Clone FI19482 Report

Search the DGRC for FI19482

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:194
Well:82
Vector:pOT2
Associated Gene/TranscriptCG10202-RA
Protein status:FI19482.pep: gold
Sequenced Size:2029

Clone Sequence Records

FI19482.complete Sequence

2029 bp assembled on 2012-03-05

GenBank Submission: BT133293.1

> FI19482.complete
CACAAATCTTGGCCAGAATATGTCTATCTCAGTGAAGCGGAAAACGGTGA
TTTCACCGCAGGAACTCCTGAAGACACTCGAGCTGTCCGGCGAAGAGGAC
CTCGATCTGCAGATCAAGAACTGGGTGATGTGGGACCGCAACGAGGCGAC
GCTCCAGCAGGTGACTGAGGCAGTCAGGGATCAGGATTGGAAGGCGTTGC
GGGTGAGACTGTGCCATAGGATCACCTATTTGACAACTGGCTTGAGGGGA
GTGATGCGCGCAGGCTTCGACTCTTTGAACGATGTGGTGATCATCGAAGT
GGCCCAGGGCATCTGCGCCTACCTCGTCGATGCCTATCCAAGCATCCAGA
AGAGGCAAACACAGGGCGTGGTCGTTGGCTACGATGGCAGGTACAATAGC
AAGCGGTTTGCCCAACTCATCGCCACCGTGTTCCTGAACAACGACTTCAA
GGTGTTCCTCTTCACTCGGATGATTCCGACACCCTTTATACCCTTCACCG
TCGTCACGCTCCAGTGCCTGGCGGGGATCGTGGTCACTGCCTCCCACAAC
GTTAAGGAGGACAATGGCATCAAGGTATATTGGTCGAATGGGGCTCAGGC
GATGGCACCGCACGATCAGCGGATTCATGACTATATGATGAATAACCTAG
AACCAAAGCCTTCGTCCTGGGAAACTTCACTGGTACTTGACCATCCCTTG
GTGGAGGATCCCTATCGTCAGATATACCCACTCTTTTACGAGGCTCTCAA
GACGCTTATTCCCCCAATTTACCTGGAAACTAATGAGTGCAGCCAGTTGA
GGTTCATCTATACAGCTCTTCACGGTGTGGGTTATCCCTTCATGAGGGAG
GCCTTCTACCAGGCGCGACTCAAGCCGGTTATTCCCGTCGTGGAACAGAA
AGAGGCCGATCCAGAGTTTCCCACCCTCGTTAAACCAAATCCGGAAGAGG
GCAAGGAAGCGCTGAAGCTGGCCATAAAGAAGGCGGATGCGGAACACTGC
ACCTTGGTTCTGGCCAATGATCCGGATGTGGATCGCTTGGCTGTGGCAGA
GCTGGATCCGCGTGGCCGCTGGAAGCTGTTCAATGGCAACGAACTGGGTG
CCCTGCTCGGCTGGTGGGCACTGGAGAACTACAAGACTAGGACACCCAAG
CCAGCAGTGACCAATTGCATAATGATAGCCACACTGGTCAGCTCACGCAT
CCTGGCGGCAATGGCGAGAGTTGAGGGCTTCATCTTTGTGGAGGGCATGC
CCAGTTTCCCCTGGATGGCACATCGCGCCTTGGAGCTGGAAAAGTCTGGA
AGAACAGTACTATTTGCATTTGAGGAGTGCTTTGGCTATATGTTCGGAAT
GAGCCTGCCGGATAAGGATGGCATTGGAGCTGCCATGCAGTTGGCCAGCA
TGGCCTGTTATCTGCGCAGCACTAGAAATGTGACGCTGATCGAGAAGCTA
AGGGAGATCTACGATACGTATGGCTACCATTCGTCGATCTCGTCGGTTTA
TATGGCCGATAGTCCAGAGACAATCACTAGCGTCTTCGATCATTTGCGCA
ACTTTACGGACGAAGAGGGATATCCGAAGTTCATTCTGGATGAAGAATTC
GAAGTGGTTCATATCCGGGATTTGACCATCGGACTGGACACTTCCTTCAG
CGATGGAAAGGCTCGTATGCCGGTCACTCCAGATGCCCAGCTAATTACGT
TTACCTTCACCAATGGCTATGTGGTTACCCTGCGATCGGCACCCAACGAT
ATTAAGATCAAACTTAATGCGGAGATCTGTGGCTTGCCGGAGGAAAAGCA
GTGGGAGGAGCTACACGATAAACTGAACAGGATGACCAATGCCGTGGTGG
AGGAGTTTCTTCAACCAGAGGAGAATGGTCTTACGGATGCCTCAACAATT
CAATAATCTTGGTTTTCAATTCAAAACGTTCGATAACATTCATTTTTATG
AGCTGTAACTAATGGCAAGTTTTTAAAAGCATGTTAATAAAATCATAAGA
GACGTTAAAAAAAAAAAAAAAAAAAAAAA

FI19482.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:57:27
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 10705172..10706232 2006..946 5155 99.1 Minus
chr2R 21145070 chr2R 10706303..10707249 947..1 4675 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:57:25
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14817855..14818917 2008..946 5315 100 Minus
2R 25286936 2R 14818988..14819934 947..1 4720 99.9 Minus
Blast to na_te.dros performed on 2019-03-15 12:57:26 has no hits.

FI19482.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:58:22 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 10705172..10706230 948..2006 99 <- Minus
chr2R 10706303..10707249 1..947 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-05 15:54:21 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
CG10202-RA 1..1887 20..1906 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:54:18 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
CG10202-RA 1..1887 20..1906 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:17:14 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
CG10202-RA 1..1887 20..1906 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-05 15:54:21 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
CG10202-RA 54..2056 1..2003 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:54:18 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
CG10202-RA 54..2059 1..2006 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:17:14 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
CG10202-RA 54..2059 1..2006 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:58:22 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14817857..14818915 948..2006 100 <- Minus
2R 14818988..14819934 1..947 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:58:22 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14817857..14818915 948..2006 100 <- Minus
2R 14818988..14819934 1..947 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:58:22 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14817857..14818915 948..2006 100 <- Minus
2R 14818988..14819934 1..947 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:54:18 Download gff for FI19482.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10705362..10706420 948..2006 100 <- Minus
arm_2R 10706493..10707439 1..947 99   Minus

FI19482.hyp Sequence

Translation from 0 to 1905

> FI19482.hyp
TNLGQNMSISVKRKTVISPQELLKTLELSGEEDLDLQIKNWVMWDRNEAT
LQQVTEAVRDQDWKALRVRLCHRITYLTTGLRGVMRAGFDSLNDVVIIEV
AQGICAYLVDAYPSIQKRQTQGVVVGYDGRYNSKRFAQLIATVFLNNDFK
VFLFTRMIPTPFIPFTVVTLQCLAGIVVTASHNVKEDNGIKVYWSNGAQA
MAPHDQRIHDYMMNNLEPKPSSWETSLVLDHPLVEDPYRQIYPLFYEALK
TLIPPIYLETNECSQLRFIYTALHGVGYPFMREAFYQARLKPVIPVVEQK
EADPEFPTLVKPNPEEGKEALKLAIKKADAEHCTLVLANDPDVDRLAVAE
LDPRGRWKLFNGNELGALLGWWALENYKTRTPKPAVTNCIMIATLVSSRI
LAAMARVEGFIFVEGMPSFPWMAHRALELEKSGRTVLFAFEECFGYMFGM
SLPDKDGIGAAMQLASMACYLRSTRNVTLIEKLREIYDTYGYHSSISSVY
MADSPETITSVFDHLRNFTDEEGYPKFILDEEFEVVHIRDLTIGLDTSFS
DGKARMPVTPDAQLITFTFTNGYVVTLRSAPNDIKIKLNAEICGLPEEKQ
WEELHDKLNRMTNAVVEEFLQPEENGLTDASTIQ*

FI19482.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG10202-PA 628 CG10202-PA 1..628 7..634 3284 100 Plus
Pmm45A-PA 623 CG8073-PA 12..618 23..627 1723 52.7 Plus

FI19482.pep Sequence

Translation from 1 to 1905

> FI19482.pep
TNLGQNMSISVKRKTVISPQELLKTLELSGEEDLDLQIKNWVMWDRNEAT
LQQVTEAVRDQDWKALRVRLCHRITYLTTGLRGVMRAGFDSLNDVVIIEV
AQGICAYLVDAYPSIQKRQTQGVVVGYDGRYNSKRFAQLIATVFLNNDFK
VFLFTRMIPTPFIPFTVVTLQCLAGIVVTASHNVKEDNGIKVYWSNGAQA
MAPHDQRIHDYMMNNLEPKPSSWETSLVLDHPLVEDPYRQIYPLFYEALK
TLIPPIYLETNECSQLRFIYTALHGVGYPFMREAFYQARLKPVIPVVEQK
EADPEFPTLVKPNPEEGKEALKLAIKKADAEHCTLVLANDPDVDRLAVAE
LDPRGRWKLFNGNELGALLGWWALENYKTRTPKPAVTNCIMIATLVSSRI
LAAMARVEGFIFVEGMPSFPWMAHRALELEKSGRTVLFAFEECFGYMFGM
SLPDKDGIGAAMQLASMACYLRSTRNVTLIEKLREIYDTYGYHSSISSVY
MADSPETITSVFDHLRNFTDEEGYPKFILDEEFEVVHIRDLTIGLDTSFS
DGKARMPVTPDAQLITFTFTNGYVVTLRSAPNDIKIKLNAEICGLPEEKQ
WEELHDKLNRMTNAVVEEFLQPEENGLTDASTIQ*

FI19482.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11777-PA 630 GF11777-PA 1..624 7..630 2663 74.8 Plus
Dana\GF12709-PA 623 GF12709-PA 12..618 23..627 1682 51.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:56:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22396-PA 628 GG22396-PA 1..628 7..634 3209 93 Plus
Dere\GG10583-PA 584 GG10583-PA 12..579 23..627 1624 49.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:56:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20478-PA 618 GH20478-PA 5..612 14..620 2101 61.4 Plus
Dgri\GH22267-PA 607 GH22267-PA 5..601 14..620 2081 61.2 Plus
Dgri\GH19656-PA 585 GH19656-PA 1..579 43..620 2010 61.4 Plus
Dgri\GH23045-PA 623 GH23045-PA 12..618 23..627 1786 52.6 Plus
Dgri\GH21282-PA 580 GH21282-PA 8..563 28..577 1572 51.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:03
Subject Length Description Subject Range Query Range Score Percent Strand
Pgm2b-PA 628 CG10202-PA 1..628 7..634 3284 100 Plus
Pgm2a-PA 623 CG8073-PA 12..618 23..627 1723 52.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21021-PA 616 GI21021-PA 12..615 21..622 2100 61.1 Plus
Dmoj\GI21114-PA 623 GI21114-PA 12..617 23..627 1718 50.7 Plus
Dmoj\GI19724-PA 625 GI19724-PA 13..625 29..633 1510 47.8 Plus
Dmoj\GI21115-PA 590 GI21115-PA 16..572 66..627 1394 47.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:56:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10655-PA 629 GL10655-PA 4..624 13..631 2398 68.9 Plus
Dper\GL16851-PA 584 GL16851-PA 12..568 23..577 1721 54 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:56:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10151-PA 629 GA10151-PA 4..624 13..631 2386 68.8 Plus
Dpse\GA20805-PB 623 GA20805-PB 12..618 23..627 1857 53.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20181-PA 628 GM20181-PA 1..628 7..634 3335 97.9 Plus
Dsec\GM20631-PA 584 GM20631-PA 12..579 23..627 1637 49.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:56:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25655-PA 598 GD25655-PA 1..598 7..634 3129 93.2 Plus
Dsim\GD10104-PA 584 GD10104-PA 12..579 23..627 1637 49.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:56:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21944-PA 621 GJ21944-PA 12..620 21..627 2225 64.9 Plus
Dvir\GJ20963-PA 624 GJ20963-PA 12..618 23..627 1817 53.5 Plus
Dvir\GJ20964-PA 686 GJ20964-PA 81..681 29..628 1780 53.8 Plus
Dvir\GJ17598-PA 583 GJ17598-PA 8..562 23..572 1527 51.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:56:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23293-PA 633 GK23293-PA 15..631 18..632 2287 65.2 Plus
Dwil\GK22961-PA 623 GK22961-PA 12..618 23..627 1869 55 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:56:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12285-PA 628 GE12285-PA 1..628 7..634 3231 93.3 Plus
Dyak\GE22565-PA 584 GE22565-PA 12..579 23..627 1635 49.6 Plus