Clone FI19805 Report

Search the DGRC for FI19805

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:198
Well:5
Vector:pOT2
Associated Gene/TranscriptCG17896-RB
Protein status:FI19805.pep: gold
Sequenced Size:1845

Clone Sequence Records

FI19805.complete Sequence

1845 bp assembled on 2012-04-10

GenBank Submission: BT133399.1

> FI19805.complete
CGCGATCCGATCCCCGCACCAAATTCTCATCTCCGTATCCCCAAGATGTC
CCTAGTGCGATTGATCGGAGCAGAGGCCCGCCATCTGGCAAAGAGGTCCT
ACTCTTCAGCCGCTCCCACAACCAAGCTCTTCATCGACGGCAAGTTCGTT
GAGTCGAAGACGAACGAATGGATTGACGTGCACGATCCGGCCACCAACCA
AGTGGTCACCCGCGTGCCCAAGGCCACACAGGCGGAGATGCAGGCGGCCC
TTGAGTCGAACAAGAAGGCTTTTCGCTCGTGGAGCAACCAGTCGATCCTC
ACCCGCCAGCAGGTGATGTTCAAGCTGCAGGCTCTCATCAAGGAGAACAT
GGGTGAGCTGGCCAAGAACATTACCAAGGAGCAGGGCAAAACCTTGGCCG
ACGCAGAGGGCGACGTGCTCCGCGGCCTTCAGGTGGTGGAACATTGCTGC
AGCATCCCATCTCTGCAGATGGGCGAAACCGTAGCCAACGTGGCCAGGGA
CATGGATACGTACTCACTAGTGCTGCCCCTCGGAGTAACCGCTGGCGTTG
CGCCGTTCAATTTCCCGGCCATGATACCGCTGTGGATGTTCCCGGTGGCC
ATCACCACCGGTAACACTATGCTGCTGAAGCCATCGGAACGTGTGCCTGG
TGCAACCATGTTGCTGATGGAGCTTCTTAACGAAGCTGGCTGTCCGCCGG
GTGTCGTCAACGTAATCCATGGCCAACATGACGCTGTGAACTTCATCTGC
GATGCTCCCGAAATTAAGGCAGTGTCCTTTGTGGGCTCCGACCAGGCAGG
CAAGTACATTTACGAGCGGGCTGGCAAGAATGGCAAGCGGGTGCAATCTA
ATATGGGCGCTAAGAACCACGGCATCATCCTGGGCGATGCCAACAAGGAG
AATACTTTGAACCAGTTGGCAGGTGCCGCCTTTGGAGCTGCTGGTCAGCG
TTGCATGGCATTGTCTACGGCTGTCTTTGTCGGCGATGCCCAGGCATGGA
TTCCCGATCTGGTGGAGCGTGCCCAGAAGCTGAAGGTAAATGCCGGCCAT
GTACCTGGAACTGACGTGGGTCCCGTGATCAGTGCCGCCTCACGCCAACG
CATTAATGACCTGATTGAGTCTGGGGTCAAGGAGGGAGCTAAGCTTATCC
TGGACGGCAGGAAGATAACCGTGCCCGGATACGAGGATGGATACTTTGTG
GGACCAACCATCCTAAGCGATGTTACGCCCAGCATGAAGTGCTACACTGA
GGAGATCTTTGGCCCTGTGTTGGTTATCCTGAAGGCCGACACCTTGGACG
ATGCCATTGGCATTGTAAATGCCAATCCTTATGGAAATGGTACCGCCGTA
TTCACCACCAATGGAGCGGCAGCCCGCAAGTTTGTCAACGAAATTGATGC
TGGTCAGGTTGGCGTGAATGTGCCAATTCCCGTGCCCCTGCCCATGTTCT
CCTTTACCGGAACTCGTGGCTCTTTCCGCGGCGACCATCACTTCTATGGC
AAACAGGGTATCAAATTCTACACCCAGACGAAGACGGTCACCCAGTTGTG
GCGCAAAACGGATGTGACCCACACCCAGGCGGCTGTGGCCATGCCCACCA
TGAAATAGGCAGAACCTGAAAAGATTCTGGAGAAGATTCAGATGAAATGT
TCCACGTATTGAATTTCTGGATGCTTGCACACAGGACGTATTTAGAAACT
AGATACAAAGAAATTATTGCATTTATTTGTGTGCCTGTTTATTAGATTTA
AGACGATTTGAGACGAAACGTGTATCTTGAAAATAATTGTATGTAAATGA
TAACAATTAAACGATTATTATGTAAAGAAAAAAAAAAAAAAAAAA

FI19805.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 384910..386663 1827..74 8770 100 Minus
chrX 22417052 chrX 387420..387495 76..1 380 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 490875..492630 1829..74 8780 100 Minus
X 23542271 X 493387..493462 76..1 380 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:36:05 has no hits.

FI19805.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:36:52 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 384910..386661 76..1827 100 <- Minus
chrX 387421..387495 1..75 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-10 15:45:14 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17896-RB 1..1563 46..1608 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:06:20 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17896-RB 1..1563 46..1608 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:35:05 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17896-RB 1..1563 46..1608 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-10 15:45:14 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17896-RB 33..1859 1..1827 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:06:20 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17896-RB 33..1859 1..1827 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:35:05 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
CG17896-RB 34..1860 1..1827 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:52 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
X 490877..492628 76..1827 100 <- Minus
X 493388..493462 1..75 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:52 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
X 490877..492628 76..1827 100 <- Minus
X 493388..493462 1..75 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:52 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
X 490877..492628 76..1827 100 <- Minus
X 493388..493462 1..75 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:06:20 Download gff for FI19805.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 384910..386661 76..1827 100 <- Minus
arm_X 387421..387495 1..75 100   Minus

FI19805.hyp Sequence

Translation from 0 to 1607

> FI19805.hyp
RDPIPAPNSHLRIPKMSLVRLIGAEARHLAKRSYSSAAPTTKLFIDGKFV
ESKTNEWIDVHDPATNQVVTRVPKATQAEMQAALESNKKAFRSWSNQSIL
TRQQVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHCC
SIPSLQMGETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVA
ITTGNTMLLKPSERVPGATMLLMELLNEAGCPPGVVNVIHGQHDAVNFIC
DAPEIKAVSFVGSDQAGKYIYERAGKNGKRVQSNMGAKNHGIILGDANKE
NTLNQLAGAAFGAAGQRCMALSTAVFVGDAQAWIPDLVERAQKLKVNAGH
VPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITVPGYEDGYFV
GPTILSDVTPSMKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAV
FTTNGAAARKFVNEIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYG
KQGIKFYTQTKTVTQLWRKTDVTHTQAAVAMPTMK*

FI19805.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG17896-PB 520 CG17896-PB 1..520 16..535 2681 100 Plus
CG17896-PA 511 CG17896-PA 2..511 26..535 2636 100 Plus
CG31075-PA 485 CG31075-PA 11..481 41..514 559 32.5 Plus
CG31075-PB 508 CG31075-PB 25..504 33..514 552 31.9 Plus
Ssadh-PE 509 CG4685-PE 24..501 36..513 510 27.6 Plus

FI19805.pep Sequence

Translation from 0 to 1607

> FI19805.pep
RDPIPAPNSHLRIPKMSLVRLIGAEARHLAKRSYSSAAPTTKLFIDGKFV
ESKTNEWIDVHDPATNQVVTRVPKATQAEMQAALESNKKAFRSWSNQSIL
TRQQVMFKLQALIKENMGELAKNITKEQGKTLADAEGDVLRGLQVVEHCC
SIPSLQMGETVANVARDMDTYSLVLPLGVTAGVAPFNFPAMIPLWMFPVA
ITTGNTMLLKPSERVPGATMLLMELLNEAGCPPGVVNVIHGQHDAVNFIC
DAPEIKAVSFVGSDQAGKYIYERAGKNGKRVQSNMGAKNHGIILGDANKE
NTLNQLAGAAFGAAGQRCMALSTAVFVGDAQAWIPDLVERAQKLKVNAGH
VPGTDVGPVISAASRQRINDLIESGVKEGAKLILDGRKITVPGYEDGYFV
GPTILSDVTPSMKCYTEEIFGPVLVILKADTLDDAIGIVNANPYGNGTAV
FTTNGAAARKFVNEIDAGQVGVNVPIPVPLPMFSFTGTRGSFRGDHHFYG
KQGIKFYTQTKTVTQLWRKTDVTHTQAAVAMPTMK*

FI19805.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20808-PA 520 GF20808-PA 1..520 16..535 2712 96.7 Plus
Dana\GF17265-PA 507 GF17265-PA 20..499 32..513 521 28.5 Plus
Dana\GF22966-PA 485 GF22966-PA 11..481 41..514 508 32.1 Plus
Dana\GF22728-PA 520 GF22728-PA 40..511 41..513 462 29.4 Plus
Dana\GF14331-PA 913 GF14331-PA 433..910 41..514 448 29 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:27:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12757-PA 520 GG12757-PA 1..520 16..535 2762 98.8 Plus
Dere\GG12158-PA 485 GG12158-PA 11..481 41..514 537 32.7 Plus
Dere\GG12233-PA 509 GG12233-PA 24..464 36..473 504 27.9 Plus
Dere\GG25345-PA 520 GG25345-PA 40..511 41..513 484 29.3 Plus
Dere\GG21301-PA 913 GG21301-PA 433..910 41..514 449 28.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:27:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24555-PA 520 GH24555-PA 1..520 16..535 2562 92.7 Plus
Dgri\GH13227-PA 518 GH13227-PA 41..509 43..513 566 32.4 Plus
Dgri\GH18965-PA 485 GH18965-PA 4..481 35..514 529 32.9 Plus
Dgri\GH18609-PA 501 GH18609-PA 22..493 41..513 509 28 Plus
Dgri\GH13324-PA 521 GH13324-PA 41..512 41..513 487 29.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:13:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG17896-PB 520 CG17896-PB 1..520 16..535 2681 100 Plus
CG17896-PA 511 CG17896-PA 2..511 26..535 2636 100 Plus
CG31075-PA 485 CG31075-PA 11..481 41..514 559 32.5 Plus
CG31075-PB 508 CG31075-PB 25..504 33..514 552 31.9 Plus
Ssadh-PE 509 CG4685-PE 24..501 36..513 510 27.6 Plus
Ssadh-PD 509 CG4685-PD 24..501 36..513 510 27.6 Plus
Ssadh-PC 509 CG4685-PC 24..501 36..513 510 27.6 Plus
Ssadh-PB 509 CG4685-PB 24..501 36..513 510 27.6 Plus
Ssadh-PA 509 CG4685-PA 24..501 36..513 510 27.6 Plus
Aldh-PB 520 CG3752-PB 40..511 41..513 503 29.8 Plus
Aldh-PA 520 CG3752-PA 40..511 41..513 503 29.8 Plus
CG8665-PA 913 CG8665-PA 433..910 41..514 454 29.4 Plus
CG9629-PA 540 CG9629-PA 67..522 61..514 355 24.4 Plus
P5CDh1-PE 574 CG7145-PE 213..465 178..426 238 31.3 Plus
P5CDh1-PF 574 CG7145-PF 213..465 178..426 238 31.3 Plus
P5CDh1-PD 574 CG7145-PD 213..465 178..426 238 31.3 Plus
P5CDh1-PB 574 CG7145-PB 213..465 178..426 238 31.3 Plus
P5CDh1-PA 574 CG7145-PA 213..465 178..426 238 31.3 Plus
Aldh-III-PR 497 CG11140-PR 2..427 78..512 223 23.7 Plus
Aldh-III-PM 498 CG11140-PM 2..427 78..512 223 23.7 Plus
Aldh-III-PL 498 CG11140-PL 2..427 78..512 223 23.7 Plus
Aldh-III-PK 498 CG11140-PK 2..427 78..512 223 23.7 Plus
Aldh-III-PI 498 CG11140-PI 2..427 78..512 223 23.7 Plus
Aldh-III-PP 563 CG11140-PP 68..493 78..512 223 23.7 Plus
Aldh-III-PN 563 CG11140-PN 67..492 78..512 223 23.7 Plus
Aldh-III-PE 497 CG11140-PE 2..427 78..512 211 23.3 Plus
Aldh-III-PS 498 CG11140-PS 2..427 78..512 211 23.3 Plus
Aldh-III-PU 501 CG11140-PU 2..427 78..512 211 23.3 Plus
Aldh-III-PO 563 CG11140-PO 67..492 78..512 211 23.3 Plus
Aldh-III-PQ 564 CG11140-PQ 68..493 78..512 211 23.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:27:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16236-PA 520 GI16236-PA 1..520 16..535 2550 91.9 Plus
Dmoj\GI18106-PA 510 GI18106-PA 2..501 21..513 552 31 Plus
Dmoj\GI18107-PA 499 GI18107-PA 20..490 41..513 546 31.9 Plus
Dmoj\GI10356-PA 489 GI10356-PA 5..481 36..513 518 28.3 Plus
Dmoj\GI17663-PA 519 GI17663-PA 2..510 11..513 515 30.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:27:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20166-PA 516 GL20166-PA 1..516 16..535 2585 94.4 Plus
Dper\GL23630-PA 485 GL23630-PA 11..481 41..514 534 32.3 Plus
Dper\GL26144-PA 520 GL26144-PA 41..511 41..513 521 30.5 Plus
Dper\GL21675-PA 489 GL21675-PA 2..481 32..513 498 26.9 Plus
Dper\GL26145-PA 521 GL26145-PA 41..512 41..513 463 29.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14712-PA 520 GA14712-PA 1..520 16..535 2622 95.2 Plus
Dpse\GA15986-PA 485 GA15986-PA 11..481 41..514 536 32.5 Plus
Dpse\GA22496-PA 485 GA22496-PA 11..481 41..514 536 32.3 Plus
Dpse\GA25309-PA 520 GA25309-PA 41..511 41..513 520 30.5 Plus
Dpse\GA18355-PA 505 GA18355-PA 14..497 29..513 510 26.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:27:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19037-PA 520 GM19037-PA 1..520 16..535 2770 99.4 Plus
Dsec\GM10152-PA 485 GM10152-PA 11..481 41..514 532 32.5 Plus
Dsec\GM10233-PA 509 GM10233-PA 24..501 36..513 504 27.8 Plus
Dsec\GM17439-PA 520 GM17439-PA 40..511 41..513 489 29.8 Plus
Dsec\GM23412-PA 913 GM23412-PA 433..910 41..514 463 29 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16476-PA 517 GD16476-PA 1..517 19..535 2732 98.3 Plus
Dsim\GD18107-PA 485 GD18107-PA 11..481 41..514 531 32.7 Plus
Dsim\GD18186-PA 509 GD18186-PA 24..501 36..513 498 27.6 Plus
Dsim\GD23600-PA 538 GD23600-PA 40..529 41..513 464 28.9 Plus
Dsim\GD24321-PA 913 GD24321-PA 433..910 41..514 464 29 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15927-PA 520 GJ15927-PA 1..520 16..535 2579 92.5 Plus
Dvir\GJ24150-PA 485 GJ24150-PA 11..481 41..514 516 32.1 Plus
Dvir\GJ10208-PA 501 GJ10208-PA 17..493 36..513 516 28.3 Plus
Dvir\GJ16294-PA 527 GJ16294-PA 8..520 8..521 515 29.6 Plus
Dvir\GJ17859-PA 519 GJ17859-PA 2..510 11..513 514 30.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:27:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25041-PA 520 GK25041-PA 1..520 16..535 2625 95 Plus
Dwil\GK12053-PA 486 GK12053-PA 6..482 36..514 553 33.3 Plus
Dwil\GK14395-PA 504 GK14395-PA 20..496 36..513 536 28.5 Plus
Dwil\GK24201-PA 521 GK24201-PA 41..512 41..513 511 30.2 Plus
Dwil\GK18741-PA 918 GK18741-PA 438..915 41..514 463 29.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:27:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16583-PA 520 GE16583-PA 1..520 16..535 2770 99.4 Plus
Dyak\GE10603-PA 485 GE10603-PA 11..481 41..514 537 32.7 Plus
Dyak\GE10681-PA 509 GE10681-PA 24..501 36..513 499 28 Plus
Dyak\GE18837-PA 520 GE18837-PA 40..511 41..513 483 29.6 Plus
Dyak\GE12917-PA 913 GE12917-PA 433..910 41..514 452 28.6 Plus