Clone FI19801 Report

Search the DGRC for FI19801

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:198
Well:1
Vector:pOT2
Associated Gene/TranscriptCG8586-RA
Protein status:FI19801.pep: gold
Sequenced Size:1532

Clone Sequence Records

FI19801.complete Sequence

1532 bp assembled on 2012-03-22

GenBank Submission: BT133338.1

> FI19801.complete
AGTCTGTAGCTACGAGATTGTTTCTAATCGGTGTTCTCTTTGCTTTAAAC
TGCACTAGCACATAGTTTCCCACCAACGAAGATGAGCTGGCTGATCTCAG
CGGTGTTCCTCCTGCTGTCCCTTTGTGCCTTCTCGATGGGCCAGGACACG
ATTTCGGCGATGTGCCTCTCGGACGAACGGTGCACGTCTTTGAAGCGTTG
CGAAGACTCGGATGATTCCGGTCGAAGGGGAATTAGGCCACGCAGCTCAC
GCATCTGCGGCACCCAAAGGGTCTGCTGCGAGAAGGCCCAGCTGGACAGC
TATGACAGATGGCTGGTTGAGAGAACCACAACAGTGCCTTCAACAATTCG
AAACAAGGTATCCAGTGTCCTGGAACCGCCGCCGAACGAGAGCTGCGGAC
AGAACATGGAGTGTGTACCCAGAAAGTTGTGCCGCGACAATATTATCAAC
GACTCGGGAATCAGCCTGATCAATCCGAGGATTAGCCCGATTCAGTGCAG
CAAGTCCTTGTACCGCTGTTGCGCCGTAGATCAAAAGGTGGATGACAGCG
AAAGTCCGTACTTGGTGAAGCAGGCGAACTTTAAGTACAAGAACTGCGGC
TACAGCAATCCAAAGGGTCTAATACCCGACAACGACAAGTTCCCCTACTC
GGAGGACGTCTCCATATTCGGAGAGTTTCCTTGGATGGTGGGCATCTTCA
CTGGGCGCCAAGAGTTTCTATGCGGCGGCACTCTCATCCATCCGCGGTTG
GTAGTTACCACTTCGCACAATCTGGTCAACGAGACGGTGGACACCTTGGT
GGCCAGAGCTGGCGACTGGGATCTGAACAGCCTGAACGAGCCGTATCCGC
ACCAGGGCAGCCGTATTAAGGAGATCATCATGCACTCCGAATTCGATCCG
AACTCGTTGTACAACGACATAGCACTATTGCTCCTGGACGAGCCCATCCG
TCTCGCTCCACATATCCAGCCGCTGTGCTTGCCGCCTCCGGAATCTCCGG
AGTTGACCAACCAGCTGCTATCGGTCACCTGTTACGCCACTGGTTGGGGC
ACCAAGGAGGCGGGCAGCGACAAGTTGGAGCATGTGCTCAAGCGGATCAA
CCTGCCACTGGTGGAGCGAGAAGAGTGTCAGGCGAAGCTTCGGAACACAC
GGCTCGAGGCTCGCTTCCGACTGCGACCGAGTTTCATTTGCGCCGGCGGA
GATCCTGGCAAGGACACCTGCAAGGGCGACGGCGGCTCACCGCTTTTCTG
CCAAATGCCTGGCGAAATGGATCGGTACCAGCTGGTGGGCATCGTGTCCT
GGGGCGTCGAGTGCGCCGTGGAAGACATTCCGGCGGTGTACGTCAACGTG
CCCCATCTGCGCGGCTGGATTGACGAGAAGATCAGAGGACTTGGAATCGT
GCTGCAGGCGCAATAAGCTTAAACCTTAATCCACGATGCAAATGAAAAAT
GAGAAGCAAAGGTCGTTTTTTAATTTCAAAAATTAACCAAATAAAATATA
ACGTTTAGATAGAAAAAAAAAAAAAAAAAAAA

FI19801.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:09:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 4581318..4582294 1512..536 4870 99.9 Minus
chr2R 21145070 chr2R 4582357..4582832 539..64 2380 100 Minus
chr2R 21145070 chr2R 4583294..4583358 65..1 325 100 Minus
chr2R 21145070 chr2R 4585862..4586003 1177..1318 290 80.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8693738..8694715 1513..536 4875 99.9 Minus
2R 25286936 2R 8694778..8695253 539..64 2380 100 Minus
2R 25286936 2R 8695715..8695779 65..1 325 100 Minus
2R 25286936 2R 8698283..8698424 1177..1318 290 80.3 Plus
Blast to na_te.dros performed on 2019-03-15 13:09:02 has no hits.

FI19801.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:09:42 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 4581318..4582292 538..1512 99 <- Minus
chr2R 4582359..4582830 66..537 100 <- Minus
chr2R 4583294..4583358 1..65 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-22 16:36:24 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
CG8586-RA 1..1335 82..1416 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:19 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
CG8586-RA 1..1335 82..1416 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:23:02 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
CG8586-RA 1..1335 82..1416 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-22 16:36:24 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
CG8586-RA 18..1529 1..1512 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:19 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
CG8586-RA 19..1530 1..1512 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:23:02 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
CG8586-RA 19..1530 1..1512 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:42 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8693739..8694713 538..1512 99 <- Minus
2R 8694780..8695251 66..537 100 <- Minus
2R 8695715..8695779 1..65 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:42 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8693739..8694713 538..1512 99 <- Minus
2R 8694780..8695251 66..537 100 <- Minus
2R 8695715..8695779 1..65 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:42 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8693739..8694713 538..1512 99 <- Minus
2R 8694780..8695251 66..537 100 <- Minus
2R 8695715..8695779 1..65 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:19 Download gff for FI19801.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4581244..4582218 538..1512 99 <- Minus
arm_2R 4582285..4582756 66..537 100 <- Minus
arm_2R 4583220..4583284 1..65 100   Minus

FI19801.pep Sequence

Translation from 81 to 1415

> FI19801.pep
MSWLISAVFLLLSLCAFSMGQDTISAMCLSDERCTSLKRCEDSDDSGRRG
IRPRSSRICGTQRVCCEKAQLDSYDRWLVERTTTVPSTIRNKVSSVLEPP
PNESCGQNMECVPRKLCRDNIINDSGISLINPRISPIQCSKSLYRCCAVD
QKVDDSESPYLVKQANFKYKNCGYSNPKGLIPDNDKFPYSEDVSIFGEFP
WMVGIFTGRQEFLCGGTLIHPRLVVTTSHNLVNETVDTLVARAGDWDLNS
LNEPYPHQGSRIKEIIMHSEFDPNSLYNDIALLLLDEPIRLAPHIQPLCL
PPPESPELTNQLLSVTCYATGWGTKEAGSDKLEHVLKRINLPLVEREECQ
AKLRNTRLEARFRLRPSFICAGGDPGKDTCKGDGGSPLFCQMPGEMDRYQ
LVGIVSWGVECAVEDIPAVYVNVPHLRGWIDEKIRGLGIVLQAQ*

FI19801.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:06:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12570-PA 448 GF12570-PA 2..446 1..442 1690 69 Plus
Dana\GF12376-PA 457 GF12376-PA 24..457 25..442 1082 49.1 Plus
Dana\GF14116-PA 400 GF14116-PA 42..371 79..412 654 41.2 Plus
Dana\GF13091-PA 347 GF13091-PA 90..334 172..435 521 39 Plus
Dana\GF11134-PA 345 GF11134-PA 33..340 111..432 507 35 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10625-PA 437 GG10625-PA 1..437 1..444 2110 89 Plus
Dere\GG23377-PA 447 GG23377-PA 7..443 10..441 1043 47.6 Plus
Dere\GG23951-PA 413 GG23951-PA 76..402 103..435 666 41.1 Plus
Dere\GG24481-PA 341 GG24481-PA 22..324 105..434 515 34.8 Plus
Dere\GG17425-PA 405 GG17425-PA 80..403 85..434 475 31.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21359-PA 458 GH21359-PA 12..456 3..443 1352 56.1 Plus
Dgri\GH20539-PA 450 GH20539-PA 4..440 1..433 998 46.4 Plus
Dgri\GH13850-PA 400 GH13850-PA 62..388 103..434 714 43.9 Plus
Dgri\GH10384-PA 371 GH10384-PA 28..354 103..435 647 39.1 Plus
Dgri\GH21265-PA 363 GH21265-PA 27..356 100..439 579 37.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG8586-PC 444 CG8586-PC 1..444 1..444 2389 100 Plus
CG8586-PB 444 CG8586-PB 1..444 1..444 2389 100 Plus
CG8586-PA 444 CG8586-PA 1..444 1..444 2389 100 Plus
CG8738-PA 459 CG8738-PA 7..455 10..441 1046 45.4 Plus
CG5390-PB 406 CG5390-PB 69..395 103..435 667 40.5 Plus
CG5390-PA 406 CG5390-PA 69..395 103..435 667 40.5 Plus
CG40160-PH 421 CG40160-PH 52..409 93..434 559 34.9 Plus
CG40160-PG 421 CG40160-PG 52..409 93..434 559 34.9 Plus
CG40160-PF 421 CG40160-PF 52..409 93..434 559 34.9 Plus
CG40160-PE 421 CG40160-PE 52..409 93..434 559 34.9 Plus
CG40160-PD 421 CG40160-PD 52..409 93..434 559 34.9 Plus
CG40160-PA 421 CG40160-PA 52..409 93..434 559 34.9 Plus
CG14990-PA 322 CG14990-PA 48..299 172..432 500 39.8 Plus
CG18557-PA 343 CG18557-PA 22..324 105..434 497 35.2 Plus
SPH93-PA 494 CG6639-PA 232..486 171..434 496 40.6 Plus
CG4998-PB 1185 CG4998-PB 850..1179 99..432 494 31.5 Plus
CG4793-PD 910 CG4793-PD 21..340 105..435 493 36.8 Plus
CG31780-PB 464 CG31780-PB 30..344 102..430 490 34.2 Plus
CG18477-PA 464 CG18477-PA 30..344 102..430 490 34.2 Plus
CG4998-PA 891 CG4998-PA 623..885 168..432 490 36.2 Plus
CG31827-PA 294 CG31827-PA 31..285 172..435 467 35.6 Plus
CG18478-PA 294 CG18478-PA 31..285 172..435 467 35.6 Plus
CG13318-PA 405 CG13318-PA 80..399 85..430 454 32.3 Plus
CG9377-PA 355 CG9377-PA 25..344 105..435 440 31.5 Plus
CG3117-PB 347 CG3117-PB 24..329 105..431 421 30.9 Plus
CG8172-PD 371 CG8172-PD 86..364 139..432 391 31.2 Plus
CG18563-PB 379 CG18563-PB 143..379 197..438 368 32.8 Plus
CG8172-PE 545 CG8172-PE 308..538 196..432 367 33.5 Plus
CG8172-PF 561 CG8172-PF 324..554 196..432 367 33.5 Plus
lint-PB 1674 CG8213-PB 1436..1667 194..430 348 34.1 Plus
lint-PC 1693 CG8213-PC 1455..1686 194..430 348 34.1 Plus
Corin-PC 1397 CG2105-PC 1113..1347 197..434 347 34.8 Plus
Corin-PB 1397 CG2105-PB 1113..1347 197..434 347 34.8 Plus
l(2)k05911-PC 639 CG31728-PC 387..639 172..435 344 34.3 Plus
Np-PB 1041 CG34350-PB 806..1037 196..432 340 30.7 Plus
Np-PA 1041 CG34350-PA 806..1037 196..432 340 30.7 Plus
Sb-PB 787 CG4316-PB 552..787 196..435 336 30.4 Plus
Sb-PA 787 CG4316-PA 552..787 196..435 336 30.4 Plus
mas-PC 1046 CG15002-PC 811..1041 197..434 335 35.3 Plus
mas-PB 1047 CG15002-PB 812..1042 197..434 335 35.3 Plus
CG8170-PB 778 CG8170-PB 486..768 134..430 325 30.3 Plus
CG9372-PA 408 CG9372-PA 124..402 141..430 323 27.9 Plus
CG8170-PA 855 CG8170-PA 620..845 196..430 311 32.8 Plus
CG8172-PG 192 CG8172-PG 4..185 242..432 305 34.7 Plus
CG7432-PB 721 CG7432-PB 484..720 197..435 304 31.9 Plus
CG18735-PA 364 CG18735-PA 93..316 198..435 301 30.8 Plus
CG32260-PC 395 CG32260-PC 157..392 197..434 300 35.2 Plus
CG32260-PA 575 CG32260-PA 337..572 197..434 300 35.2 Plus
CG3355-PA 314 CG3355-PA 86..302 198..430 297 32.4 Plus
CG11836-PI 281 CG11836-PI 7..274 173..434 288 30.4 Plus
CG11836-PJ 333 CG11836-PJ 59..326 173..434 288 30.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:06:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20774-PA 454 GI20774-PA 28..448 25..439 1341 58 Plus
Dmoj\GI18807-PA 438 GI18807-PA 21..436 26..442 1012 46.6 Plus
Dmoj\GI19467-PA 398 GI19467-PA 64..386 103..434 691 42.5 Plus
Dmoj\GI24370-PA 420 GI24370-PA 78..413 108..439 587 37.5 Plus
Dmoj\GI23068-PA 387 GI23068-PA 44..385 74..434 488 30.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17367-PA 465 GL17367-PA 19..464 8..443 1650 67.5 Plus
Dper\GL17115-PA 454 GL17115-PA 25..450 28..441 971 45.5 Plus
Dper\GL18967-PA 402 GL18967-PA 64..391 103..435 725 42.8 Plus
Dper\GL26716-PA 298 GL26716-PA 15..291 146..435 608 38.9 Plus
Dper\GL15455-PA 294 GL15455-PA 15..290 146..434 605 39.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21182-PA 465 GA21182-PA 19..464 8..443 1658 68.2 Plus
Dpse\GA21292-PA 462 GA21292-PA 25..458 28..441 970 45.1 Plus
Dpse\GA29037-PA 335 GA29037-PA 22..331 101..434 612 36.8 Plus
Dpse\GA29220-PA 290 GA29220-PA 15..290 146..434 599 39.4 Plus
Dpse\GA29036-PA 484 GA29036-PA 23..347 103..434 547 36.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20670-PA 444 GM20670-PA 1..444 1..444 2333 98.2 Plus
Dsec\GM21057-PA 459 GM21057-PA 26..453 28..439 990 44.8 Plus
Dsec\GM11791-PA 405 GM11791-PA 68..394 103..435 692 42.3 Plus
Dsec\GM25277-PA 421 GM25277-PA 37..418 78..441 581 34.5 Plus
Dsec\GM16118-PA 457 GM16118-PA 25..338 103..430 500 34.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10144-PA 444 GD10144-PA 1..444 1..444 2312 97.3 Plus
Dsim\GD15270-PA 429 GD15270-PA 1..412 1..412 2147 97.3 Plus
Dsim\GD10592-PA 459 GD10592-PA 7..453 10..439 1014 44.4 Plus
Dsim\GD10143-PA 158 GD10143-PA 1..158 1..158 791 94.9 Plus
Dsim\GD22278-PA 405 GD22278-PA 68..394 103..435 689 42.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20509-PA 449 GJ20509-PA 15..447 1..442 1327 57 Plus
Dvir\GJ21834-PA 442 GJ21834-PA 14..441 19..439 1051 45.8 Plus
Dvir\GJ21928-PA 395 GJ21928-PA 36..383 82..434 728 42.7 Plus
Dvir\GJ18039-PA 571 GJ18039-PA 235..564 100..439 589 37.4 Plus
Dvir\GJ18190-PA 289 GJ18190-PA 10..289 162..441 578 41.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21569-PA 454 GK21569-PA 6..452 2..442 1400 57.6 Plus
Dwil\GK21734-PA 470 GK21734-PA 8..467 7..441 963 43.9 Plus
Dwil\GK24265-PA 294 GK24265-PA 20..282 167..434 527 41.2 Plus
Dwil\GK12466-PA 426 GK12466-PA 14..314 56..362 478 36.6 Plus
Dwil\GK11266-PA 405 GK11266-PA 79..403 85..434 460 32.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22829-PA 444 GE22829-PA 1..444 1..444 2160 90.8 Plus
Dyak\GE19219-PA 459 GE19219-PA 26..455 28..441 1034 46.7 Plus
Dyak\GE26141-PA 423 GE26141-PA 86..412 103..435 683 42 Plus
Dyak\GE21411-PA 305 GE21411-PA 38..294 169..434 536 41 Plus
Dyak\GE14999-PA 337 GE14999-PA 22..318 105..434 497 33.9 Plus

FI19801.hyp Sequence

Translation from 81 to 1415

> FI19801.hyp
MSWLISAVFLLLSLCAFSMGQDTISAMCLSDERCTSLKRCEDSDDSGRRG
IRPRSSRICGTQRVCCEKAQLDSYDRWLVERTTTVPSTIRNKVSSVLEPP
PNESCGQNMECVPRKLCRDNIINDSGISLINPRISPIQCSKSLYRCCAVD
QKVDDSESPYLVKQANFKYKNCGYSNPKGLIPDNDKFPYSEDVSIFGEFP
WMVGIFTGRQEFLCGGTLIHPRLVVTTSHNLVNETVDTLVARAGDWDLNS
LNEPYPHQGSRIKEIIMHSEFDPNSLYNDIALLLLDEPIRLAPHIQPLCL
PPPESPELTNQLLSVTCYATGWGTKEAGSDKLEHVLKRINLPLVEREECQ
AKLRNTRLEARFRLRPSFICAGGDPGKDTCKGDGGSPLFCQMPGEMDRYQ
LVGIVSWGVECAVEDIPAVYVNVPHLRGWIDEKIRGLGIVLQAQ*

FI19801.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG8586-PC 444 CG8586-PC 1..444 1..444 2389 100 Plus
CG8586-PB 444 CG8586-PB 1..444 1..444 2389 100 Plus
CG8586-PA 444 CG8586-PA 1..444 1..444 2389 100 Plus
CG8738-PA 459 CG8738-PA 7..455 10..441 1046 45.4 Plus
CG5390-PB 406 CG5390-PB 69..395 103..435 667 40.5 Plus