Clone FI19814 Report

Search the DGRC for FI19814

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:198
Well:14
Vector:pOT2
Associated Gene/TranscriptCG15400-RB
Protein status:FI19814.pep: gold
Sequenced Size:1217

Clone Sequence Records

FI19814.complete Sequence

1217 bp assembled on 2012-04-06

GenBank Submission: BT133365.1

> FI19814.complete
ATTTCATATTGGCAGAAAGACTTGAAAATATAAAAGGAGCCAGTTGCTAA
AATATTTTAAGACTGAAAACAATGGAGTCGATAGTGCACATTCTTTCGGA
TGCGTACCATACAACGCTCACGCGGGAGCTTTTCATCAACGAATGGGCTC
AGGAACGCTTGAGTTTTGGAAGGCCCCTTTGGCATTTTCTCAGCGTTCAT
TTGGAGCCAAACAAAATGTTCAACATCATTATCCCCCTATGTGGTATCTT
CAGTCAGGAAATCCTCGTGCATCTCTTCACGGCATTTACCCTGATTAGCA
CACTGAACTCCTTCGAAAAATGGATATATCCGGAGACGCGTCCTTTGTGG
TTTCTGCGAGAGCAGTTTGCCAATAATGTGGTTGTAAAGAAACCGGCGGT
GGCCTTGGAAAGTCATCAGCTGAGCTGCGAGATGACCGGTGGGCTGCCCT
GCGCCCACTCAATGACCTTCACGGTGTTCGTACTCATCCTGGCCTCGTTC
TTCTTCGTTCACTGCTGGGATCGCTTTGCTGCGTTGCGCTCTTCCTTCTG
CCGCTGCATAATGTACCTGCTGATCATTGGAATGGTGGTCTGTATGTGGC
TGAGTCGCCTCTACCTGGCCACCGAGTTTCTGCACCAGTGCATACTGGGA
AGTTACCTGGGAATTAGGTCTCTTTGCACCTTTGAGGGAAATGTGAAGTA
CTTGTTCTCGCGACCACGTCGCTATGCGGTCTCAGCTGTTTTCTTCTTGG
GAGGATTGGCATTGTCAGTGTACTATGTGAAGCTGGAACTGAATATCGAT
CCCCATTGGTCGGTGCGAGAGGCATTTAAATGGTGTCCAGAACCCACATA
TTTGCGTCATGAAGTTGGTCCAATCTTTGCACTTGTCAGAGATCTGGGAA
ATCTAATGGGATTGGCTTTGGCCTCGCCACTATATAAGCTGGAAATGAAA
CAATCATCATTTTGGCGGCGATGCCGATTCCTTGGAGTTCTGGAGTTTGT
CAACTATGGATTGCGCTTTTCCACGTTTAAGCAGTCTGGTCGCTTCGTTT
TCTTGACCTATGAGTTCTTAAGAAATGTCATTCATTCCCTAGTACTGATT
AAGTACGTATCGAAATTTTACTAGAATAGAGGCTTTTCTAATTTTGTACA
GATAAAAGAAAATATAAAAAACAATACTGGGACGAAAGTAAAATAAAAAA
AAAAAAAAAAAAAAAAA

FI19814.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:23:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2814532..2815032 822..322 2505 100 Minus
chr2L 23010047 chr2L 2814062..2814315 1194..941 1255 99.6 Minus
chr2L 23010047 chr2L 2815105..2815271 323..157 775 97.6 Minus
chr2L 23010047 chr2L 2815328..2815485 157..1 740 99.4 Minus
chr2L 23010047 chr2L 2814363..2814484 941..820 595 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2814806..2815306 822..322 2505 100 Minus
2L 23513712 2L 2814334..2814589 1196..941 1280 100 Minus
2L 23513712 2L 2815379..2815545 323..157 835 100 Minus
2L 23513712 2L 2815604..2815760 157..1 785 100 Minus
2L 23513712 2L 2814637..2814758 941..820 610 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:23:21 has no hits.

FI19814.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:24:05 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2814062..2814315 941..1194 99 <- Minus
chr2L 2814364..2814482 822..940 99 <- Minus
chr2L 2814533..2815031 323..821 100 <- Minus
chr2L 2815106..2815270 158..322 97 <- Minus
chr2L 2815328..2815485 1..157 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-06 12:50:46 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
CG15400-RB 1..1053 72..1124 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:01:43 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
CG15400-RB 1..1053 72..1124 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:29:30 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
G6P-RB 1..1053 72..1124 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-06 12:50:46 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
CG15400-RB 1..1194 1..1194 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:01:43 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
CG15400-RB 1..1194 1..1194 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:29:30 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
G6P-RB 1..1194 1..1194 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:24:05 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2815604..2815760 1..157 100   Minus
2L 2814336..2814589 941..1194 100 <- Minus
2L 2814638..2814756 822..940 100 <- Minus
2L 2814807..2815305 323..821 100 <- Minus
2L 2815380..2815544 158..322 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:24:05 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2815604..2815760 1..157 100   Minus
2L 2814336..2814589 941..1194 100 <- Minus
2L 2814638..2814756 822..940 100 <- Minus
2L 2814807..2815305 323..821 100 <- Minus
2L 2815380..2815544 158..322 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:24:05 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2815604..2815760 1..157 100   Minus
2L 2814336..2814589 941..1194 100 <- Minus
2L 2814638..2814756 822..940 100 <- Minus
2L 2814807..2815305 323..821 100 <- Minus
2L 2815380..2815544 158..322 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:01:43 Download gff for FI19814.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2814336..2814589 941..1194 100 <- Minus
arm_2L 2814638..2814756 822..940 100 <- Minus
arm_2L 2814807..2815305 323..821 100 <- Minus
arm_2L 2815380..2815544 158..322 100 <- Minus
arm_2L 2815604..2815760 1..157 100   Minus

FI19814.pep Sequence

Translation from 71 to 1123

> FI19814.pep
MESIVHILSDAYHTTLTRELFINEWAQERLSFGRPLWHFLSVHLEPNKMF
NIIIPLCGIFSQEILVHLFTAFTLISTLNSFEKWIYPETRPLWFLREQFA
NNVVVKKPAVALESHQLSCEMTGGLPCAHSMTFTVFVLILASFFFVHCWD
RFAALRSSFCRCIMYLLIIGMVVCMWLSRLYLATEFLHQCILGSYLGIRS
LCTFEGNVKYLFSRPRRYAVSAVFFLGGLALSVYYVKLELNIDPHWSVRE
AFKWCPEPTYLRHEVGPIFALVRDLGNLMGLALASPLYKLEMKQSSFWRR
CRFLGVLEFVNYGLRFSTFKQSGRFVFLTYEFLRNVIHSLVLIKYVSKFY
*

FI19814.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:18:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14918-PA 290 GF14918-PA 1..289 1..289 1062 69.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24489-PA 302 GG24489-PA 1..302 49..350 1326 81.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:18:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH25128-PA 290 GH25128-PA 5..280 4..290 792 52.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:38
Subject Length Description Subject Range Query Range Score Percent Strand
G6P-PB 350 CG15400-PB 1..350 1..350 1863 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:18:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12101-PA 1698 GI12101-PA 1437..1685 33..290 659 52.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:18:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15452-PA 341 GL15452-PA 11..330 10..339 1036 58.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:18:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13703-PA 341 GA13703-PA 11..330 10..339 1036 58.5 Plus
Dpse\GA28800-PA 133 GA28800-PA 12..107 11..122 252 49.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18196-PA 290 GM18196-PA 1..290 1..290 1414 91.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:18:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22801-PA 242 GD22801-PA 1..242 49..290 1194 93.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14148-PA 347 GJ14148-PA 4..342 3..349 924 50.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:18:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24758-PA 241 GK24758-PA 1..241 49..290 722 56.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15022-PA 318 GE15022-PA 1..318 1..350 1391 76 Plus

FI19814.hyp Sequence

Translation from 71 to 1123

> FI19814.hyp
MESIVHILSDAYHTTLTRELFINEWAQERLSFGRPLWHFLSVHLEPNKMF
NIIIPLCGIFSQEILVHLFTAFTLISTLNSFEKWIYPETRPLWFLREQFA
NNVVVKKPAVALESHQLSCEMTGGLPCAHSMTFTVFVLILASFFFVHCWD
RFAALRSSFCRCIMYLLIIGMVVCMWLSRLYLATEFLHQCILGSYLGIRS
LCTFEGNVKYLFSRPRRYAVSAVFFLGGLALSVYYVKLELNIDPHWSVRE
AFKWCPEPTYLRHEVGPIFALVRDLGNLMGLALASPLYKLEMKQSSFWRR
CRFLGVLEFVNYGLRFSTFKQSGRFVFLTYEFLRNVIHSLVLIKYVSKFY
*

FI19814.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
G6P-PB 350 CG15400-PB 1..350 1..350 1863 100 Plus