Clone FI19444 Report

Search the DGRC for FI19444

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:44
Vector:pOT2
Associated Gene/TranscriptCG8854-RB
Protein status:FI19444.pep: gold
Sequenced Size:1948

Clone Sequence Records

FI19444.complete Sequence

1948 bp assembled on 2012-01-13

GenBank Submission: BT133027.1

> FI19444.complete
ACGGGCTCCATTTCAGATTTTAATTAAATAGTTTTTTGTTTTTTTAATGA
AATTTGATAAGTAAAGCAATTTGTTTTCGATGCCCGAAACGGGTGGATGG
GTTTTTTGTTAGTTTTCCTTTGACGTAAACCAGTCTGTTGGCTAATGGAA
TATCTCGGCTTATTGGCAATTGGAATGCCAATTGATTGGCCATGCTAAGT
TATGCAGATCCATAAACCGGCTAATGGTTGCAATCTGAAGTCGTGAAGTG
TAACACCTGCAAAAGATATAGCCAAGCCGGTGTGCAATTTTAAGCCGGCA
TTAATGCCGCGGAAAATTCGCGGCCAACGCCGAAGAACGGGTTCGATTCG
TTGACGGAAGAGTTTTCAGTATTGGCCACAAAGTGCGTTGCGTAAGCAAC
CAGTTGATGCACTTGCTCATGGCTTTCCCACACCACGCGCACCATCTCCG
CATTTTCCCAACCAATATTTATGTATTTTTTCTTTGCCTTTTTTTCTTAC
AGCATGCGTGAACGCAGTCAAACGACCCCAAGAAGGCGACGAGCCGGTCC
AAAACAGGCCTTACCTGGTGGCAGCTCCTCGGAGGGAGTGGGCGCCCTGG
AATCCCCCTATTATACCATTGACAACACGGAGGATATATATGGCACCACG
CTGCTGCCCTCGCAGCGCTGCTATGTGGATCCCTGGGATCTGGAGAACTA
TGATTATGTTCGCAAGAAGATCGATGATGTCACCGGTGGCGGTGGTGGTG
ATGGTGATGGTGAGGCAATTGAACCTGCCTACGGAGGTGGTGGCAACTCG
CTGACGACCAGTCCCACATACGGATACGGAGTGGGTGCCGCCGGTGCGGG
TATGGGTGTGGGCATGTCGGCCACAATGCCACGCCCCCACACCCAAAGTC
GCCGGGTGTCGCGTGCCCAGTGCCAACTTGAGTGCTGTGTGCCCCAAAGG
ACTCGTCGCCGTAGCCGCAGCGCTCGCAAGGAGCCACTCTATACGGCCAG
GAGCGATATTTACGGTGTGCCCAGCCGCTATGAGGACTACATGGCCACCA
TGACCAGGCAGTTGCACCTGGACAACGGCGAGGATGAGGAGCCGGAAGAT
CTTTACGGCGAGGAGCAGCGGCAACTGTACAATGGCTTTGGAGGCTTCTC
CAGCACCAGTTCCACGGAGCATCCCTCCTCCATTGGCGATGAGCAGCCCG
TTCTCCAACGACGCGCGGCCACGATGCAACGCCGCTCCGTGCCCAGCGAG
ATGCAGCGGAGCACCAACATGGTCGGCAGCTATGGAACTGCCCCCCATCC
GCGGCGCAAGCGAAGCGGTAAGGCGGCGCCCATGGCCGCTCCGCCGCAGA
TCGATTTCCCCGCACCGCCGCCACTTTCGCCCGCCTACGACTACTGTAAT
CCCTATGCTTCACTGCCGTACTGCAGCATACCGGATTGCAGCGAATGCCA
GCAGCAGATCTATGCCGCACCCTCCGCCCTCTACGGAACCATGGGCGGCT
TGGTGGGTGGTGATGGCAGTCGGGTTAGGGGCTCATCGCCCCATCATTCC
AGCGGTGGTGACTCGTCGCTCTACTCGGGAATTTACGCACGTAAATTCGG
ACTGAGCAAGAAGGGTCTACTGCAGATCGACTACTCATGCAGTTGGAACG
ATCTGGACAGGGTGATGCAGCGCCATTACTGAGATCCATGGGGCCGCATC
CACGTGGATCTGGGATTTGGGTGCTTGGGTTAGGCTAACTACCAACACGT
TTGCACCAATCGCGAACAGAAACCTTATTGTTATTTAAGTCATTTTGCAT
TACAGATACAAACACAAACACATACACACACACACACTGAAGACCAAATA
ACTGAAACATGTTTGTCGTAGATATATAGTGTTTTCATATTCATATTTAC
CGAATAAACATTTTGAAGTCAAGCATTAAAAAAAAAAAAAAAAAAAAA

FI19444.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:24:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8112906..8114055 1144..1 5550 99 Minus
chr2R 21145070 chr2R 8111664..8112449 1927..1142 3870 99.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:34
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12225703..12226846 1144..1 5720 100 Minus
2R 25286936 2R 12224459..12225246 1929..1142 3940 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:24:35 has no hits.

FI19444.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:25:31 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8111664..8112447 1144..1927 95 <- Minus
chr2R 8112907..8114055 1..1143 97   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-13 12:03:10 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
CG8854-RB 1..1179 504..1682 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:04 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
CG8854-RB 1..1179 504..1682 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:58:22 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
CG8854-RB 1..1179 504..1682 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-13 12:03:10 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
CG8854-RB 1..1927 1..1927 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:04 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
CG8854-RB 1..1927 1..1927 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:58:22 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
CG8854-RB 1..1927 1..1927 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:31 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12224461..12225244 1144..1927 100 <- Minus
2R 12225704..12226846 1..1143 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:31 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12224461..12225244 1144..1927 100 <- Minus
2R 12225704..12226846 1..1143 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:31 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12224461..12225244 1144..1927 100 <- Minus
2R 12225704..12226846 1..1143 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:04 Download gff for FI19444.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8111966..8112749 1144..1927 100 <- Minus
arm_2R 8113209..8114351 1..1143 100   Minus

FI19444.hyp Sequence

Translation from 470 to 1681

> FI19444.hyp
MYFFFAFFSYSMRERSQTTPRRRRAGPKQALPGGSSSEGVGALESPYYTI
DNTEDIYGTTLLPSQRCYVDPWDLENYDYVRKKIDDVTGGGGGDGDGEAI
EPAYGGGGNSLTTSPTYGYGVGAAGAGMGVGMSATMPRPHTQSRRVSRAQ
CQLECCVPQRTRRRSRSARKEPLYTARSDIYGVPSRYEDYMATMTRQLHL
DNGEDEEPEDLYGEEQRQLYNGFGGFSSTSSTEHPSSIGDEQPVLQRRAA
TMQRRSVPSEMQRSTNMVGSYGTAPHPRRKRSGKAAPMAAPPQIDFPAPP
PLSPAYDYCNPYASLPYCSIPDCSECQQQIYAAPSALYGTMGGLVGGDGS
RVRGSSPHHSSGGDSSLYSGIYARKFGLSKKGLLQIDYSCSWNDLDRVMQ
RHY*

FI19444.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG8854-PC 392 CG8854-PC 1..392 12..403 2109 100 Plus
CG8854-PB 392 CG8854-PB 1..392 12..403 2109 100 Plus

FI19444.pep Sequence

Translation from 470 to 1681

> FI19444.pep
MYFFFAFFSYSMRERSQTTPRRRRAGPKQALPGGSSSEGVGALESPYYTI
DNTEDIYGTTLLPSQRCYVDPWDLENYDYVRKKIDDVTGGGGGDGDGEAI
EPAYGGGGNSLTTSPTYGYGVGAAGAGMGVGMSATMPRPHTQSRRVSRAQ
CQLECCVPQRTRRRSRSARKEPLYTARSDIYGVPSRYEDYMATMTRQLHL
DNGEDEEPEDLYGEEQRQLYNGFGGFSSTSSTEHPSSIGDEQPVLQRRAA
TMQRRSVPSEMQRSTNMVGSYGTAPHPRRKRSGKAAPMAAPPQIDFPAPP
PLSPAYDYCNPYASLPYCSIPDCSECQQQIYAAPSALYGTMGGLVGGDGS
RVRGSSPHHSSGGDSSLYSGIYARKFGLSKKGLLQIDYSCSWNDLDRVMQ
RHY*

FI19444.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12076-PA 382 GF12076-PA 1..382 12..403 1504 78.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22592-PA 382 GG22592-PA 1..382 12..403 1691 89.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22979-PA 384 GH22979-PA 1..384 12..403 1025 57.9 Plus
Dgri\GH19660-PA 86 GH19660-PA 1..86 315..403 303 67.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG8854-PC 392 CG8854-PC 1..392 12..403 2109 100 Plus
CG8854-PB 392 CG8854-PB 1..392 12..403 2109 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18948-PA 379 GI18948-PA 1..379 12..403 994 57.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11262-PA 423 GL11262-PA 35..423 12..403 1334 73.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24662-PA 385 GA24662-PA 1..385 12..403 1363 73 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20373-PA 389 GM20373-PA 1..389 12..403 1957 96.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:33:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15235-PA 389 GD15235-PA 1..389 12..403 1973 96.9 Plus
Dsim\GD15236-PA 62 GD15236-PA 29..62 370..403 197 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:33:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21554-PA 373 GJ21554-PA 1..373 12..403 1127 62.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:33:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22116-PA 406 GK22116-PA 1..406 12..403 1200 63.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:33:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13462-PA 386 GE13462-PA 1..386 12..403 1699 89.3 Plus