Clone FI19812 Report

Search the DGRC for FI19812

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:198
Well:12
Vector:pOT2
Associated Gene/TranscriptCG5484-RC
Protein status:FI19812.pep: gold
Sequenced Size:1444

Clone Sequence Records

FI19812.complete Sequence

1444 bp assembled on 2012-03-22

GenBank Submission: BT133343.1

> FI19812.complete
ATCCAGGAAGATGAACTACAATCCAAATCCGGGTATGCGGAACCGTAAGT
GGGAGAACTCCTCAGCTGCCGGTCGCCCAAGGCCGCCGAAGCGTGTGAGT
GATGTTAACGCCATGGGACCCTCGGCTCCGATGATGGGCGGTGGCGCCAC
CTTCATGGCCCCGCCCACCGGCCCCGGAATACTAGATCCCAATATGTACG
GAGCACCTGCTCCGGCCCCGGTCAACAGCTATGGCTTCGACCCCAATCTC
GGCCAGCCCTCGCAGCACATTCAGCAGCCACCACAACAGCAGCCCGGATA
CGGATATGGAGCACCACCTCCCCAACAGGCGGCTGGGCCACCCACCTACG
GAATAGGAGCACCTCAGCCTGTAGCTCCACCCACTGGACAGTACCCACAG
TTCGCCATGTTCCAGCAGCCCATCGTGCAAGACATGGCCATGCAGTACGG
TCAGAAACTAGCGGATCAGGGCAAGCAGATCATGGAGAATCAGTTCGAGA
AGTGGGTGCCCGTAGCCAAGCTCAAGTACTACTTCGCAGTGGACAACGCC
TACGTGGGCAGGAAGTTGCGCCTTCTGTTTTTCCCCTATATGCATAAGGA
TTGGTCCCTGCGCTACGACCAAGAGCACCCAGTGCAACCACGATATGATG
TTAATGCGCCAGATCTCTATCTGCCCACCATGGGCTACATCACATACGTG
ATCGTAGCGGGTTTGCTTCTGGGCATGCAGAAGCGATTTTCGCCGGAGCA
GCTCGGCATTCAGGCCTCCAGCGCCATGGCATATAGCATTTTCGAATTGG
TCATTTACTCCCTAGCCCTGTACGTAATGAATGTGAAGACGAGCCTGAAA
ACGCTTGATCTGCTGGCATTCACTGGTTATAAGTACGTTAATATAGTTGT
CTGCCTGATGGTTAGCACGCTGTTCTTTAAGTCTGGATATTATATAGCAC
TGGCGTATACCAGTTTCTCCTTCGGTTTCTTCATGCTCCGCACGTTGCGG
ACGAAACTGCTGCAGGACAACTCCCCGGCTGCGCCCAGTGGAGCCATCAA
CTACGATCCGTATGGCAATCCACAGCAATTTGACTATAGCGGCGGGAAAA
AGCGCAAACTCTACTTCCTGTTCATGATCGTCGCGGGACAGGCGCTGTTT
GCCTTCCTGCTCTCCAAGCACCTGTATCTGCCCGAGGCGGAGGTGCTGAC
GGTGCCCAAGACCTTCTAACCCACAGGCTTGATAGGTTAATTTGCATACT
CCTTGAGTTAATCGTGGCCAGGGTGGCCACTCACATGTCGAACGATTCCA
CAGAGCCTAGGCATTGTGTTTTCCAGCATGAAGTTTGTGGTTGTCTCATT
TGAGACTCGAGCGAGAGAAGCATATTTTTGTTAGAAACAAACACATTTTA
TAAATAAATACCAGCTATGAAAACTAAAAAAAAAAAAAAAAAAA

FI19812.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 22541430..22541969 60..599 2685 99.8 Plus
chr3R 27901430 chr3R 22542468..22542908 985..1425 2175 99.5 Plus
chr3R 27901430 chr3R 22542022..22542410 597..985 1930 99.7 Plus
chr3R 27901430 chr3R 22541070..22541128 1..59 280 98.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:46
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26718328..26718867 60..599 2685 99.8 Plus
3R 32079331 3R 26719366..26719808 985..1427 2185 99.5 Plus
3R 32079331 3R 26718920..26719308 597..985 1945 100 Plus
3R 32079331 3R 26717968..26718026 1..59 280 98.3 Plus
Blast to na_te.dros performed on 2019-03-15 13:09:47 has no hits.

FI19812.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:11:03 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 22541070..22541128 1..59 98 -> Plus
chr3R 22541430..22541968 60..598 99 -> Plus
chr3R 22542024..22542410 599..985 99 -> Plus
chr3R 22542469..22542908 986..1425 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-22 16:36:25 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
CG5484-RC 1..1209 11..1219 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:24 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
CG5484-RC 1..1209 11..1219 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:23:18 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
CG5484-RC 1..1209 11..1219 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-22 16:36:24 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
CG5484-RC 121..1545 1..1425 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:24 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
CG5484-RC 98..1522 1..1425 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:23:18 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
CG5484-RC 98..1522 1..1425 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:03 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26719367..26719806 986..1425 99   Plus
3R 26718922..26719308 599..985 100 -> Plus
3R 26717968..26718026 1..59 98 -> Plus
3R 26718328..26718866 60..598 99 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:03 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26719367..26719806 986..1425 99   Plus
3R 26718922..26719308 599..985 100 -> Plus
3R 26717968..26718026 1..59 98 -> Plus
3R 26718328..26718866 60..598 99 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:03 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
3R 26719367..26719806 986..1425 99   Plus
3R 26718922..26719308 599..985 100 -> Plus
3R 26717968..26718026 1..59 98 -> Plus
3R 26718328..26718866 60..598 99 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:24 Download gff for FI19812.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22543690..22543748 1..59 98 -> Plus
arm_3R 22544050..22544588 60..598 99 -> Plus
arm_3R 22544644..22545030 599..985 100 -> Plus
arm_3R 22545089..22545528 986..1425 99   Plus

FI19812.hyp Sequence

Translation from 0 to 1218

> FI19812.hyp
SRKMNYNPNPGMRNRKWENSSAAGRPRPPKRVSDVNAMGPSAPMMGGGAT
FMAPPTGPGILDPNMYGAPAPAPVNSYGFDPNLGQPSQHIQQPPQQQPGY
GYGAPPPQQAAGPPTYGIGAPQPVAPPTGQYPQFAMFQQPIVQDMAMQYG
QKLADQGKQIMENQFEKWVPVAKLKYYFAVDNAYVGRKLRLLFFPYMHKD
WSLRYDQEHPVQPRYDVNAPDLYLPTMGYITYVIVAGLLLGMQKRFSPEQ
LGIQASSAMAYSIFELVIYSLALYVMNVKTSLKTLDLLAFTGYKYVNIVV
CLMVSTLFFKSGYYIALAYTSFSFGFFMLRTLRTKLLQDNSPAAPSGAIN
YDPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFLLSKHLYLPEAEVLT
VPKTF*

FI19812.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG5484-PC 402 CG5484-PC 1..402 4..405 2147 100 Plus
CG5484-PA 397 CG5484-PA 1..397 4..405 2094 98.5 Plus
CG5484-PB 393 CG5484-PB 1..393 4..405 2070 97.5 Plus

FI19812.pep Sequence

Translation from 1 to 1218

> FI19812.pep
SRKMNYNPNPGMRNRKWENSSAAGRPRPPKRVSDVNAMGPSAPMMGGGAT
FMAPPTGPGILDPNMYGAPAPAPVNSYGFDPNLGQPSQHIQQPPQQQPGY
GYGAPPPQQAAGPPTYGIGAPQPVAPPTGQYPQFAMFQQPIVQDMAMQYG
QKLADQGKQIMENQFEKWVPVAKLKYYFAVDNAYVGRKLRLLFFPYMHKD
WSLRYDQEHPVQPRYDVNAPDLYLPTMGYITYVIVAGLLLGMQKRFSPEQ
LGIQASSAMAYSIFELVIYSLALYVMNVKTSLKTLDLLAFTGYKYVNIVV
CLMVSTLFFKSGYYIALAYTSFSFGFFMLRTLRTKLLQDNSPAAPSGAIN
YDPYGNPQQFDYSGGKKRKLYFLFMIVAGQALFAFLLSKHLYLPEAEVLT
VPKTF*

FI19812.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:06:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16451-PA 403 GF16451-PA 1..403 4..405 1560 81.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11496-PA 397 GG11496-PA 1..397 4..405 1998 95.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:06:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14235-PA 408 GH14235-PA 1..408 4..405 1391 71.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG5484-PC 402 CG5484-PC 1..402 4..405 2147 100 Plus
CG5484-PA 397 CG5484-PA 1..397 4..405 2094 98.5 Plus
CG5484-PB 393 CG5484-PB 1..393 4..405 2070 97.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:06:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22142-PA 403 GI22142-PA 1..403 4..405 1484 75.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23107-PA 398 GL23107-PA 135..398 143..405 1185 87.1 Plus
Dper\GL23107-PA 398 GL23107-PA 1..59 4..63 250 76.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:06:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18917-PA 399 GA18917-PA 1..399 4..405 1453 75.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10339-PA 397 GM10339-PA 1..397 4..405 2030 97.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:06:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21299-PA 397 GD21299-PA 1..397 4..405 2042 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:06:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24261-PA 407 GJ24261-PA 1..407 4..405 1477 74.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13328-PA 399 GK13328-PA 2..398 3..404 1380 72.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23687-PA 397 GE23687-PA 1..397 4..405 1990 95 Plus