Clone FI19481 Report

Search the DGRC for FI19481

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:81
Vector:pOT2
Associated Gene/TranscriptCG11388-RA
Protein status:FI19481.pep: gold
Sequenced Size:1565

Clone Sequence Records

FI19481.complete Sequence

1565 bp assembled on 2012-01-13

GenBank Submission: BT133021.1

> FI19481.complete
AAAATGTTCTGTGCGCTTCTGCTCGTCTGCTCAGAGTTTCCGTTTAGTGT
TTTCTAACGTTGGCCTCCATATGTCCCATAATATGTTCGTTGACGCCGAC
GTACTGTTGCAATAGGTACTCCTCCGCTGATTTCGAAATGGCCAAGAACA
GCTTTAAGACTTTAATCAGCCAGAAACACAAAACGTTTCCGGCGGACCTA
AATATGTACGGAATGAAGTGTAAATCGCAGCTGCTGGAGGATCAGGAGAA
CGTGACCCTGATCATCAATCGGCGGAACTCAATCCGCCAGAAGCCGAAGA
GTTGGGCTTGGACCCTGCTGCGTTGCAGGTGGCAAAAGAAGCTAGTTCTC
TTATTAATATTTATTTGTGTGTGCGTTCTGATTGTTTTCGCCAACACGCA
TCTCTTGGTTCGCGGCAACATCCTCTCGGCCTTCCTCTCGAGCCGGCTTA
ACAAGCATTCGCACGCGGAGAAGCAGGAGGCGAGGTATCCCGACATCCCG
GCCACGACCCCGTCAGTTCCCCCGGTGCTGAGGCCCACGCACTATCTGCT
CAACTACTCCTCCACCCAGCTGGAGCTGAGCTCGCACTTGAACGGTCTGT
CCTCAGACTACAACATATTCGTCATCTACACGCGGGAGAACTACCACTTG
AACCTTAAGTTCGACCTGTTCGCCCACAGCTTGCTGAAGCACACCAGTGC
CCAGCTGCATCTGCACGTGATCACGGACAGCGAGAGCCAGCCCTCGGTGC
TGGAGATCCTGCAGCGACAGATCAGGCGGTTCCGGCGGACGGTCATATAC
ACCATATACGACGTGAAGGTCTGCTCCAGCATCATACAAGACATAGCCGC
CAAGTTGTCCCCGTACTTCAGCTCAACCCCGAACTCGTACTACAGCGACT
CCCTCTTTTTCCTGTCCCTCGGCCTTCACAGGATCGCCGACAGGAGCCTA
AACAGAGCCATTCTGCTAGATTGTGATATAGTCTTCCGATCCGATGTCCG
ACTGCTGTTCAATGAGTTCGACAACTTTCTGCCGCACCAGCTGTACGGAC
TGGCACCGGAACTGACCCCCGTCTACCGCCACATCCTCTACCGCTATCGC
GTGCGCTATCCGAAGACCAGTTTCGGGAATCCCTACTATCCGATCAACAA
CGAAGGGGGCAACCAACATAGCCGTGTCCACCACGGCTATCCAGGCCTGA
ACTCCGGCGTGGTCCTGCTGCTCCTAAACCGCATCCGTAACTCAAAGTCC
TACCTGGAGAAGCTGACCCACTCGGAGGTGCACACCCTGGTCGCCAAGTA
CTCCTTCAAGGGCCACCTCGGCGACCAGGACTTCTTCACCCTGCTGGGAT
ACGAGTACCCGAACTTAATCTACAGACTGGACTGCATTTGGAACCGCCAG
CTGTGCACCTGGTGGAAGGATCACGGATACTCACAGATATTCGACGCTTA
TTTCCGGTGCGAGGGCAATATTAAAATGTACCATGGCAACTGTAATACGC
GAATTCCAGAATAAATAAAATTGTTATAGGAATATTAAATTAATTAAAAA
AAAAAAAAAAAAAAA

FI19481.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:24:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19908512..19910056 1..1545 7575 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:24:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24022437..24023984 1..1548 7740 100 Plus
Blast to na_te.dros performed 2019-03-15 12:24:40
Subject Length Description Subject Range Query Range Score Percent Strand
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 6126..6169 1502..1545 121 75 Plus

FI19481.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:25:35 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19908512..19910056 1..1545 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-01-13 12:27:36 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
CG11388-RA 1..1377 138..1514 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:06 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
CG11388-RA 1..1377 138..1514 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 19:58:27 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
CG11388-RA 1..1377 138..1514 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-01-13 12:27:35 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
CG11388-RA 65..1609 1..1545 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:06 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
CG11388-RA 95..1639 1..1545 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 19:58:27 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
CG11388-RA 95..1639 1..1545 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:35 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24022437..24023981 1..1545 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:35 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24022437..24023981 1..1545 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:25:35 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24022437..24023981 1..1545 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:06 Download gff for FI19481.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19909960..19911504 1..1545 100   Plus

FI19481.hyp Sequence

Translation from 137 to 1513

> FI19481.hyp
MAKNSFKTLISQKHKTFPADLNMYGMKCKSQLLEDQENVTLIINRRNSIR
QKPKSWAWTLLRCRWQKKLVLLLIFICVCVLIVFANTHLLVRGNILSAFL
SSRLNKHSHAEKQEARYPDIPATTPSVPPVLRPTHYLLNYSSTQLELSSH
LNGLSSDYNIFVIYTRENYHLNLKFDLFAHSLLKHTSAQLHLHVITDSES
QPSVLEILQRQIRRFRRTVIYTIYDVKVCSSIIQDIAAKLSPYFSSTPNS
YYSDSLFFLSLGLHRIADRSLNRAILLDCDIVFRSDVRLLFNEFDNFLPH
QLYGLAPELTPVYRHILYRYRVRYPKTSFGNPYYPINNEGGNQHSRVHHG
YPGLNSGVVLLLLNRIRNSKSYLEKLTHSEVHTLVAKYSFKGHLGDQDFF
TLLGYEYPNLIYRLDCIWNRQLCTWWKDHGYSQIFDAYFRCEGNIKMYHG
NCNTRIPE*

FI19481.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG11388-PA 458 CG11388-PA 1..458 1..458 2443 100 Plus

FI19481.pep Sequence

Translation from 137 to 1513

> FI19481.pep
MAKNSFKTLISQKHKTFPADLNMYGMKCKSQLLEDQENVTLIINRRNSIR
QKPKSWAWTLLRCRWQKKLVLLLIFICVCVLIVFANTHLLVRGNILSAFL
SSRLNKHSHAEKQEARYPDIPATTPSVPPVLRPTHYLLNYSSTQLELSSH
LNGLSSDYNIFVIYTRENYHLNLKFDLFAHSLLKHTSAQLHLHVITDSES
QPSVLEILQRQIRRFRRTVIYTIYDVKVCSSIIQDIAAKLSPYFSSTPNS
YYSDSLFFLSLGLHRIADRSLNRAILLDCDIVFRSDVRLLFNEFDNFLPH
QLYGLAPELTPVYRHILYRYRVRYPKTSFGNPYYPINNEGGNQHSRVHHG
YPGLNSGVVLLLLNRIRNSKSYLEKLTHSEVHTLVAKYSFKGHLGDQDFF
TLLGYEYPNLIYRLDCIWNRQLCTWWKDHGYSQIFDAYFRCEGNIKMYHG
NCNTRIPE*

FI19481.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:33:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12890-PA 457 GF12890-PA 1..457 1..458 2283 92.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22921-PA 458 GG22921-PA 1..458 1..458 2412 98 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21705-PA 463 GH21705-PA 1..462 1..458 1640 66.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11388-PA 458 CG11388-PA 1..458 1..458 2443 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20695-PA 463 GI20695-PA 9..463 10..458 1538 63.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11650-PA 459 GL11650-PA 1..459 1..458 2102 87.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10968-PA 459 GA10968-PA 1..459 1..458 2116 88 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16083-PA 417 GM16083-PA 1..417 1..458 2145 89.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11824-PA 978 GD11824-PA 786..978 266..458 1082 100 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21934-PA 429 GK21934-PA 1..429 1..458 1697 72.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14358-PA 458 GE14358-PA 1..458 1..458 2403 97.6 Plus