BDGP Sequence Production Resources |
Search the DGRC for FI19821
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 198 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | run-RB |
Protein status: | FI19821.pep: gold |
Sequenced Size: | 2185 |
2185 bp assembled on 2012-03-22
GenBank Submission: BT133340.1
> FI19821.complete CGACTTTAGCGTGTCGAGAACGCACAGAGAAATATATCGTTTTCGACTTT GGAAAACAGAAACAGGCTCGAAAGAAGCAGAGTTCGAAATCGCGAAACAA TCCAATAACAACAAACAAACGAATTTTTTCCAAGTGACCCCCGATAAAGT GAAGTGCATACCGAGAATCCGCAATAGAAAACCGGCAATTGTCGACAGCC CCAGGATTACGGCTACGATTTCCACATTCGGATACGAGATGCATCTGCCA GCGGGTCCAACGATGGTGGCCAACAACACACAGGTCCTGGCCGCTGCCGC CGCCGCAGCAGCCGCCGCAGCGGCCGCGGTAGCCCAGGGTCCTGGGCCGC AGCAGAGTAGCAATGCCACCACCGCCTCCGCAATCGCCATCAATCCCGCC CAGAGTCTGGCCAACACGAGCACCCACTCGGCCAGCAGCACGGGCAGCTC CACACCAGATCTCAGCACGAACAACACCAGCTCGAGCAGCAACGCCACCA CCAGTCCGCAGAACTCCGCCAAGATGCCCAGCTCGATGACCGACATGTTC GCCAGCCTGCACGAGATGCTGCAGGAGTATCACGGCGAGCTGGCCCAGAC CGGATCGCCCTCGATCCTCTGCAGCGCCCTGCCCAATCACTGGCGGTCGA ACAAGTCGCTGCCCGGAGCCTTCAAGGTGATCGCCCTGGACGACGTGCCC GATGGCACCCTGGTGTCCATCAAGTGCGGCAACGACGAAAACTACTGCGG CGAGCTGAGGAACTGCACCACGACCATGAAGAACCAGGTGGCCAAGTTCA ACGATCTGCGCTTCGTGGGACGATCGGGACGCGGCAAGTCCTTCACGCTG ACCATCACCATTGCCACCTATCCGGTGCAGATCGCCAGCTACAGCAAAGC CATCAAGGTGACCGTCGACGGGCCACGGGAGCCAAGAAGCTATGGCTATC CCCATCCCGGCGCGTTTAACCCGTTCATGCTGAATCCCGCTTGGCTGGAT GCGGCGTACATGACCTACGGCTATGCGGACTACTTCCGCCACCAGGCAGC CGCCCAGGCGGCCCAGGTGCATCATCCGGCACTGGCCAAGTCCTCGGCTT CCTCGGTGTCGCCAAATCCCAATCCATCGGTGGCCACCAGCTCCTCGTCG GCGGTTCAGCCATCTGAGTATCCCCATCCGGCGGCAGCAGTGGCAGCGGC GGCGGGACAACCGGCGGCCATGATGCCATCGCCACCGGGAGCGGCGCCTG CCACGCCCTATGCCATTCCGCAGTTCCCATTCAACCATGTGGCCGCCGCA GCCGCCGCCAAGGCAGCCACGCCACACGCCTTCCATCCGTATAACTTTGC CGCGGCAGCTGGCTTGCGGGCCCGCAATGCTGCCCTGCACCACCAGAGCG AGCCGGTCCACGTCAGCCCCGCCTCCTCCAGGCCCTCCAGCTCCTCGCCC ACCCAGCAACACGTCCTGCTGAAGCTAAACACCTCCATCGAGACGAGCTC CATCCACGAGCAGTCCGCCAGTGACGGCGACTCCGACGACGAGCAGATCG ACGTGGTCAAATCGGAGTTCGACCTGGACAAGAGCCTGGATGTGGCGCCA CTTCGCATGCGCTGCGACCTGAAGGCGCCCTCGGCCATGAAGCCGCTCTA CCACGAGAGCGGTCCTGGAGCGGTAGCCAACAGCCGCCAGCCGTCGCCGG AAACGACCACCAAGATCAAGAGCGCCGCCGTGCAGCAGAAGACCGTGTGG CGGCCCTACTAGGGCATCTGATCCCCAAAAATCTGGAGGAATGAAGAAAA CAAAGTGATATAACAGCGGCGACGCAGAGCGGCAAGCGGGCAAAAATTAT AATTGTGATATAGTGTTATAAGTTACGACGCCTCCGGCCGGCAAACGGAG CAGCCTCATCAGTGGGATAGAAGGATAAACGGCAGCGGGAGCAGCAGCAT CAACTAGCTGAGCAAAAGTTATGGATAGAGGATAATGGATAATGGATATA GGACAAAGGACCCCAATCCTGGAAATCAGACTCCGGCGAAGTTTTATGCT CGGACTCATAAAATCGTGCGACGAGTTTGAATCACAGGCCCTCGATTTTC ACCAGGATTTTTTACAAATCCCAGCAGAAAACACGAAAACTCAAAAACTC AGCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 20561194..20562410 | 939..2155 | 5965 | 99.3 | Plus |
chrX | 22417052 | chrX | 20559838..20560776 | 1..939 | 4665 | 99.8 | Plus |
chrX | 22417052 | chrX | 9180163..9180370 | 615..822 | 290 | 76 | Plus |
chrX | 22417052 | chrX | 20407344..20407436 | 727..819 | 210 | 81.7 | Plus |
chrX | 22417052 | chrX | 20469547..20469620 | 801..728 | 190 | 83.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 20695811..20697037 | 939..2165 | 6120 | 99.9 | Plus |
X | 23542271 | X | 20694455..20695393 | 1..939 | 4695 | 100 | Plus |
X | 23542271 | X | 9288353..9288560 | 615..822 | 290 | 76 | Plus |
X | 23542271 | X | 20541938..20542030 | 727..819 | 210 | 81.7 | Plus |
X | 23542271 | X | 20604130..20604203 | 801..728 | 190 | 83.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6789..6855 | 1899..1964 | 115 | 69.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 20559838..20560775 | 1..938 | 95 | -> | Plus |
chrX | 20561194..20562410 | 939..2155 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
run-RB | 1..1524 | 239..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
run-RB | 1..1524 | 239..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
run-RB | 1..1524 | 239..1762 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
run-RB | 15..2169 | 1..2155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
run-RB | 15..2169 | 1..2155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
run-RB | 17..2171 | 1..2155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20694455..20695392 | 1..938 | 100 | -> | Plus |
X | 20695811..20697027 | 939..2155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20694455..20695392 | 1..938 | 100 | -> | Plus |
X | 20695811..20697027 | 939..2155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 20694455..20695392 | 1..938 | 100 | -> | Plus |
X | 20695811..20697027 | 939..2155 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 20565482..20566419 | 1..938 | 100 | -> | Plus |
arm_X | 20566838..20568054 | 939..2155 | 100 | Plus |
Translation from 0 to 1761
> FI19821.hyp DFSVSRTHREIYRFRLWKTETGSKEAEFEIAKQSNNNKQTNFFQVTPDKV KCIPRIRNRKPAIVDSPRITATISTFGYEMHLPAGPTMVANNTQVLAAAA AAAAAAAAAVAQGPGPQQSSNATTASAIAINPAQSLANTSTHSASSTGSS TPDLSTNNTSSSSNATTSPQNSAKMPSSMTDMFASLHEMLQEYHGELAQT GSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGNDENYCG ELRNCTTTMKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYSKA IKVTVDGPREPRSYGYPHPGAFNPFMLNPAWLDAAYMTYGYADYFRHQAA AQAAQVHHPALAKSSASSVSPNPNPSVATSSSSAVQPSEYPHPAAAVAAA AGQPAAMMPSPPGAAPATPYAIPQFPFNHVAAAAAAKAATPHAFHPYNFA AAAGLRARNAALHHQSEPVHVSPASSRPSSSSPTQQHVLLKLNTSIETSS IHEQSASDGDSDDEQIDVVKSEFDLDKSLDVAPLRMRCDLKAPSAMKPLY HESGPGAVANSRQPSPETTTKIKSAAVQQKTVWRPY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
run-PB | 507 | CG1849-PB | 1..507 | 80..586 | 2615 | 100 | Plus |
run-PC | 510 | CG1849-PC | 1..510 | 80..586 | 2601 | 99.4 | Plus |
run-PA | 510 | CG1849-PA | 1..510 | 80..586 | 2601 | 99.4 | Plus |
RunxB-PC | 663 | CG42267-PC | 34..370 | 117..387 | 576 | 41.1 | Plus |
lz-PA | 826 | CG1689-PA | 153..583 | 61..480 | 574 | 37.2 | Plus |
Translation from 1 to 1761
> FI19821.pep DFSVSRTHREIYRFRLWKTETGSKEAEFEIAKQSNNNKQTNFFQVTPDKV KCIPRIRNRKPAIVDSPRITATISTFGYEMHLPAGPTMVANNTQVLAAAA AAAAAAAAAVAQGPGPQQSSNATTASAIAINPAQSLANTSTHSASSTGSS TPDLSTNNTSSSSNATTSPQNSAKMPSSMTDMFASLHEMLQEYHGELAQT GSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGNDENYCG ELRNCTTTMKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYSKA IKVTVDGPREPRSYGYPHPGAFNPFMLNPAWLDAAYMTYGYADYFRHQAA AQAAQVHHPALAKSSASSVSPNPNPSVATSSSSAVQPSEYPHPAAAVAAA AGQPAAMMPSPPGAAPATPYAIPQFPFNHVAAAAAAKAATPHAFHPYNFA AAAGLRARNAALHHQSEPVHVSPASSRPSSSSPTQQHVLLKLNTSIETSS IHEQSASDGDSDDEQIDVVKSEFDLDKSLDVAPLRMRCDLKAPSAMKPLY HESGPGAVANSRQPSPETTTKIKSAAVQQKTVWRPY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15970-PA | 552 | GF15970-PA | 1..552 | 80..586 | 1640 | 74.1 | Plus |
Dana\GF15967-PA | 684 | GF15967-PA | 129..300 | 189..359 | 562 | 61 | Plus |
Dana\GF15983-PA | 666 | GF15983-PA | 90..225 | 180..313 | 524 | 68.4 | Plus |
Dana\GF21771-PA | 832 | GF21771-PA | 276..398 | 191..313 | 519 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\run-PA | 514 | GG19696-PA | 1..514 | 80..586 | 2592 | 97.5 | Plus |
Dere\GG19691-PA | 671 | GG19691-PA | 126..297 | 189..359 | 562 | 61 | Plus |
Dere\GG17578-PA | 757 | GG17578-PA | 191..326 | 180..313 | 525 | 68.4 | Plus |
Dere\GG18309-PA | 837 | GG18309-PA | 299..421 | 191..313 | 510 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17740-PA | 563 | GH17740-PA | 1..563 | 80..586 | 1431 | 64.5 | Plus |
Dgri\GH17737-PA | 268 | GH17737-PA | 111..261 | 189..336 | 558 | 67.8 | Plus |
Dgri\GH17774-PA | 232 | GH17774-PA | 91..226 | 180..313 | 522 | 68.4 | Plus |
Dgri\GH11831-PA | 344 | GH11831-PA | 96..183 | 186..273 | 324 | 67 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
run-PB | 507 | CG1849-PB | 1..507 | 80..586 | 2615 | 100 | Plus |
run-PC | 510 | CG1849-PC | 1..510 | 80..586 | 2601 | 99.4 | Plus |
run-PA | 510 | CG1849-PA | 1..510 | 80..586 | 2601 | 99.4 | Plus |
RunxB-PC | 663 | CG42267-PC | 34..370 | 117..387 | 576 | 41.1 | Plus |
lz-PA | 826 | CG1689-PA | 153..583 | 61..480 | 574 | 37.2 | Plus |
RunxA-PB | 646 | CG34145-PB | 6..215 | 119..313 | 550 | 54.3 | Plus |
RunxA-PC | 651 | CG34145-PC | 6..215 | 119..313 | 550 | 54.3 | Plus |
RunxA-PD | 663 | CG34145-PD | 6..215 | 119..313 | 550 | 54.3 | Plus |
lz-PB | 705 | CG1689-PB | 153..465 | 61..385 | 545 | 42.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15491-PA | 578 | GI15491-PA | 1..578 | 80..586 | 1445 | 63.2 | Plus |
Dmoj\GI15119-PA | 513 | GI15119-PA | 87..222 | 180..313 | 522 | 68.4 | Plus |
Dmoj\GI14398-PA | 752 | GI14398-PA | 182..314 | 188..320 | 520 | 72.9 | Plus |
Dmoj\GI15484-PA | 199 | GI15484-PA | 105..195 | 189..279 | 393 | 72.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15806-PA | 561 | GL15806-PA | 1..561 | 80..586 | 1517 | 65.4 | Plus |
Dper\GL15800-PA | 290 | GL15800-PA | 111..261 | 189..336 | 558 | 67.8 | Plus |
Dper\GL15927-PA | 635 | GL15927-PA | 69..204 | 180..313 | 525 | 68.4 | Plus |
Dper\GL16499-PA | 867 | GL16499-PA | 266..388 | 191..313 | 516 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\run-PA | 558 | GA14956-PA | 1..558 | 80..586 | 1542 | 69.1 | Plus |
Dpse\GA13742-PA | 301 | GA13742-PA | 126..276 | 189..336 | 559 | 67.8 | Plus |
Dpse\GA25684-PA | 569 | GA25684-PA | 3..138 | 180..313 | 524 | 68.4 | Plus |
Dpse\GA22609-PA | 868 | GA22609-PA | 275..397 | 191..313 | 516 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23050-PA | 510 | GM23050-PA | 1..510 | 80..586 | 2636 | 98.8 | Plus |
Dsec\GM23044-PA | 293 | GM23044-PA | 99..242 | 189..329 | 561 | 69.7 | Plus |
Dsec\GM22662-PA | 535 | GM22662-PA | 361..516 | 180..325 | 523 | 62.2 | Plus |
Dsec\GM22478-PA | 816 | GM22478-PA | 278..400 | 191..313 | 512 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\run-PA | 510 | GD17500-PA | 1..510 | 80..586 | 2632 | 98.6 | Plus |
Dsim\GD17495-PA | 657 | GD17495-PA | 113..284 | 189..359 | 564 | 61 | Plus |
Dsim\GD16951-PA | 331 | GD16951-PA | 74..196 | 198..320 | 485 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\run-PA | 542 | GJ19252-PA | 1..542 | 80..586 | 1480 | 66.8 | Plus |
Dvir\GJ19245-PA | 307 | GJ19245-PA | 120..270 | 189..336 | 560 | 67.8 | Plus |
Dvir\GJ18917-PA | 531 | GJ18917-PA | 83..218 | 180..313 | 526 | 68.4 | Plus |
Dvir\GJ18742-PA | 655 | GJ18742-PA | 104..229 | 188..313 | 521 | 75.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19815-PA | 510 | GK19815-PA | 122..416 | 173..431 | 984 | 70 | Plus |
Dwil\GK19810-PA | 259 | GK19810-PA | 102..252 | 189..336 | 560 | 67.8 | Plus |
Dwil\GK20052-PA | 277 | GK20052-PA | 88..223 | 180..313 | 523 | 68.4 | Plus |
Dwil\GK25373-PA | 689 | GK25373-PA | 135..272 | 192..329 | 522 | 71 | Plus |
Dwil\GK19815-PA | 510 | GK19815-PA | 415..510 | 508..586 | 277 | 63.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\run-PA | 520 | GE17894-PA | 1..520 | 80..586 | 2593 | 96.7 | Plus |
Dyak\GE17890-PA | 699 | GE17890-PA | 119..290 | 189..359 | 563 | 61 | Plus |
Dyak\GE15340-PA | 378 | GE15340-PA | 205..340 | 180..313 | 517 | 68.4 | Plus |
Dyak\GE17788-PA | 832 | GE17788-PA | 283..405 | 191..313 | 509 | 75.6 | Plus |