Clone FI19475 Report

Search the DGRC for FI19475

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:75
Vector:pOT2
Associated Gene/TranscriptEnt3-RA
Protein status:FI19475.pep: gold
Sequenced Size:2824

Clone Sequence Records

FI19475.complete Sequence

2824 bp assembled on 2012-02-08

GenBank Submission: BT133211.1

> FI19475.complete
GCAAGCAGATGTCTCTTGAAAAGCGGTTGAAATATATCTTGTAAATAGTG
AATGTGCTATTGAATTCAGTTCAATTAAAGGGCGTAACCGCCAAATCAGA
TGATAGTTGGTGTTAAAAAAATGCCAAGTGGCTAATTGCTCAGCCACTTG
TGTCTGTTTTTTGTTTTTTGTTTATCGATTTGTGTATAACGACGAACTTG
CACCCTATATGTACATATGTATGTAAGTACGGCAGGCAAAACAACAGAGC
AGAACTCACGCCCACTAAGTTGGCCAAAGTGGAAAATAATGCCAAGGTCC
AAGAACCACAGGGAGTAATTAAATAGGATTTGCCAGCGGAAATCGTCGCA
TAAAATAAGAGTACAACATCATGGATGTTGGTGGCCAGGAAACCACCTAT
GAGCCGCTGGACGGACGTGGTTCCGGGCGTTCGAGGAGCAGTCATTCCAC
AACCGGATCCGGCCTGAGGCGTCCAGGCAGCATGGACAGTCCGGAGTTCG
ATAACCGTGCACCCAAGGATCAGAGGCACTCCGTCTACCTGGCCCTACTG
GCAGCGGGCATTGGTTTTGTGTTGCCCTACAATAGTTTCATTATTGCGGC
GGACTACTGGCAGGCACGATTCCCGGGTCGCCCGGTAGCCCTGGACATGT
CGATGACATACATCTTCGTTGCCTTCGGCACCGTTTTGATGAACAACATT
GTGCTATCGGTGGCACCGTTCCAGTCGCGAGTGCTCTTTGGCTACATGAT
ATCCTTCACCACACTGATCTTTGTCGCGGTGTGCGAGGTGGCTTGGCATA
TGTTCGCCACAAATACCGCCTATTTGGTGAATATGTCAGCTGTTGCCCTG
ACCGCCATCGGATGTACTGTGCAGCAGTCGAGCTTCTATGGATTCGCCTC
CATGCTGCCCAAGCAGTATACCCAGGCGGTGATGGCCGGCGAGAGTATCG
CCGGTTTCCTGGTGTCTTCCAATCGGGTCGTTACCAAATTGCTGATTAAC
AACGATCGCGTGTCCACGGTGATCTTCTTTTTGACCTCAACGCTCTACAT
ACTCTTCAGCTACCTGTTGCATGTGGCCACCATTAACTCGCCGTTTGTGC
GGTTCCATGTGGAGGCCTGCTCCAAGATCGTTTTGCGGCCGGATGAGCAG
GAGATTGATGGAGTTCCAAGTAGTACTCGATATGGTGTGCTCTCGATGGA
CGGTACCCACACCACGACCACATCGGTTGGACCTCCAGGCACTGGAAATA
CCCTTAGTTTTAGCAATCCCGTCTACGAGCTATCCAACCCGACTGCCGGC
GAGAGTAGCATTGAAGCCCTCGGACAGCTGCCCGAACTTCCGGCCACGCC
CCCAGCTCAGGAGCCTACAACGCCCACGACGGTGGCCTTCAAGGTGGAAC
ACGTTATCACGCCACGTCGTTGCCGGCCCAGCAAGTTGGGTGACATCCGC
GAGGGATTCGTGACCCGATGGCGAGTGGCCCAGGTGATCTACCCGCACAT
GGTGTGCATCGCCTTGGCCTATTGTGTGACCCTCTCGCTGTATCCGGGTA
TCGAGGTTGAGGTGCAGTCATGTGCCCTTCGCTCCTGGATGCCCGTGCTG
TTGATGTTCTGCTTTAATACGTCGGATGTGGTTGGCAAGATACTGGCCGC
CAGTCCGTATCCATGGTCGCGTCGCCAACTGATCCTGCTGTCGGGACTAA
GGATTGTGCTGGTGCCGCTCCTGCTCCTCTGCTGTGCTCCCCGCCAGCGT
CCCGTGATATCCGGCGAGACGGCGCCGTTTGTCTTCACCATCGCTCTGGG
CATCACGAATGGATTGGCAGGCAGCCTGCCCATGATGTTGGCACCGGCAA
AGGTGCCGGGAACACTCAAGGAGGTCACTGGCAATATAATGACCCTGTCG
TATAATGTTGGTCTGACGGTGGGCTCTCTGATTGGATACGTTTTCGAGAG
TATGCTGGGACCGCAGCTGGTGAATCCGTGTCCCACATATCCCTATGTGC
CCGCCTCGATGCTGGAACAGTTCCATGGTCACGGGCATGGACATGGCCAT
CTACCACATCCTCTGCCGCTGACTAGCACCAGCACAATGAGTCCACCAAC
TACGGGGGCCACCACATTGGCGCCACTACTGCTCAACACCACGCTGGCTA
CGCTTAGTAGCTCTAGCTCCACCACCAGCACCGCCAGTCCGGCACTGGCC
ACCGTTATCACAACCACAGCTCTGGCGCTCGCCAGTACGGTGGCCAGCGG
AAGTGCCGAGGTGATTAATGCCACCATATCATCGATCCTGTCCACGGTCA
GCAGTTCGGTGGGCGATATCAGCGACGAGATGACCACAGATCCTCAGACG
CCAGATGCACTGCTCGAAAATATCTAAGCGATATTTGAATTTATTAAGAC
TTGGAAAGAGTCCATGCGACACATTGTACACAGCCATATCTAACATTAAC
AAGATTCCGTTGACTTCAATTTCAAATCCTAAAATCTAAATTAAATGCTC
CAAGAAGTGGCAGAAATTTAGATTTTGAAAAATGGTTGCTAGAAAGCAGG
AAATTGATTGCATACACACTTATTAACTTCACTCTTTCGTCTTTTCATGC
CCGCGAACAATAATTTTCAATAGTTAATAGGTTTTTGGCTAGTTGGCTAG
TTAAATGAGTAAAAACCAACTGAAAGTCTTAACAAAACCGTTTAAATCAA
ATCAAGTAATGCACATTTAATGATGATCAATTTTCTAGCGCTTTGATGTG
GCTAATGAAATACGTAAAATGTCAGATTTTCCGAGTATATATACACAATG
CTCAAGAAAAAAAAAAAAAAAAAA

FI19475.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:09:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 12845817..12847235 1388..2806 6900 99.1 Plus
chr3L 24539361 chr3L 12844014..12844597 1..585 2815 99.1 Plus
chr3L 24539361 chr3L 12844781..12845344 584..1147 2760 99.3 Plus
chr3L 24539361 chr3L 12845517..12845767 1146..1396 1255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 12855486..12856921 1388..2823 7165 99.9 Plus
3L 28110227 3L 12853679..12854263 1..585 2925 100 Plus
3L 28110227 3L 12854450..12855013 584..1147 2820 100 Plus
3L 28110227 3L 12855186..12855436 1146..1396 1255 100 Plus
Blast to na_te.dros performed 2019-03-15 13:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 672..706 196..231 123 86.1 Plus

FI19475.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:11:04 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 12845519..12845764 1148..1393 100 -> Plus
chr3L 12845823..12847235 1394..2806 99   Plus
chr3L 12844014..12844597 1..585 99 -> Plus
chr3L 12844783..12845344 586..1147 99 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-08 14:51:38 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
Ent3-RA 1..2007 371..2377 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:08:27 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
Ent3-RA 1..2007 371..2377 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:23:21 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
Ent3-RA 1..2007 371..2377 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-08 14:51:38 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
Ent3-RA 24..2829 1..2806 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:08:27 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
Ent3-RA 34..2839 1..2806 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:23:21 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
Ent3-RA 34..2839 1..2806 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:04 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12853679..12854263 1..585 100 -> Plus
3L 12854452..12855013 586..1147 100 -> Plus
3L 12855188..12855433 1148..1393 100 -> Plus
3L 12855492..12856904 1394..2806 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:04 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12853679..12854263 1..585 100 -> Plus
3L 12854452..12855013 586..1147 100 -> Plus
3L 12855188..12855433 1148..1393 100 -> Plus
3L 12855492..12856904 1394..2806 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:04 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
3L 12853679..12854263 1..585 100 -> Plus
3L 12854452..12855013 586..1147 100 -> Plus
3L 12855188..12855433 1148..1393 100 -> Plus
3L 12855492..12856904 1394..2806 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:08:27 Download gff for FI19475.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 12846779..12847363 1..585 100 -> Plus
arm_3L 12847552..12848113 586..1147 100 -> Plus
arm_3L 12848288..12848533 1148..1393 100 -> Plus
arm_3L 12848592..12850004 1394..2806 100   Plus

FI19475.hyp Sequence

Translation from 370 to 2376

> FI19475.hyp
MDVGGQETTYEPLDGRGSGRSRSSHSTTGSGLRRPGSMDSPEFDNRAPKD
QRHSVYLALLAAGIGFVLPYNSFIIAADYWQARFPGRPVALDMSMTYIFV
AFGTVLMNNIVLSVAPFQSRVLFGYMISFTTLIFVAVCEVAWHMFATNTA
YLVNMSAVALTAIGCTVQQSSFYGFASMLPKQYTQAVMAGESIAGFLVSS
NRVVTKLLINNDRVSTVIFFLTSTLYILFSYLLHVATINSPFVRFHVEAC
SKIVLRPDEQEIDGVPSSTRYGVLSMDGTHTTTTSVGPPGTGNTLSFSNP
VYELSNPTAGESSIEALGQLPELPATPPAQEPTTPTTVAFKVEHVITPRR
CRPSKLGDIREGFVTRWRVAQVIYPHMVCIALAYCVTLSLYPGIEVEVQS
CALRSWMPVLLMFCFNTSDVVGKILAASPYPWSRRQLILLSGLRIVLVPL
LLLCCAPRQRPVISGETAPFVFTIALGITNGLAGSLPMMLAPAKVPGTLK
EVTGNIMTLSYNVGLTVGSLIGYVFESMLGPQLVNPCPTYPYVPASMLEQ
FHGHGHGHGHLPHPLPLTSTSTMSPPTTGATTLAPLLLNTTLATLSSSSS
TTSTASPALATVITTTALALASTVASGSAEVINATISSILSTVSSSVGDI
SDEMTTDPQTPDALLENI*

FI19475.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:52:59
Subject Length Description Subject Range Query Range Score Percent Strand
Ent3-PC 668 CG11010-PC 1..668 1..668 3423 100 Plus
Ent3-PA 668 CG11010-PA 1..668 1..668 3423 100 Plus
Ent3-PB 667 CG11010-PB 1..667 1..668 3406 99.9 Plus
Ent1-PC 476 CG11907-PC 58..292 48..272 188 23.7 Plus
Ent1-PB 476 CG11907-PB 58..292 48..272 188 23.7 Plus
Ent1-PC 476 CG11907-PC 305..476 368..529 177 29.7 Plus

FI19475.pep Sequence

Translation from 370 to 2376

> FI19475.pep
MDVGGQETTYEPLDGRGSGRSRSSHSTTGSGLRRPGSMDSPEFDNRAPKD
QRHSVYLALLAAGIGFVLPYNSFIIAADYWQARFPGRPVALDMSMTYIFV
AFGTVLMNNIVLSVAPFQSRVLFGYMISFTTLIFVAVCEVAWHMFATNTA
YLVNMSAVALTAIGCTVQQSSFYGFASMLPKQYTQAVMAGESIAGFLVSS
NRVVTKLLINNDRVSTVIFFLTSTLYILFSYLLHVATINSPFVRFHVEAC
SKIVLRPDEQEIDGVPSSTRYGVLSMDGTHTTTTSVGPPGTGNTLSFSNP
VYELSNPTAGESSIEALGQLPELPATPPAQEPTTPTTVAFKVEHVITPRR
CRPSKLGDIREGFVTRWRVAQVIYPHMVCIALAYCVTLSLYPGIEVEVQS
CALRSWMPVLLMFCFNTSDVVGKILAASPYPWSRRQLILLSGLRIVLVPL
LLLCCAPRQRPVISGETAPFVFTIALGITNGLAGSLPMMLAPAKVPGTLK
EVTGNIMTLSYNVGLTVGSLIGYVFESMLGPQLVNPCPTYPYVPASMLEQ
FHGHGHGHGHLPHPLPLTSTSTMSPPTTGATTLAPLLLNTTLATLSSSSS
TTSTASPALATVITTTALALASTVASGSAEVINATISSILSTVSSSVGDI
SDEMTTDPQTPDALLENI*

FI19475.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:26:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23579-PA 673 GF23579-PA 1..673 1..668 2871 91.4 Plus
Dana\GF24827-PA 481 GF24827-PA 310..481 368..529 177 30.1 Plus
Dana\GF24827-PA 481 GF24827-PA 60..283 45..252 157 21.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:26:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15604-PA 668 GG15604-PA 1..668 1..668 3478 99 Plus
Dere\GG24654-PA 476 GG24654-PA 305..476 368..529 168 28.3 Plus
Dere\GG24654-PA 476 GG24654-PA 11..290 3..270 163 21.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:26:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17074-PA 660 GH17074-PA 1..660 1..668 2762 82.9 Plus
Dgri\GH11145-PA 492 GH11145-PA 319..492 368..529 177 29.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:24:29
Subject Length Description Subject Range Query Range Score Percent Strand
Ent3-PC 668 CG11010-PC 1..668 1..668 3423 100 Plus
Ent3-PA 668 CG11010-PA 1..668 1..668 3423 100 Plus
Ent3-PB 667 CG11010-PB 1..667 1..668 3406 99.9 Plus
Ent1-PC 476 CG11907-PC 58..292 48..272 188 23.7 Plus
Ent1-PB 476 CG11907-PB 58..292 48..272 188 23.7 Plus
Ent1-PA 476 CG11907-PA 58..292 48..272 188 23.7 Plus
Ent1-PC 476 CG11907-PC 305..476 368..529 177 29.7 Plus
Ent1-PB 476 CG11907-PB 305..476 368..529 177 29.7 Plus
Ent1-PA 476 CG11907-PA 305..476 368..529 177 29.7 Plus
Ent2-PA 458 CG31911-PA 50..266 47..252 177 25.8 Plus
Ent2-PB 458 CG31911-PB 50..266 47..252 177 25.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:26:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11668-PA 657 GI11668-PA 1..657 1..668 2801 81.4 Plus
Dmoj\GI17852-PA 464 GI17852-PA 291..464 368..529 156 28.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:26:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22687-PA 438 GL22687-PA 14..438 259..668 1538 80.3 Plus
Dper\GL22686-PA 234 GL22686-PA 1..230 1..234 1061 86 Plus
Dper\GL19271-PA 482 GL19271-PA 309..482 368..529 197 32 Plus
Dper\GL19271-PA 482 GL19271-PA 59..294 45..270 159 21.5 Plus
Dper\GL25678-PA 455 GL25678-PA 49..279 48..266 159 22.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:26:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10708-PA 678 GA10708-PA 1..678 1..668 2729 82.6 Plus
Dpse\GA11273-PA 482 GA11273-PA 309..482 368..529 194 31.4 Plus
Dpse\GA16558-PA 455 GA16558-PA 49..279 48..266 159 22.7 Plus
Dpse\GA11273-PA 482 GA11273-PA 59..294 45..270 155 21.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:26:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25377-PA 668 GM25377-PA 1..668 1..668 3489 99.6 Plus
Dsec\GM16673-PA 476 GM16673-PA 11..290 3..270 172 22.9 Plus
Dsec\GM16673-PA 476 GM16673-PA 305..476 368..529 171 30.6 Plus
Dsec\GM16179-PA 458 GM16179-PA 50..273 47..263 163 26.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:26:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14411-PA 668 GD14411-PA 1..668 1..668 3503 99.9 Plus
Dsim\GD22962-PA 476 GD22962-PA 305..476 368..529 171 30.6 Plus
Dsim\GD22962-PA 476 GD22962-PA 11..290 3..270 169 22.9 Plus
Dsim\GD23420-PA 458 GD23420-PA 50..273 47..263 164 26.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:26:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11346-PA 657 GJ11346-PA 1..657 1..668 2814 83 Plus
Dvir\GJ17347-PA 488 GJ17347-PA 320..488 373..529 177 30.8 Plus
Dvir\GJ13720-PA 456 GJ13720-PA 6..265 5..251 165 24.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16831-PA 752 GK16831-PA 89..752 33..668 2742 81 Plus
Dwil\GK23885-PA 482 GK23885-PA 309..482 368..529 174 29.8 Plus
Dwil\GK23885-PA 482 GK23885-PA 56..293 45..272 169 19.8 Plus
Dwil\GK15325-PA 453 GK15325-PA 46..261 47..252 168 25 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:26:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21931-PA 668 GE21931-PA 1..668 1..668 3491 99.6 Plus
Dyak\GE16173-PA 476 GE16173-PA 11..290 3..270 172 22.9 Plus
Dyak\GE16173-PA 476 GE16173-PA 305..476 368..529 169 29.1 Plus
Dyak\GE13988-PA 458 GE13988-PA 50..273 47..263 155 25.8 Plus