Clone FI19525 Report

Search the DGRC for FI19525

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:195
Well:25
Vector:pFlc-1
Associated Gene/TranscriptCG14830-RA
Protein status:FI19525.pep: gold
Sequenced Size:1791

Clone Sequence Records

FI19525.complete Sequence

1791 bp assembled on 2012-02-16

GenBank Submission: BT133242.1

> FI19525.complete
AGTTTGAGCCGTGATCGCAACGCGTTCGCTTCGATTTTTCCCACCGGACC
ACGGTGCATTTTGCAATCTCCGCGATTGCCAAACAAACAAAACAAAGTTT
TACTCCAACGAAAAAAAAAAAAAAAAAATCTGAGATAAATAACGCGCAGC
AAAAGCAACTATTTTTAGCGGATTACCAGCAGCCAAGTGAAGTGTAATGA
AATGTGTACAGCGGCCAAAAACTAACAACCTGTCGCATTGGCTGGCAAAA
AGCGTTAACAATAAATAAGCGAAACAATACCAACAGCACGGCCAGTTCAA
CTGTATAACAATGAGGAGAGAAGGCACCTCGAGGAATTGCTAGACGGGTC
CATTAGCAGTCAATCAGCCGCAGAGAAGAGCCAGCAAAAGATACAGATAC
AGGCGGAGCAAAAGATACAGGATGCACGAGAGACAAGTGAAGAAGTTGAA
GGGCAGCCATTATGTGGCCACGCACGGTCGCCTCACTCCGGATCCGCCCT
ACGTCCACTCGAACCGCGGCTATTCCACCGACGGCGATGAGACCCACTCC
CACCGGGCGCCCTCGGAGCGCACCTATTCGGAGTACACGTTGACCCACGA
GCGCATCTCGCCGCAGTACAATGGTTCGCGCAAGAAGCGCTCCTCATCCT
CGAATGGAAACCATCAGCATCAGCACCTGCAGAGCAGCTACAGCCACAGT
CAGATGGGCCTCTCCAGTTCGCCGGACAACGGAGGACCTCGCTCCCTCAG
CGGACCGCCGCCCACGCGCCAGCCACCGCGTGCTCCGTCCGCCCTGAGCT
ATGACCAGGCTGGTGACGCCGGCAGCGACATATATGTGACCAGTGCCGCC
TACAAGGCGCCCTCCGAGATCAGTCGCTACAGTCAGCGTCCAGTGTCGCG
AGGAGCTCCACGGAGTGTTTACTCCGTGGCCAGTACGGCCAAAACCGGAC
GCAGTGCGCGCTCGACGACTCGGCGAGGCGCCAAAGTGGAAACCATGTCC
GCGCCGAATCCATTTTGCCCCAATGTCAAGGGCGTGTGCTGTCTGATGCT
GTTGCTCAACTTGGGCCTGATCCTGGTGACGCTAGGATTCGTCATTGTGG
TGCAGTTCTATGAGCCACTGTACGTGTGGATACTGGGAATTGTGTTCCTG
GTCTTCGGCTTCCTCACGCTAATCGGCTGCATGATCTACTGTGTGTACGT
GTTCCGGGATGCGAAGACGCCATCGCAGGTGCGCAACGAGGATCTCTACT
GGACGCGGCACTGGCAGAAGAATATCGGATACACGCCGCAGGAGATCAAC
TACAAGGCGGACAAGTACGATGCCTACTCGGATCGCTATTCGGTTAGCAA
GCTGAGTGGCAAATACTCGGATCGCGAGAGCCAGCGATACTGATTGTTAT
GCATATGTACATATGTATGTATGTACATACATATGCGGTTTGATGAAAGG
GGATCCTTTGGGCGGAGAAGAAATATGAATAGCCACATATAAACCACTTA
TATCTTAACTAATTGTAAGACTATCTACTAGTTCTAAACGGTTATTAACA
AGGCCCCTCCAACGTACCTGCTGCAAGTTGCTTGCTGGTTTGTATGTTTT
AAGAGTGAAACTGACGGGAGACGCGAACGCGAGGATGCAACAGAGTATTG
TAATCTGCCATATTTGAGAAGGTTTGTTAGGTTTGATTTGGCTAATCAAC
AGAAGAGTTTTATGCTAAAATTGTAACTGCAATTGTAACACACGAGAAAT
AAACAAGCAAATAATACCTACTAGAAAAAAAAAAAAAAAAA

FI19525.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:18:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 7242863..7243766 1774..871 4430 99.3 Minus
chr3L 24539361 chr3L 7243825..7244253 873..445 2115 99.5 Minus
chr3L 24539361 chr3L 7255899..7256073 176..1 815 98.9 Minus
chr3L 24539361 chr3L 7255101..7255248 324..177 740 100 Minus
chr3L 24539361 chr3L 7244319..7244443 446..322 625 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 7250717..7251621 1775..871 4525 100 Minus
3L 28110227 3L 7251680..7252108 873..445 2130 99.8 Minus
3L 28110227 3L 7263743..7263917 176..1 830 99.4 Minus
3L 28110227 3L 7262948..7263095 324..177 740 100 Minus
3L 28110227 3L 7252174..7252298 446..322 625 100 Minus
Blast to na_te.dros performed 2019-03-15 13:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 682..705 1403..1426 120 100 Plus
diver2 4917 diver2 DIVER2 4917bp 537..638 1433..1338 117 64.4 Minus
Dbuz\INE-1 1467 Dbuz\INE-1 ISBU1 1467bp 456..487 1433..1402 115 84.4 Minus

FI19525.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:20:08 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 7242863..7243763 874..1774 99 <- Minus
chr3L 7243825..7244253 445..873 99 <- Minus
chr3L 7244321..7244441 324..444 100 <- Minus
chr3L 7255102..7255248 177..323 100 <- Minus
chr3L 7255899..7256073 1..176 98   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-16 15:26:06 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14830-RA 1..972 422..1393 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:10:34 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14830-RA 1..972 422..1393 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:27:30 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14830-RA 1..972 422..1393 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-16 15:26:06 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14830-RA 1..1773 1..1774 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:10:34 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14830-RA 4..1776 1..1774 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:27:30 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14830-RA 4..1776 1..1774 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:08 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7250718..7251618 874..1774 100 <- Minus
3L 7251680..7252108 445..873 99 <- Minus
3L 7252176..7252296 324..444 100 <- Minus
3L 7262949..7263095 177..323 100 <- Minus
3L 7263743..7263917 1..176 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:08 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7250718..7251618 874..1774 100 <- Minus
3L 7251680..7252108 445..873 99 <- Minus
3L 7252176..7252296 324..444 100 <- Minus
3L 7262949..7263095 177..323 100 <- Minus
3L 7263743..7263917 1..176 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:20:08 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
3L 7250718..7251618 874..1774 100 <- Minus
3L 7251680..7252108 445..873 99 <- Minus
3L 7252176..7252296 324..444 100 <- Minus
3L 7262949..7263095 177..323 100 <- Minus
3L 7263743..7263917 1..176 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:10:34 Download gff for FI19525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 7243818..7244718 874..1774 100 <- Minus
arm_3L 7244780..7245208 445..873 99 <- Minus
arm_3L 7245276..7245396 324..444 100 <- Minus
arm_3L 7256049..7256195 177..323 100 <- Minus
arm_3L 7256843..7257017 1..176 99   Minus

FI19525.hyp Sequence

Translation from 421 to 1392

> FI19525.hyp
MHERQVKKLKGSHYVATHGRLTPDPPYVHSNRGYSTDGDETHSHRAPSER
TYSEYTLTHERISPQYNGSRKKRSSSSNGNHQHQHLQSSYSHSQMGLSSS
PDNGGPRSLSGPPPTRQPPRAPSALSYDQAGDAGSDIYVTSAAYKAPSEI
SRYSQRPVSRGAPRSVYSVASTAKTGRSARSTTRRGAKVETMSAPNPFCP
NVKGVCCLMLLLNLGLILVTLGFVIVVQFYEPLYVWILGIVFLVFGFLTL
IGCMIYCVYVFRDAKTPSQVRNEDLYWTRHWQKNIGYTPQEINYKADKYD
AYSDRYSVSKLSGKYSDRESQRY*

FI19525.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:54:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14830-PC 323 CG14830-PC 1..323 1..323 1721 100 Plus
CG14830-PB 323 CG14830-PB 1..323 1..323 1721 100 Plus
CG14830-PA 323 CG14830-PA 1..323 1..323 1721 100 Plus

FI19525.pep Sequence

Translation from 421 to 1392

> FI19525.pep
MHERQVKKLKGSHYVATHGRLTPDPPYVHSNRGYSTDGDETHSHRAPSER
TYSEYTLTHERISPQYNGSRKKRSSSSNGNHQHQHLQSSYSHSQMGLSSS
PDNGGPRSLSGPPPTRQPPRAPSALSYDQAGDAGSDIYVTSAAYKAPSEI
SRYSQRPVSRGAPRSVYSVASTAKTGRSARSTTRRGAKVETMSAPNPFCP
NVKGVCCLMLLLNLGLILVTLGFVIVVQFYEPLYVWILGIVFLVFGFLTL
IGCMIYCVYVFRDAKTPSQVRNEDLYWTRHWQKNIGYTPQEINYKADKYD
AYSDRYSVSKLSGKYSDRESQRY*

FI19525.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23864-PA 325 GF23864-PA 1..325 1..323 1657 96 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:31:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14985-PA 324 GG14985-PA 1..324 1..323 1697 98.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15509-PA 330 GH15509-PA 1..330 1..323 1400 86 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG14830-PC 323 CG14830-PC 1..323 1..323 1721 100 Plus
CG14830-PB 323 CG14830-PB 1..323 1..323 1721 100 Plus
CG14830-PA 323 CG14830-PA 1..323 1..323 1721 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:31:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16786-PA 319 GI16786-PA 1..319 1..323 1462 89.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:31:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21193-PA 321 GL21193-PA 1..321 1..323 1533 93.2 Plus
Dper\GL10269-PA 204 GL10269-PA 1..195 1..199 874 87.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13281-PA 321 GA13281-PA 1..321 1..323 1533 93.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:31:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13779-PA 321 GM13779-PA 1..321 1..323 1694 99.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:31:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13078-PA 348 GD13078-PA 1..321 1..323 1671 98.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12528-PA 319 GJ12528-PA 1..319 1..323 1461 89.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:31:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16674-PA 324 GK16674-PA 1..324 1..323 1465 89.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:31:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20431-PA 323 GE20431-PA 1..323 1..323 1697 98.1 Plus