Clone FI19471 Report

Search the DGRC for FI19471

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:71
Vector:pOT2
Associated Gene/TranscriptCG8179-RA
Protein status:FI19471.pep: gold
Sequenced Size:4808

Clone Sequence Records

FI19471.complete Sequence

4808 bp assembled on 2012-01-30

GenBank Submission: BT133157.1

> FI19471.complete
GGACGTGGTGTACGTCCGCCGCCGGTGGCCATGCCCATTCTGGGCGTACA
ACTGCAGCAACAGGAGCTGCAGCAGCAGCGCGGCGGACTGCCGGTGCCCA
GCCAAGATATATCTAGTAGCTCAGCACCATCGAGCCCCTCGCATCCGGGC
CGCAAGCTACTGTACGCCACCCGTGGAATGCGTGGTGGCAGCGTCGATCT
GCCGGACGAGATGGAGAAGTCGCAGTCCTCGGCCAGCACCTCGCCGTGCC
TCTCACCCAAAACCCATCGTCTGTTGCCCACGAATCTGTATGTCATCATC
TACAACTTCAAGGCGCGACATGCCGATGAACTGGATCTAAAGGCTGGCTA
CAAGGTGACTGTCATTGACAATTCAGATCCGGACTGGTGGAAGGGAAAAG
TGCTGGGACGAGTTGGATACTTCCCATCCAAGTACTGTGTGCGTCTGAAT
GCCAACGAGAAGCCACTGCAGGTGACCCACAATCTCCAGGTGTCGGACAG
TGAACGCGGCGAGAATCTTACCCTTCTAAGGGACCAGATTGTCATACAGA
CCGGCGACGAGGTAAACGGCATGGTAATGATCCGAGCCGCCGAGCACGGG
CAGGGCTACTGCCCCATCAAGTATCTGCAGGAGGTGTGACAGCCAGAAGA
GGACGAGCCGCCCTCCGACGAGCGGGACAGACCGCATAAGTCGTCCATGC
AGACGTCATCGTCGCGAACCGCGGACAAGACCAAGCGTAGGATTAGAATA
GTAGTGTCCGAAAACCACAACGTAGCTGCTAGTAGTGTTGCACCTGCACC
ACCCACAACCGCCTTCAACACCACCACCCATCACCAAATACCGAGGGAAT
CCGATATCGAGACGAAGCGGCTAAACATCGACTACGGCGATGAGGGCAGC
GCCGATTGGGATAAGGACCGCGAGGTGCTCATCCTGTCTGGGAGACGGAA
CAAGAATGATAAAAACTGGGAGAACTGGGAGCGCATCCGGGAGCAGAAGC
TGGAGAAGATGAAGGGCATTTGTTTCGAGAGCTATCGCCAGTCCAAGCGG
GACAAGTTACTTCAAGCTAAGCCACGACCCAAACAACTTGATTCCACCTG
GTATACGGATAACATCTACTCGAACCGCTCCGATGACATGGACGAGGACT
ACGTGCCTGATTGCTTGAAATACGGACCTTTCCGCACACTGAGGGACATC
CACGAGCTGGACGAGAAGAGTGGGGTTACGGAAGAACGTCGTGTTGAGGG
TGAAGGATCCCCCGGCTATGGCCTGCATCGTTCCAAGAGCTGCAAGGAGT
TTCAATACCCCAAGTCACAGAGTTGGTGCTTCGAGGGCAATGTTTTTGAA
GCTGGCGGCGGTGTGGCCAGCGGGAGTGGTAGTTCAAGCGGTGCTCCCCC
ACCAACCACCTCCATCCTGAAGAATCGAGCAGGTGTTCCCAAGTCATACT
CCTTCAGTGCCACCACTAAGACCATGCCGTTTGATATCATCGACTATGAG
CTGCCTCCTGTCTCGAATACGCGACGGGAGAAGAAGGAGGCTCTAAGGCG
GAACATGAATGCCCTCTGCAGCAGCAGCCTGGATCGATGTTGCGCCCGGG
ATCAGTGCACCAGCGCCCGCTGCCTGTTGGAGGACATCTATCCGGGATCG
AGGATGCGACCAAGGACAACCGGGGCGGGCAGCAATCGAAATCTAAGTGC
GGCGGATTGGCTATTCGAGGAGCGGGCTGGAAGGCAGAGAACGCCCGCCG
CTCCAACGGTTATTTGTTGTTGCTCTGCGGCGGAGGATTGTTGTTGCCAT
CGCCAGCGGCAGCAGCAACCGCCACTTCCCGCTCGCCCAAGATCACGACC
CCTATGTCCCGGTCATCATCCCGCCGCCGAGGAGGAGGAGCACATGCACT
GCCGTTATGACACCGACCTGGAGCACTTCATACGCGCCGAGCGCGAGCGC
CTCATGCTGCAGGATAAGTTCCTGGACGATGATGAGCGGTATTTAGCCGC
TGCTCCGGCTCCGCGTAGTCCTGGCAGACGGTATCCGGCGGGAAACTATC
ACCGGCCTCCGCGCAGCAAGTCACTGTTGGAGATGCAGCCGCCAACAATT
CTGTACGACGAGGACACCTGTTCGGACACCACAGAGATCGATTTGGAGGA
CTTCAACATTGACCTGGAAAAGTACTGGGAGCAGCTGGACAAGCCACCCA
GTCCCATCAACATGGACATGCGGCGGAACATGCATAGCAGTCTCAAGGTG
AAGAACGTGAATGTCCGGTGCTACAACAATGGCCAGCCCATCGATCTGCA
TGACCGTGAGCATGAGCGGCTGATGATCAAGAAATCGCTGCTCGAGGGGA
TGCCCTCGCCACCGCAGCTGGACTCCAGCGAGTCCTCGACCAATGCGGGC
GGCTATCCTTTTTTTGACACCGCTCCCGCCGTTGCGCCTGCCCCCGCCTT
CCACCACCATCCGGCCTACGGACAACCGCAGGGCTATGGCCACAAGGTGT
ATCCCACGGTGGACACGCTGCCCTCTTATCAGTACAACAACTTCTACCCC
GAGCACAGCCATCCGACCGTGGGAAGTGTGCTGACTCAGCAGCCGACAGC
TGGTATCCATCATCCATCCGCCGGCGGTCACTCGGCGCTCAGCCTGATCA
ACAACATATTTTCAATCTACAAGCCCAACAAGTACTCGCCGGAGAACTGC
CAGATGAACTACGAGAGCAAGCCGGAACCGTGCAAGAAGATGAATGTGCC
CAGTACCCACAGGCCCCTGGGAGCAGCCGCGCATCCGTATCCTGCCCACG
ACTACATGCACTCTTCGATGAAGAGACCGCTGCTGGTGAGCGCCGATCAG
CCGCACTTTAAGATCATTCCGGAAAAGACTGGGCTAAAGATCTCGCCTCT
GCTGAGCTACGAGGATTACGGCGGAGGTGGAGGTGGCGAGAAGGCGCACC
ACAGACTGACTAGCACGGCAAGGCCTCTGATGCTTCCGCACTGATGGTGC
TGGACCTTTCCGTGGTATGGCAATGGCAATGGCAATGGCAACTATTGTTA
GTTGGGCTCCCACCCATCCAACTATCCCCAAAAAAGACTCGCGAGCAGCG
AACAGCAACCCAAACGCACAAGAAAACTGGGTCCAGCCAAGGAAGAATAA
CATACGTTAACAGATATCCATCGGAGGAGCATCGGGATCAGGAGGTGGCT
AGCTAATCAGAATCCTACCCGACACCCTCCACCTTCCACTCCACCAACTC
GCCGTCTTCGTCGTCGTCGTCGTCCATCCGCACAATTTGCTTTTGGTTTA
GCAGGTGCTTTGGTCAGGTGTTCCATCGAAGCATCATTGACACTCCAGCA
ACGGTAAACCACTCGAACAACAACAGCAACTACAGCCATACCATTGGAAA
TCAACAGCACTTCAGACAACATCAACAGATCTACCAACAGCCACATGTCA
GATGGAGGTCGCAGTGCAAGTACTTGTAAAGATTTGATCAACGGATCGAT
TAGGATAAGGATAAGCCCACACAGTCCTCACCCCAAACAATGGACACAGA
GACACACACATATGTATACAATCAACGTGCTTTTAATTCGCTTAGAATCG
CTATAGAAATCGCGTTGCAGTTCGATTAACCACTAATCAACAGATTCACT
AATTTTCGAGCAACTTTTAAGCAATCAAGAGCGTATTCAATAGAAAAAAG
AGTAGATATAAGACGGAAGAGTTAAGTATTAAGCTGTTCATATCGCGCGT
TTCATATTTCAGTATGCGCATATTGTATACCCTAACTCTCTGTAGAAAAC
TAAACGGATTTTATTAGTACTGAAGATTTGGGAGAATACATACATACATA
CCTAGACTCGTGAGTGTCAGCGAGACTTATTTTGGCCTCAATATATTGCG
ATAATTTTGAGATGCAAATGAAAACTAAGGCGAACCGTTTTTATTGTCAT
CAAATTTTTTCTATTTTTTATACCAAATAACTTTGAATCAACTAAACGGG
AGGAGTTATTGAAATTGCTATGCTCGATAAGGCTAGGAGCTTTTCCCATA
AGTTGCGGCTACTAGGAGCGATTATACGAAAGCATGCCTATGCTATTTAT
ATATATGATTAGGTGCGGTACGGATAGGTGTGCGTTGAGAACTCGATAGA
AGCGCTTTTTATAAACTAACTAGATTTGTATCGAAATGTGAAACATTGAA
TATGATAAACATGAATTGTACTTTTATGATGTATGCGTATCCACTGGCCT
TATTTATTGAGAAGTAACCAAACAATGAGCTGAACCCCAACACACACAAG
TGAACACACACATACACGAGAACACAGCGAGCGACAAAGAGATCCCAGAA
AAACAACTTGAGAATTACAATTGAATTTTCACTAAGATTCAGGCTTAGGG
CTTTGCGTCACTTTTGTTAATTGTTTTTTGGCGTCCAATTTTACATGATA
ACTATTGTAGGACTCTAGACAAGCAAATCGAAACTATCGAGAGTAGATTA
ACTATCGAGTATTTTGTAGTGCGTAAGCTAACTAAAACATAAACCAAACC
AAATGGAGATAACTTTTTAGCGCGAGACTCCTTGTGCAGGAAGATTTTGA
ATTTGAATTTATTTTTAACGACTTTTGAATACAAGACGAAACAATGAAGA
TGACATTTTATCAGAGATCGTTTTTTACCTATTTAACATTTCCTCGAACC
ACATACAAAACAACTATTTGCTAAGTGTACCCTATGGCCTATGAGTTAGT
TATAAGAAAGTGTTTTCCAAGCCCCGCTTAGACCACAACACTAAAAAAAA
AAAAAAAA

FI19471.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:57:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 11353993..11358237 548..4792 20880 99.5 Plus
chr2R 21145070 chr2R 11353723..11353919 353..549 985 100 Plus
chr2R 21145070 chr2R 11352505..11352641 122..258 685 100 Plus
chr2R 21145070 chr2R 11346291..11346414 1..124 605 99.2 Plus
chr2R 21145070 chr2R 11352796..11352895 259..358 500 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15466847..15471105 548..4806 21280 100 Plus
2R 25286936 2R 15466577..15466773 353..549 985 100 Plus
2R 25286936 2R 15465355..15465491 122..258 685 100 Plus
2R 25286936 2R 15459144..15459267 1..124 620 100 Plus
2R 25286936 2R 15465650..15465749 259..358 500 100 Plus
Blast to na_te.dros performed 2019-03-15 12:57:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2354..2485 3328..3453 142 62.2 Plus

FI19471.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:58:25 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 11346291..11346414 1..124 99 -> Plus
chr2R 11352508..11352641 125..258 100 -> Plus
chr2R 11352796..11352891 259..354 100 -> Plus
chr2R 11353725..11353919 355..549 100 -> Plus
chr2R 11353995..11358237 550..4792 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-30 12:38:00 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
CG8179-RA 1..2298 697..2994 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:05:58 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
CG43729-RI 2647..2777 1..127 96 <- Plus
CG43729-RI 2990..5856 128..2994 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:17:19 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
CG43729-RI 2647..2777 1..127 96 <- Plus
CG43729-RI 2990..5856 128..2994 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-30 12:38:00 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
CG34318-RA 214..5005 1..4792 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:05:58 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
CG43729-RK 4906..9697 1..4792 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:17:19 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
CG43729-RO 5890..6012 1..123 100 -> Plus
CG43729-RO 6257..10924 124..4792 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:58:25 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15465650..15465745 259..354 100 -> Plus
2R 15466579..15466773 355..549 100 -> Plus
2R 15459144..15459267 1..124 100 -> Plus
2R 15465358..15465491 125..258 100 -> Plus
2R 15466849..15471091 550..4792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:58:25 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15465650..15465745 259..354 100 -> Plus
2R 15466579..15466773 355..549 100 -> Plus
2R 15459144..15459267 1..124 100 -> Plus
2R 15465358..15465491 125..258 100 -> Plus
2R 15466849..15471091 550..4792 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:58:25 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15465650..15465745 259..354 100 -> Plus
2R 15466579..15466773 355..549 100 -> Plus
2R 15459144..15459267 1..124 100 -> Plus
2R 15465358..15465491 125..258 100 -> Plus
2R 15466849..15471091 550..4792 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:05:58 Download gff for FI19471.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11346649..11346772 1..124 100 -> Plus
arm_2R 11352863..11352996 125..258 100 -> Plus
arm_2R 11353155..11353250 259..354 100 -> Plus
arm_2R 11354084..11354278 355..549 100 -> Plus
arm_2R 11354354..11358596 550..4792 100   Plus

FI19471.pep Sequence

Translation from 696 to 2993

> FI19471.pep
MQTSSSRTADKTKRRIRIVVSENHNVAASSVAPAPPTTAFNTTTHHQIPR
ESDIETKRLNIDYGDEGSADWDKDREVLILSGRRNKNDKNWENWERIREQ
KLEKMKGICFESYRQSKRDKLLQAKPRPKQLDSTWYTDNIYSNRSDDMDE
DYVPDCLKYGPFRTLRDIHELDEKSGVTEERRVEGEGSPGYGLHRSKSCK
EFQYPKSQSWCFEGNVFEAGGGVASGSGSSSGAPPPTTSILKNRAGVPKS
YSFSATTKTMPFDIIDYELPPVSNTRREKKEALRRNMNALCSSSLDRCCA
RDQCTSARCLLEDIYPGSRMRPRTTGAGSNRNLSAADWLFEERAGRQRTP
AAPTVICCCSAAEDCCCHRQRQQQPPLPARPRSRPLCPGHHPAAEEEEHM
HCRYDTDLEHFIRAERERLMLQDKFLDDDERYLAAAPAPRSPGRRYPAGN
YHRPPRSKSLLEMQPPTILYDEDTCSDTTEIDLEDFNIDLEKYWEQLDKP
PSPINMDMRRNMHSSLKVKNVNVRCYNNGQPIDLHDREHERLMIKKSLLE
GMPSPPQLDSSESSTNAGGYPFFDTAPAVAPAPAFHHHPAYGQPQGYGHK
VYPTVDTLPSYQYNNFYPEHSHPTVGSVLTQQPTAGIHHPSAGGHSALSL
INNIFSIYKPNKYSPENCQMNYESKPEPCKKMNVPSTHRPLGAAAHPYPA
HDYMHSSMKRPLLVSADQPHFKIIPEKTGLKISPLLSYEDYGGGGGGEKA
HHRLTSTARPLMLPH*

FI19471.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:23:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13041-PA 794 GF13041-PA 1..794 1..765 3181 83.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20523-PA 999 GG20523-PA 234..999 2..765 4077 98.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:23:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20241-PA 808 GH20241-PA 1..808 1..765 2760 68.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG43729-PJ 1970 CG43729-PJ 1187..1951 1..765 4169 100 Plus
CG43729-PI 1951 CG43729-PI 1187..1951 1..765 4169 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19410-PA 835 GI19410-PA 16..835 10..765 2590 68.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20070-PA 905 GL20070-PA 108..905 1..765 2521 67.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30479-PG 2008 GA30479-PG 1225..2008 4..765 3007 78.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:23:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21615-PA 765 GM21615-PA 1..765 1..765 4073 98.3 Plus
Dsec\GM15458-PA 244 GM15458-PA 2..244 523..765 1291 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11119-PA 997 GD11119-PA 234..997 2..765 4088 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22474-PA 971 GJ22474-PA 237..971 55..765 2715 74.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:23:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23023-PA 757 GK23023-PA 2..757 8..765 3089 76.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11706-PA 997 GE11706-PA 234..997 2..765 4024 97.5 Plus

FI19471.hyp Sequence

Translation from 696 to 2993

> FI19471.hyp
MQTSSSRTADKTKRRIRIVVSENHNVAASSVAPAPPTTAFNTTTHHQIPR
ESDIETKRLNIDYGDEGSADWDKDREVLILSGRRNKNDKNWENWERIREQ
KLEKMKGICFESYRQSKRDKLLQAKPRPKQLDSTWYTDNIYSNRSDDMDE
DYVPDCLKYGPFRTLRDIHELDEKSGVTEERRVEGEGSPGYGLHRSKSCK
EFQYPKSQSWCFEGNVFEAGGGVASGSGSSSGAPPPTTSILKNRAGVPKS
YSFSATTKTMPFDIIDYELPPVSNTRREKKEALRRNMNALCSSSLDRCCA
RDQCTSARCLLEDIYPGSRMRPRTTGAGSNRNLSAADWLFEERAGRQRTP
AAPTVICCCSAAEDCCCHRQRQQQPPLPARPRSRPLCPGHHPAAEEEEHM
HCRYDTDLEHFIRAERERLMLQDKFLDDDERYLAAAPAPRSPGRRYPAGN
YHRPPRSKSLLEMQPPTILYDEDTCSDTTEIDLEDFNIDLEKYWEQLDKP
PSPINMDMRRNMHSSLKVKNVNVRCYNNGQPIDLHDREHERLMIKKSLLE
GMPSPPQLDSSESSTNAGGYPFFDTAPAVAPAPAFHHHPAYGQPQGYGHK
VYPTVDTLPSYQYNNFYPEHSHPTVGSVLTQQPTAGIHHPSAGGHSALSL
INNIFSIYKPNKYSPENCQMNYESKPEPCKKMNVPSTHRPLGAAAHPYPA
HDYMHSSMKRPLLVSADQPHFKIIPEKTGLKISPLLSYEDYGGGGGGEKA
HHRLTSTARPLMLPH*

FI19471.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:50:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG43729-PJ 1970 CG43729-PJ 1187..1951 1..765 4169 100 Plus
CG43729-PI 1951 CG43729-PI 1187..1951 1..765 4169 100 Plus