGGTTCGGAAAAAAT
GATGGAAAATTACGAGGAAATTCGCCTGGGCCACATTAGGTCTAAAGATC
TGGGCAACCAGGTGCCAGACACTACGCAATTCTATCCGCCAACTAAGTTT
GATTTTGGCGCGGAAATTCTGGCCTCAACGTCAACAGAGGCAGAGGCAGA
GGCAGAAGCAACAGCAACAACCACAGAACCAGCAACAAGCGAACTTGCTG
GCAAAGCAAATGGTGAAATCAAAACAAAAACATTGGCTGCCAGGGAAGAA
CAAGAGATTGGCGCCAATTTGGAGCATAAAACCAAAAATCCCACAAAGTC
AATGGGCGAGGATGAAGATGACGAGGAGGAGGAGGAAGAGGACGATGAGG
AGGAGGAGGAGGACGACGAGGAGGGAATCACCGGAACGAGCAACGAGGAT
GAGGACTCCAGCTCAAATTGCTCCTCATCCGTGGAACCCGACTGGAAGCT
GCGCTGGTTGCAACGAGAATTTTACACAGGTCGTGTGCCGCGCCAGGTTA
TTGCCAGCATTATGCCGCATTTCGCCACCGGCCTGGCGGGCGACACCGAC
GACTCCGTGCTGTGGGACTATTTGGCCCACCTGTTGAACGAGCCGAAGCG
GCGCAACAAGCTGGCCTCAGTGAACACCTTCGACGATGTCATCAGTTTGG
TCAAGAAATCACAGAAGATCATTGTGCTAACGGGAGCCGGAGTATCCGTC
TCCTGCGGCATTCCGGACTTCCGGTCCACCAATGGCATATATGCGCGATT
GGCCCATGATTTTCCCGATCTGCCCGATCCGCAGGCCATGTTTGATATCA
ACTACTTCAAGAGGGATCCACGACCGTTCTACAAGTTTGCCCGCGAGATA
TATCCCGGCGAGTTTCAGCCCTCACCCTGCCATCGTTTCATCAAAATGCT
GGAGACCAAGGGCAAACTGTTGCGCAACTACACACAGAACATCGACACCC
TCGAGCGGGTGGCAGGCATTCAGCGAGTAATCGAGTGTCACGGCTCCTTT
TCAACGGCCTCGTGCACCAAGTGTCGTTTCAAGTGCAACGCTGACGCCCT
GCGGGCGGACATATTTGCCCAGCGAATTCCGGTGTGCCCGCAGTGCCAGC
CCAATAAGGAGCAGAGCGTGGATGCCTCGGTGGCCGTTACTGAGGAGGAG
CTGCGCCAACTGGTCGAGAACGGCATCATGAAGCCGGATATCGTCTTTTT
CGGCGAGGGACTGCCGGATGAGTACCACACGGTCATGGCCACCGACAAGG
ACGTGTGCGATCTACTGATCGTGATCGGCTCCTCGCTGAAGGTCCGACCT
GTGGCCCACATTCCCAGCAGCATACCGGCCACGGTGCCGCAGATTCTTAT
CAATCGCGAGCAGCTGCATCACCTTAAGTTCGATGTGGAGCTGCTGGGCG
ACTCCGATGTGATCATCAACCAGATTTGCCACCGGTTGTCGGACAACGAT
GATTGCTGGCGGCAGCTGTGCTGCGATGAGTCAGTGCTTACCGAAAGCAA
GGAGCTAATGCCTCCGGAGCACTCTAATCACCACCTCCATCATCATCTAC
TTCACCACCGCCACTGCAGTTCAGAGAGCGAGCGACAGTCGCAACTGGAC
ACGGATACGCAGTCTATTAAATCAAATAGTTCGGCGGACTACATACTAGG
ATCAGCTGGCACCTGCTCGGATAGTGGATTTGAGTCATCTACTTTTAGCT
GTGGAAAGCGTTCCACTGCCGCCGAAGCGGCAGCCATCGAACGTATTAAA
ACAGACATACTGGTTGAGCTGAACGAGACCACAGCCCTAAGTTGCGATCG
TCTGGGCCTGGAAGGCCCTCAGACAACGGTGGAGAGCTATCGCCATCTTT
CCATTGATTCCTCCAAGGATAGCGGCATCGAGCAGTGCGACAACGAAGCC
ACGCCTAGCTACGTGCGACCCAGCAATCTTGTTCAGGAGACCAAGACAGT
GGCGCCCAGCCTGACGCCCATTCCACAACAGAGGGGAAAGCGACAGACAG
CAGCCGAGCGTCTGCAGCCTGGAACATTCTATTCGCACACCAACAACTAT
TCGTATGTGTTTCCAGGAGCCCAGGTATTCTGGGACAACGATTACAGCGA
TGATGATGACGAAGAAGAGGAAAGATCACACAATAGACACAGTGATCTCT
TTGGCAATGTGGGGCACAATTATAAGGATGATGATGAGGATGCATGTGAT
CTGAACGCCGTTCCATTGTCACCATTGCTACCGCCTTCACTGGAGGCTCA
CATAGTCACCGATATAGTGAATGGATCCAACGAACCGCTGCCCAACAGCA
GTCCCGGCCAGAAAAGAACCGCCTGCATTATAGAACAGCAGCCAACGCCC
GCTATTGAAACGGAAATTCCCCCACTAAAGAAGCGGCGACCAAGTGAGGA
AAATAAGCAGCAGACCCAAATAGAAAGATCTGAGGAGAGTCCGCCTCCAG
GACAGTTAGCAGCAGTGTAAACGTAATCTTAGCCCCTGCTAGTAGTGTAG
TATTTATTTTAAATGCAATTCAAGCCAACTTGTAAACAGAGAAGCTGCGA
AATCGTAGCCGAGGGCCATGTTACCAATTTCATTCCCCGGAAAGGTACTG
GAATCGGAAACGGTAAACCGTTTACTTGTTATTTATTTAGAATATGAGAA
CACTTCAATTCCCGGTATCACGAAGTTTTCAAGAAATGAAACCGGATCCA
CTAGTTTACTCAATTCGAGGCTTTAGAGATCTGACCCTCGTTGCTTTACC
ACCAACCCCTTATGCCCAATCCCGTTTTGATATTTTTGAAAAACTCTTAG
TTTATTTATTATCTCTCTTTTTCAAAACGAAACGCTGTAAATGTTAGTAT
TTTATTATATTAAGTTGTTATTGAGGCCTTTTTAGACAAACTAAAGAGAT
AAGCGGAAAGTTGAAAATCCTTTAGAAAGCAGGATTTCTTTGTATTCAAA
GAGAAGCAGCGCCTCAACTTTAAATCTAGTTCTAAGCGTAACATATTCAA
AACTATGCAAATGCAAACGGAAAAATACGTTAGTTTTAGTTAAAAACTAG
ACACAAACACTCTGTATATAAGCACTCGCCCCTAATTTGTATTGTACATG
ATTCTTTTTCTACTTTTTTGTGTTATCTCCTTACCATTTTATATTTCTAT
CGGTTATGGCAACTATTTTTTAACATTTATACACTCGCACCCACATCAAA
ATGTAACAGCGCATGGATTTCAAAATATTCATAAGAGTTGGAAATTTGGT
GTGCGTGTTTGAAATGTTTATTCGAAACCTAGCATAAATATATAGCCACC
AAACGCAGTGTAAACATAGCAGTAAGAATTTAGTCTATATGTCTTAAAAG
TGTATTAATATCCAGAATATAAACCAATCTAAAAAAAAAAAAAAAAAAAA

FI19438.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:15:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13166069..13168241 1608..3780 10850 100 Plus
chr2L 23010047 chr2L 13164289..13165891 1..1609 7905 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13167379..13169565 1608..3794 10935 100 Plus
2L 23513712 2L 13165593..13167201 1..1609 8045 100 Plus
Blast to na_te.dros performed 2019-03-15 13:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6781..6846 522..587 159 71.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2476 526..655 157 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6727..6813 522..608 147 63.2 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3284..3375 540..632 147 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2437 540..661 144 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2360..2486 522..642 142 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2348..2413 522..587 141 68.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6748..6813 522..587 141 68.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6793 540..609 134 65.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6847..6912 522..587 123 65.2 Plus

FI19438.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:16:16 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13164289..13164989 1..707 99 == Plus
chr2L 13165057..13165890 775..1608 100 -> Plus
chr2L 13166070..13168241 1609..3780 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 19:32:43 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
Sir2-RA 1..2472 399..2870 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:09:40 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
Sir2-RA 1..2472 399..2870 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:25:56 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
Sir2-RA 1..2472 399..2870 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 19:32:43 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
Sir2-RA 43..3822 1..3780 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:09:40 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
Sir2-RA 30..3809 1..3780 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:25:56 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
Sir2-RA 30..3809 1..3780 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:16 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13165593..13167200 1..1608 100 -> Plus
2L 13167380..13169551 1609..3780 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:16 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13165593..13167200 1..1608 100 -> Plus
2L 13167380..13169551 1609..3780 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:16 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13165593..13167200 1..1608 100 -> Plus
2L 13167380..13169551 1609..3780 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:09:40 Download gff for FI19438.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13165593..13167200 1..1608 100 -> Plus
arm_2L 13167380..13169551 1609..3780 100   Plus

FI19438.hyp Sequence

Translation from 398 to 2869

> FI19438.hyp
MMENYEEIRLGHIRSKDLGNQVPDTTQFYPPTKFDFGAEILASTSTEAEA
EAEATATTTEPATSELAGKANGEIKTKTLAAREEQEIGANLEHKTKNPTK
SMGEDEDDEEEEEEDDEEEEEDDEEGITGTSNEDEDSSSNCSSSVEPDWK
LRWLQREFYTGRVPRQVIASIMPHFATGLAGDTDDSVLWDYLAHLLNEPK
RRNKLASVNTFDDVISLVKKSQKIIVLTGAGVSVSCGIPDFRSTNGIYAR
LAHDFPDLPDPQAMFDINYFKRDPRPFYKFAREIYPGEFQPSPCHRFIKM
LETKGKLLRNYTQNIDTLERVAGIQRVIECHGSFSTASCTKCRFKCNADA
LRADIFAQRIPVCPQCQPNKEQSVDASVAVTEEELRQLVENGIMKPDIVF
FGEGLPDEYHTVMATDKDVCDLLIVIGSSLKVRPVAHIPSSIPATVPQIL
INREQLHHLKFDVELLGDSDVIINQICHRLSDNDDCWRQLCCDESVLTES
KELMPPEHSNHHLHHHLLHHRHCSSESERQSQLDTDTQSIKSNSSADYIL
GSAGTCSDSGFESSTFSCGKRSTAAEAAAIERIKTDILVELNETTALSCD
RLGLEGPQTTVESYRHLSIDSSKDSGIEQCDNEATPSYVRPSNLVQETKT
VAPSLTPIPQQRGKRQTAAERLQPGTFYSHTNNYSYVFPGAQVFWDNDYS
DDDDEEEERSHNRHSDLFGNVGHNYKDDDEDACDLNAVPLSPLLPPSLEA
HIVTDIVNGSNEPLPNSSPGQKRTACIIEQQPTPAIETEIPPLKKRRPSE
ENKQQTQIERSEESPPPGQLAAV*

FI19438.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
Sir2-PA 823 CG5216-PA 1..823 1..823 4341 100 Plus
Sirt2-PB 355 CG5085-PB 48..257 222..454 510 43.6 Plus
Sirt2-PA 355 CG5085-PA 48..257 222..454 510 43.6 Plus
Sirt4-PC 312 CG3187-PC 48..256 224..432 196 29.6 Plus
Sirt6-PB 325 CG6284-PB 36..270 213..480 173 23.4 Plus

FI19438.pep Sequence

Translation from 398 to 2869

> FI19438.pep
MMENYEEIRLGHIRSKDLGNQVPDTTQFYPPTKFDFGAEILASTSTEAEA
EAEATATTTEPATSELAGKANGEIKTKTLAAREEQEIGANLEHKTKNPTK
SMGEDEDDEEEEEEDDEEEEEDDEEGITGTSNEDEDSSSNCSSSVEPDWK
LRWLQREFYTGRVPRQVIASIMPHFATGLAGDTDDSVLWDYLAHLLNEPK
RRNKLASVNTFDDVISLVKKSQKIIVLTGAGVSVSCGIPDFRSTNGIYAR
LAHDFPDLPDPQAMFDINYFKRDPRPFYKFAREIYPGEFQPSPCHRFIKM
LETKGKLLRNYTQNIDTLERVAGIQRVIECHGSFSTASCTKCRFKCNADA
LRADIFAQRIPVCPQCQPNKEQSVDASVAVTEEELRQLVENGIMKPDIVF
FGEGLPDEYHTVMATDKDVCDLLIVIGSSLKVRPVAHIPSSIPATVPQIL
INREQLHHLKFDVELLGDSDVIINQICHRLSDNDDCWRQLCCDESVLTES
KELMPPEHSNHHLHHHLLHHRHCSSESERQSQLDTDTQSIKSNSSADYIL
GSAGTCSDSGFESSTFSCGKRSTAAEAAAIERIKTDILVELNETTALSCD
RLGLEGPQTTVESYRHLSIDSSKDSGIEQCDNEATPSYVRPSNLVQETKT
VAPSLTPIPQQRGKRQTAAERLQPGTFYSHTNNYSYVFPGAQVFWDNDYS
DDDDEEEERSHNRHSDLFGNVGHNYKDDDEDACDLNAVPLSPLLPPSLEA
HIVTDIVNGSNEPLPNSSPGQKRTACIIEQQPTPAIETEIPPLKKRRPSE
ENKQQTQIERSEESPPPGQLAAV*

FI19438.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:28:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14221-PA 835 GF14221-PA 1..835 1..823 2960 78.1 Plus
Dana\GF23025-PA 394 GF23025-PA 80..356 222..502 516 36.8 Plus
Dana\GF20910-PA 312 GF20910-PA 48..230 224..406 171 27.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23816-PA 828 GG23816-PA 1..828 1..823 3672 93.1 Plus
Dere\GG23867-PA 385 GG23867-PA 78..354 222..501 538 37 Plus
Dere\GG18482-PA 312 GG18482-PA 48..230 224..406 176 29.4 Plus
Dere\GG17292-PA 325 GG17292-PA 40..271 217..481 169 24.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11392-PA 886 GH11392-PA 1..860 1..799 2553 64.9 Plus
Dgri\GH14148-PA 403 GH14148-PA 76..345 210..480 528 37.5 Plus
Dgri\GH12046-PA 304 GH12046-PA 42..226 224..408 187 29.2 Plus
Dgri\GH13301-PA 340 GH13301-PA 36..271 213..481 173 22.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:58
Subject Length Description Subject Range Query Range Score Percent Strand
Sirt1-PA 823 CG5216-PA 1..823 1..823 4341 100 Plus
Sirt2-PB 355 CG5085-PB 48..257 222..454 510 43.6 Plus
Sirt2-PA 355 CG5085-PA 48..257 222..454 510 43.6 Plus
Sirt4-PC 312 CG3187-PC 48..256 224..432 196 29.6 Plus
Sirt6-PB 325 CG6284-PB 36..270 213..480 173 23.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18096-PA 891 GI18096-PA 1..876 1..799 2518 65.2 Plus
Dmoj\GI10678-PA 345 GI10678-PA 13..309 174..485 522 34.7 Plus
Dmoj\GI22229-PA 387 GI22229-PA 87..367 219..502 500 35.5 Plus
Dmoj\GI16299-PA 303 GI16299-PA 42..226 224..408 177 28.1 Plus
Dmoj\GI18164-PA 334 GI18164-PA 37..271 214..481 164 23.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:28:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24742-PA 864 GL24742-PA 1..850 1..797 2735 71.1 Plus
Dper\GL23462-PA 377 GL23462-PA 76..332 222..503 548 39.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:28:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18743-PA 864 GA18743-PA 1..850 1..797 2736 71.1 Plus
Dpse\GA18650-PA 381 GA18650-PA 76..351 222..499 547 37.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:28:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10169-PA 824 GM10169-PA 1..824 1..823 4245 96 Plus
Dsec\GM23107-PA 386 GM23107-PA 75..290 218..456 531 42.6 Plus
Dsec\GM12631-PA 312 GM12631-PA 48..230 224..406 172 29.4 Plus
Dsec\GM26176-PA 325 GM26176-PA 40..271 217..481 172 24.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:28:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23867-PA 826 GD23867-PA 1..826 1..823 4279 96.5 Plus
Dsim\GD19348-PA 386 GD19348-PA 75..356 218..502 531 37.3 Plus
Dsim\GD16246-PA 312 GD16246-PA 48..230 224..406 173 29.4 Plus
Dsim\GD20725-PA 333 GD20725-PA 40..279 217..481 161 24.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:28:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16866-PA 860 GJ16866-PA 1..847 1..799 2618 67.3 Plus
Dvir\GJ23031-PA 345 GJ23031-PA 49..305 222..481 515 37.5 Plus
Dvir\GJ16687-PA 303 GJ16687-PA 42..224 224..406 172 29.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:28:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15314-PA 795 GK15314-PA 1..792 1..821 2361 64 Plus
Dwil\GK22445-PA 354 GK22445-PA 49..324 222..499 525 36.3 Plus
Dwil\GK15262-PA 337 GK15262-PA 40..271 217..481 176 24.2 Plus
Dwil\GK19907-PA 312 GK19907-PA 49..231 224..406 167 28.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:28:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18618-PA 828 GE18618-PA 1..828 1..823 3602 93.1 Plus
Dyak\GE25662-PA 385 GE25662-PA 78..354 222..501 528 36.6 Plus
Dyak\GE16799-PA 312 GE16799-PA 48..230 224..406 175 29.4 Plus
Dyak\GE24693-PA 325 GE24693-PA 36..270 213..480 174 23.9 Plus