Clone FI19809 Report

Search the DGRC for FI19809

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:198
Well:9
Vector:pOT2
Associated Gene/TranscriptCG31959-RB
Protein status:FI19809.pep: gold
Sequenced Size:942

Clone Sequence Records

FI19809.complete Sequence

942 bp assembled on 2012-03-22

GenBank Submission: BT133341.1

> FI19809.complete
CGATTCAAATGACAACGAACAACAGGCCGTACTCGTAGTAATTAAGTTTT
TTAATCATCAATATTGAAGTCATCATGGATCAGCTAAAGTCAAGGATTTC
AAAGCCTGGCCCAAACAATTGACACGAAAAAGGGAGGCAGCAAGAAGGAT
TTCCCTGGATATATATATATATATATAGAATCTCTTGTGTGTGTGTGTGT
GTGTGTTTGCCCCTGTTTCGCTTTTATTTTCTTTTCCATTTTATTTCTTT
TGTTGCCGTTTGAAAATGGATATTGCCTTGCGTGGCACAAACAGAGCATC
GTCAACATCAACGACTGGAACTGGTCTGCATCATGCTGTGTCATTGGGCA
ACATTGAGGTCTCCACCAAGACCACCTACTCCAGCCACATGGATCGCAGC
TACGACTCCGAGGATGAACACACTGGTCGCCGAAGACTTCGCCATACGCT
GTCCACCGAGTTGCATCCTCACACTTCTGTTTACTCACGCGGAGATATTC
GGGAACAGTACTGCCTCACAGATCGCCAGTTGCACAGCATAGAGCAGCGT
CCTAGGCGAGAACGATTTTTTGGCTGCCTTTCGCGACGCGGTCAAACGCA
ATCGGGCAGTTTTTTGGGCGGCTGTGTGGGTCGGCGGGTGCCCTCCGATG
AGAATTTGGCCGCCTATGCTCCATTTGAAAAATATCCACGCTACCAGAAC
AGCTATACGGACACACACGAATTGGAAAGTTCCTATTTTCGCCGTCAACC
GGCCTCGATTCTGAGTACTGGTAAATCGGGTGAAGCGGATCTGGGTGGAC
GCTACACCTGGATTGGCCAACAGCAGGTGACCAACAACAATCCCGACTAC
CAATCGGACCACAGGTATGGACCGCCTGGCAAGGCGATCGAAAGTCGATA
CAAAAACAGATAACCATGAACCAAAAAAAAAAAAAAAAAAAA

FI19809.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:08:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3757151..3757477 1..325 1570 99.4 Plus
chr2L 23010047 chr2L 3758500..3758732 690..922 1165 100 Plus
chr2L 23010047 chr2L 3758255..3758439 506..690 925 100 Plus
chr2L 23010047 chr2L 3758057..3758196 369..508 700 100 Plus
chr2L 23010047 chr2L 3757562..3757609 323..370 240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:08:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3757631..3757957 1..325 1570 99.4 Plus
2L 23513712 2L 3758980..3759219 690..929 1200 100 Plus
2L 23513712 2L 3758735..3758919 506..690 925 100 Plus
2L 23513712 2L 3758537..3758676 369..508 700 100 Plus
2L 23513712 2L 3758042..3758089 323..370 240 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:08:34 has no hits.

FI19809.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:09:29 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3757563..3757609 324..370 100 -> Plus
chr2L 3758059..3758196 371..508 100 -> Plus
chr2L 3758258..3758439 509..690 100 -> Plus
chr2L 3758501..3758732 691..922 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-22 13:57:26 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
CG31959-RB 1..648 266..913 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:02 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
CG43707-RE 1..599 266..864 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:22:38 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
CG43707-RE 1..599 266..864 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-22 13:57:25 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
CG31959-RB 1..924 1..922 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:02 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
CG43707-RD 376..1299 1..922 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:22:38 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
CG43707-RD 376..1299 1..922 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:29 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3757631..3757955 1..323 99 -> Plus
2L 3758043..3758089 324..370 100 -> Plus
2L 3758539..3758676 371..508 100 -> Plus
2L 3758738..3758919 509..690 100 -> Plus
2L 3758981..3759212 691..922 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:29 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3757631..3757955 1..323 99 -> Plus
2L 3758043..3758089 324..370 100 -> Plus
2L 3758539..3758676 371..508 100 -> Plus
2L 3758738..3758919 509..690 100 -> Plus
2L 3758981..3759212 691..922 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:29 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3757631..3757955 1..323 99 -> Plus
2L 3758043..3758089 324..370 100 -> Plus
2L 3758539..3758676 371..508 100 -> Plus
2L 3758738..3758919 509..690 100 -> Plus
2L 3758981..3759212 691..922 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:02 Download gff for FI19809.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3758981..3759212 691..922 100   Plus
arm_2L 3757631..3757955 1..323 99 -> Plus
arm_2L 3758043..3758089 324..370 100 -> Plus
arm_2L 3758539..3758676 371..508 100 -> Plus
arm_2L 3758738..3758919 509..690 100 -> Plus

FI19809.hyp Sequence

Translation from 265 to 912

> FI19809.hyp
MDIALRGTNRASSTSTTGTGLHHAVSLGNIEVSTKTTYSSHMDRSYDSED
EHTGRRRLRHTLSTELHPHTSVYSRGDIREQYCLTDRQLHSIEQRPRRER
FFGCLSRRGQTQSGSFLGGCVGRRVPSDENLAAYAPFEKYPRYQNSYTDT
HELESSYFRRQPASILSTGKSGEADLGGRYTWIGQQQVTNNNPDYQSDHR
YGPPGKAIESRYKNR*

FI19809.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG43707-PG 1976 CG43707-PG 1..199 1..199 1061 100 Plus
CG43707-PF 1981 CG43707-PF 1..199 1..199 1061 100 Plus
CG43707-PI 2007 CG43707-PI 1..199 1..199 1061 100 Plus
CG43707-PE 2021 CG43707-PE 1..199 1..199 1061 100 Plus

FI19809.pep Sequence

Translation from 265 to 912

> FI19809.pep
MDIALRGTNRASSTSTTGTGLHHAVSLGNIEVSTKTTYSSHMDRSYDSED
EHTGRRRLRHTLSTELHPHTSVYSRGDIREQYCLTDRQLHSIEQRPRRER
FFGCLSRRGQTQSGSFLGGCVGRRVPSDENLAAYAPFEKYPRYQNSYTDT
HELESSYFRRQPASILSTGKSGEADLGGRYTWIGQQQVTNNNPDYQSDHR
YGPPGKAIESRYKNR*

FI19809.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15252-PA 223 GF15252-PA 1..213 1..201 852 79.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:05:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24965-PA 208 GG24965-PA 1..204 1..204 1079 99 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13707-PA 313 GH13707-PA 1..202 1..201 888 86.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG43707-PG 1976 CG43707-PG 1..199 1..199 1061 100 Plus
CG43707-PF 1981 CG43707-PF 1..199 1..199 1061 100 Plus
CG43707-PI 2007 CG43707-PI 1..199 1..199 1061 100 Plus
CG43707-PE 2021 CG43707-PE 1..199 1..199 1061 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23929-PA 2055 GI23929-PA 1..213 1..198 855 80.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18674-PA 227 GL18674-PA 1..205 1..201 871 87.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:05:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16588-PA 225 GA16588-PA 1..203 1..201 848 88.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:05:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18433-PA 215 GM18433-PA 1..215 1..215 1121 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:05:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23252-PA 215 GD23252-PA 1..215 1..215 1133 99.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21191-PA 230 GJ21191-PA 1..202 1..201 858 83.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14649-PA 187 GK14649-PA 4..187 17..200 862 89.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:05:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18255-PA 215 GE18255-PA 1..215 1..215 1119 97.7 Plus