Clone FI19804 Report

Search the DGRC for FI19804

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:198
Well:4
Vector:pOT2
Associated Gene/TranscriptCG10550-RB
Protein status:FI19804.pep: gold
Sequenced Size:1482

Clone Sequence Records

FI19804.complete Sequence

1482 bp assembled on 2012-04-18

GenBank Submission: BT133478.1

> FI19804.complete
AGAAATCGTCGGACACAAAAGCAGCGTTTTCTCCGAACGGGAATTTAAAT
TGAAAAGTCGCATCAAAATGTCGCCAAACAACAGCGCGGAAAAGCCAGTC
AATCCCAACGAGCACCTGCACATACCGAAGTGGATAAATGAGGAATACTT
CCAGCCGATCATCGAGAAGGATGTGGAAAACTTTGACAAGATCATAAACC
TTGTGCCCATTGCGGCCACTGCGCCCGGCGAGAACTACACATCCATTATG
ATCCGCGTCATTGTGGATATACTGCTGAAGGATGGCAGCGAGCAGAGGGT
ATCGTACATTTTGAAGACAATGCTGGAGGCGGACAGTGGAGCGGATGTGA
TCGATGGCATGGGACTTTTTCCCAAGGAGCGAAAAATGTACGAGGTGCAC
ATCCCGCAGTTCGTAAAGCTTTACAAGGAGGCTGGCCTGGAAATCGAATT
GGCGCCCAAGTGCCTCCATGTCGACGCCACTGACGAATTGATTACCATGG
TTTTCGAGGATCTGAGCCGGCAGAATTTCAAGAACTTCGATCGGCTAAAA
GGGTTCGATCTGCCGCACATGCGAGAAGTGCTCCGGAAACTGGCCGAACT
GCATGCTGCATCCGTGGTGGCCAAGGAAATAAATGGTCCCTACGATGCCA
TGTACAACATGTCCATCTACAACGAGCAGAGTCGGGACCTCTTTGAGTCT
CTGGGTAAGCAGCGAGAGGAGCAATTCCTCAAGGCCATGCGCAACTGGGA
CCTCGAGAATGCCGAAAGCTACATCGCCCGGATGTGGGACCCCTTGGAGG
TGTTCGAGGAAGCAGTGCAAGTCAACCAGGTGGACGAGGACGAGTTCAAT
GTGCTGAACCACGGCGACTGTTGGTCCAACAACATCATGTTCAACTACAA
GGATAACGGCGAGATCGATAGAACCATATTGGTGGACCTGCAGGTTGGCA
AGTGGGGCAGCCCGGCTCAAGACCTTTGGTACCTGATCACAACATCGGCA
TCGCTGGATATCAAGATCAAGGAATTCGATCACTTTATTCAGATCTATCA
CCAGCGTCTGGCGGAATGCCTCAAGCTACTGAACTACTCGAAGCCCATTC
CCACACTCAGGGACCTGCACATTATGATGCTGAAGTATGGATTCTGGGGA
CCTCTGACCGCCATGGGTGTGATGGTGGCCACACTTATGCCCACGGACAA
GGACGCCAATATGAAAATGATTCTGGCCCAAGGACCCGAGGCCGATGCCA
TACGATACAGGACCTTCATCAATCCCTACTATGCCAAAGCAATGAAGGTG
CTTTTACCGTTCTTCGATAACAAGGGACTTTTGAAGTCGAATTAGCTTTA
ATCCCGGATCCCAATTGTGGTGTAGCCAATTTGCTGTGATATTATATATC
ATAGGCGCAAGCAATAAATACGAATTTGATTTAATTTACACGTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI19804.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:48:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21129863..21130731 1149..281 4345 100 Minus
chr3R 27901430 chr3R 21129511..21129804 1441..1148 1455 99.7 Minus
chr3R 27901430 chr3R 21130791..21131012 281..60 1110 100 Minus
chr3R 27901430 chr3R 21131413..21131472 60..1 300 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25306761..25307629 1149..281 4345 100 Minus
3R 32079331 3R 25306405..25306702 1445..1148 1490 100 Minus
3R 32079331 3R 25307689..25307910 281..60 1110 100 Minus
3R 32079331 3R 25308311..25308370 60..1 300 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:48:34 has no hits.

FI19804.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:49:16 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21129509..21129803 1149..1443 99 <- Minus
chr3R 21129864..21130730 282..1148 100 <- Minus
chr3R 21130791..21131011 61..281 100 <- Minus
chr3R 21131413..21131472 1..60 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-18 11:09:47 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
CG10550-RC 1..1278 68..1345 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:13:24 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
CG10550-RB 1..1278 68..1345 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:41:46 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
CG10550-RB 1..1278 68..1345 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 11:09:46 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
CG10550-RB 18..1460 1..1443 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:13:24 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
CG10550-RB 22..1464 1..1443 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:41:46 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
CG10550-RB 22..1464 1..1443 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:49:16 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25306407..25306701 1149..1443 100 <- Minus
3R 25306762..25307628 282..1148 100 <- Minus
3R 25307689..25307909 61..281 100 <- Minus
3R 25308311..25308370 1..60 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:49:16 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25306407..25306701 1149..1443 100 <- Minus
3R 25306762..25307628 282..1148 100 <- Minus
3R 25307689..25307909 61..281 100 <- Minus
3R 25308311..25308370 1..60 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:49:16 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25306407..25306701 1149..1443 100 <- Minus
3R 25306762..25307628 282..1148 100 <- Minus
3R 25307689..25307909 61..281 100 <- Minus
3R 25308311..25308370 1..60 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:13:24 Download gff for FI19804.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21132129..21132423 1149..1443 100 <- Minus
arm_3R 21132484..21133350 282..1148 100 <- Minus
arm_3R 21133411..21133631 61..281 100 <- Minus
arm_3R 21134033..21134092 1..60 100   Minus

FI19804.hyp Sequence

Translation from 0 to 1344

> FI19804.hyp
EIVGHKSSVFSEREFKLKSRIKMSPNNSAEKPVNPNEHLHIPKWINEEYF
QPIIEKDVENFDKIINLVPIAATAPGENYTSIMIRVIVDILLKDGSEQRV
SYILKTMLEADSGADVIDGMGLFPKERKMYEVHIPQFVKLYKEAGLEIEL
APKCLHVDATDELITMVFEDLSRQNFKNFDRLKGFDLPHMREVLRKLAEL
HAASVVAKEINGPYDAMYNMSIYNEQSRDLFESLGKQREEQFLKAMRNWD
LENAESYIARMWDPLEVFEEAVQVNQVDEDEFNVLNHGDCWSNNIMFNYK
DNGEIDRTILVDLQVGKWGSPAQDLWYLITTSASLDIKIKEFDHFIQIYH
QRLAECLKLLNYSKPIPTLRDLHIMMLKYGFWGPLTAMGVMVATLMPTDK
DANMKMILAQGPEADAIRYRTFINPYYAKAMKVLLPFFDNKGLLKSN*

FI19804.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10550-PD 425 CG10550-PD 1..425 23..447 2233 100 Plus
CG10550-PC 425 CG10550-PC 1..425 23..447 2233 100 Plus
CG10550-PB 425 CG10550-PB 1..425 23..447 2233 100 Plus
CG31288-PA 428 CG31288-PA 8..421 33..444 928 42.5 Plus
CG31102-PB 420 CG31102-PB 2..418 25..444 885 41.6 Plus

FI19804.pep Sequence

Translation from 1 to 1344

> FI19804.pep
EIVGHKSSVFSEREFKLKSRIKMSPNNSAEKPVNPNEHLHIPKWINEEYF
QPIIEKDVENFDKIINLVPIAATAPGENYTSIMIRVIVDILLKDGSEQRV
SYILKTMLEADSGADVIDGMGLFPKERKMYEVHIPQFVKLYKEAGLEIEL
APKCLHVDATDELITMVFEDLSRQNFKNFDRLKGFDLPHMREVLRKLAEL
HAASVVAKEINGPYDAMYNMSIYNEQSRDLFESLGKQREEQFLKAMRNWD
LENAESYIARMWDPLEVFEEAVQVNQVDEDEFNVLNHGDCWSNNIMFNYK
DNGEIDRTILVDLQVGKWGSPAQDLWYLITTSASLDIKIKEFDHFIQIYH
QRLAECLKLLNYSKPIPTLRDLHIMMLKYGFWGPLTAMGVMVATLMPTDK
DANMKMILAQGPEADAIRYRTFINPYYAKAMKVLLPFFDNKGLLKSN*

FI19804.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:38:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17422-PA 425 GF17422-PA 1..423 23..444 1824 76.8 Plus
Dana\GF17421-PA 420 GF17421-PA 4..417 31..444 1486 63.5 Plus
Dana\GF17423-PA 426 GF17423-PA 8..420 34..444 945 44.1 Plus
Dana\GF17424-PA 426 GF17424-PA 6..419 33..444 921 42.5 Plus
Dana\GF17427-PA 417 GF17427-PA 2..415 25..444 889 42 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:38:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12261-PA 425 GG12261-PA 1..425 23..447 2066 87.1 Plus
Dere\GG12266-PA 416 GG12266-PA 2..414 25..444 898 40.6 Plus
Dere\GG12262-PA 428 GG12262-PA 2..421 27..444 854 41.2 Plus
Dere\GG12265-PA 425 GG12265-PA 9..419 34..444 738 37.9 Plus
Dere\GG12254-PA 410 GG12254-PA 6..410 41..447 722 36.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:38:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19366-PA 422 GH19366-PA 1..422 23..444 1497 63.9 Plus
Dgri\GH19368-PA 422 GH19368-PA 1..422 23..444 1495 64.2 Plus
Dgri\GH19367-PA 422 GH19367-PA 1..422 23..444 1472 63.4 Plus
Dgri\GH19369-PA 430 GH19369-PA 2..421 27..444 996 45.2 Plus
Dgri\GH19371-PA 423 GH19371-PA 2..422 25..445 914 41.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10550-PD 425 CG10550-PD 1..425 23..447 2233 100 Plus
CG10550-PC 425 CG10550-PC 1..425 23..447 2233 100 Plus
CG10550-PB 425 CG10550-PB 1..425 23..447 2233 100 Plus
CG31288-PA 428 CG31288-PA 8..421 33..444 928 42.5 Plus
CG31102-PB 420 CG31102-PB 2..418 25..444 885 41.6 Plus
CG31102-PA 416 CG31102-PA 2..414 25..444 863 41.3 Plus
CG31097-PB 420 CG31097-PB 5..414 34..443 781 38.6 Plus
CG6834-PA 895 CG6834-PA 484..893 28..444 722 35.5 Plus
CG6830-PA 891 CG6830-PA 467..882 28..444 717 35.2 Plus
CHKov1-PE 410 CG10618-PE 6..410 41..447 711 35.5 Plus
CG31087-PB 417 CG31087-PB 7..414 26..444 709 34.5 Plus
CG31087-PA 417 CG31087-PA 7..414 26..444 709 34.5 Plus
CG10560-PA 414 CG10560-PA 17..414 41..445 703 36.7 Plus
CG10562-PA 405 CG10562-PA 6..404 41..445 688 35.2 Plus
CG6908-PB 415 CG6908-PB 13..409 41..442 663 36.7 Plus
CG6908-PA 449 CG6908-PA 47..443 41..442 663 36.7 Plus
CG6834-PA 895 CG6834-PA 62..471 42..446 662 33 Plus
CG10553-PA 414 CG10553-PA 17..414 41..445 628 34 Plus
CG6830-PA 891 CG6830-PA 22..455 18..445 622 30.4 Plus
CHKov2-PA 409 CG10675-PA 7..409 42..445 607 32.6 Plus
CG10559-PB 415 CG10559-PB 10..411 41..442 599 32.1 Plus
CG31099-PA 400 CG31099-PA 6..399 41..444 515 28.1 Plus
CG10513-PB 422 CG10513-PB 16..418 42..444 455 32.4 Plus
CG11892-PA 439 CG11892-PA 24..438 32..447 436 28.1 Plus
CG11892-PB 439 CG11892-PB 24..438 32..447 436 28.1 Plus
CG11891-PI 417 CG11891-PI 12..414 41..444 419 29 Plus
CG11891-PH 417 CG11891-PH 12..414 41..444 419 29 Plus
CG33301-PB 407 CG33301-PB 2..405 41..445 417 27.9 Plus
CG33301-PA 407 CG33301-PA 2..405 41..445 417 27.9 Plus
CG11889-PB 417 CG11889-PB 10..414 42..444 410 29.2 Plus
CG11889-PA 417 CG11889-PA 10..414 42..444 410 29.2 Plus
CG11878-PA 420 CG11878-PA 13..417 42..444 397 28.1 Plus
CG10514-PA 413 CG10514-PA 5..410 42..447 363 26 Plus
CG16898-PA 407 CG16898-PA 2..404 41..444 353 25.8 Plus
CG31380-PA 405 CG31380-PA 4..397 44..444 325 24.8 Plus
CG32195-PC 401 CG32195-PC 33..400 71..446 313 27 Plus
CG32195-PB 401 CG32195-PB 33..400 71..446 313 27 Plus
CG32195-PA 401 CG32195-PA 33..400 71..446 313 27 Plus
CG9498-PA 424 CG9498-PA 4..413 33..432 312 26 Plus
CG9497-PB 417 CG9497-PB 11..416 33..444 309 24.8 Plus
CG9497-PA 417 CG9497-PA 11..416 33..444 309 24.8 Plus
CG31098-PA 417 CG31098-PA 5..415 36..444 293 21.9 Plus
CG31436-PA 420 CG31436-PA 12..418 36..444 286 24.8 Plus
CG18765-PB 393 CG18765-PB 16..393 41..447 281 24.3 Plus
CG7135-PA 417 CG7135-PA 9..374 42..403 272 26.3 Plus
CG13360-PA 421 CG13360-PA 15..419 42..443 241 23.7 Plus
CG31300-PA 422 CG31300-PA 12..420 36..445 238 25.6 Plus
CG11893-PA 416 CG11893-PA 2..411 25..442 226 24.8 Plus
CG5644-PA 459 CG5644-PA 35..356 46..358 220 25.3 Plus
CG31974-PC 413 CG31974-PC 33..334 73..361 219 24.3 Plus
CG31974-PB 413 CG31974-PB 33..334 73..361 219 24.3 Plus
CG31975-PC 416 CG31975-PC 15..355 53..381 218 21.7 Plus
CG31975-PB 416 CG31975-PB 15..355 53..381 218 21.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:38:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22569-PA 420 GI22569-PA 1..420 23..444 1495 64.7 Plus
Dmoj\GI22570-PA 429 GI22570-PA 8..421 33..444 978 44.8 Plus
Dmoj\GI22571-PA 423 GI22571-PA 2..422 25..445 914 40.9 Plus
Dmoj\GI22568-PA 414 GI22568-PA 17..411 40..444 680 35.3 Plus
Dmoj\GI22567-PA 417 GI22567-PA 14..416 41..445 672 36.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:38:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22099-PA 424 GL22099-PA 1..409 23..431 1661 72.1 Plus
Dper\GL22098-PA 420 GL22098-PA 3..417 30..444 1556 67.7 Plus
Dper\GL22101-PA 426 GL22101-PA 2..419 29..444 976 45.9 Plus
Dper\GL22100-PA 424 GL22100-PA 6..421 34..447 916 46.8 Plus
Dper\GL22103-PA 397 GL22103-PA 2..395 25..444 892 40.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:38:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27378-PA 424 GA27378-PA 1..409 23..431 1668 72.4 Plus
Dpse\GA10389-PA 420 GA10389-PA 3..417 30..444 1561 67.7 Plus
Dpse\GA16150-PA 426 GA16150-PA 2..419 29..444 973 45.7 Plus
Dpse\GA16010-PA 419 GA16010-PA 2..417 25..444 952 41.3 Plus
Dpse\GA27379-PA 424 GA27379-PA 6..421 34..447 901 46.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:38:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17728-PA 425 GM17728-PA 1..425 23..447 2167 93.2 Plus
Dsec\GM17731-PA 416 GM17731-PA 2..414 25..444 890 40.8 Plus
Dsec\GM17729-PA 428 GM17729-PA 8..421 33..444 855 41.5 Plus
Dsec\GM17726-PA 416 GM17726-PA 4..413 24..444 719 34.4 Plus
Dsec\GM17720-PA 410 GM17720-PA 6..410 41..447 710 36.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:38:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18211-PA 425 GD18211-PA 1..425 23..447 2187 93.9 Plus
Dsim\GD18214-PA 420 GD18214-PA 2..418 25..444 915 41.5 Plus
Dsim\GD18212-PA 428 GD18212-PA 8..421 33..444 856 41.5 Plus
Dsim\GD18209-PA 416 GD18209-PA 4..413 24..444 718 34.4 Plus
Dsim\GD18204-PA 410 GD18204-PA 6..410 41..447 716 36.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:38:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23758-PA 419 GJ23758-PA 1..419 23..444 1555 67.5 Plus
Dvir\GJ23759-PA 429 GJ23759-PA 8..421 33..444 923 45.6 Plus
Dvir\GJ23760-PA 423 GJ23760-PA 2..422 25..445 910 41.8 Plus
Dvir\GJ23756-PA 419 GJ23756-PA 14..418 40..445 721 35.7 Plus
Dvir\GJ23755-PA 418 GJ23755-PA 13..417 40..446 706 34.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:38:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14333-PA 428 GK14333-PA 1..426 23..445 1578 66.4 Plus
Dwil\GK14332-PA 426 GK14332-PA 1..426 23..447 1484 63.6 Plus
Dwil\GK14334-PA 436 GK14334-PA 8..423 34..445 970 45.4 Plus
Dwil\GK14335-PA 431 GK14335-PA 6..424 33..444 945 44.8 Plus
Dwil\GK14337-PA 431 GK14337-PA 2..424 29..444 940 44.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:38:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10712-PA 424 GE10712-PA 1..424 23..447 2039 85.9 Plus
Dyak\GE10715-PA 416 GE10715-PA 2..414 25..444 904 41 Plus
Dyak\GE10713-PA 428 GE10713-PA 2..421 27..444 842 41.4 Plus
Dyak\GE10714-PA 425 GE10714-PA 9..419 34..444 771 38 Plus
Dyak\CHKov1-PA 410 GE10704-PA 6..410 41..447 737 36 Plus