Clone FI19823 Report

Search the DGRC for FI19823

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:198
Well:23
Vector:pOT2
Associated Gene/TranscriptCG2144-RA
Protein status:FI19823.pep: gold
Sequenced Size:2919

Clone Sequence Records

FI19823.complete Sequence

2919 bp assembled on 2012-12-18

GenBank Submission: BT149886.1

> FI19823.complete
ATTTGACTTCCAGCTGACGGGCGGCAATTATATTGAATTTGTTGTGGTTT
TCGGTGGAGCGCGGTACTTTCGATGAAAACAAGAAGATGGAACAGCACAA
AAGTTGGCTGGTCTATACCATCGGCATGCTCACGGCGTTCCTTTGCGGCG
CCGTGCTCTTTCTGATTGGCTTCTTTCCGGCCTCCTACTCGGTGGCGGAG
AAGGAAAGCACCGTGCCAGAGGGCCGGCCCACCGCTCTGCTTGGCATGGA
ACTGACGCCGCCGCCACCTGCCTATGACTCCTTTGTGCTGTTACTGGTCG
ACGCGTTGCGCGATGATTTTCCCGATGCCACGTCTATGCCGGTGGCTTAT
TCTAGGGCCTGCGAGAAGCTTAAGCTCCATGTGGACATACCGACGGTGAC
TATGCCACGCTTGAAGAGCATCACCACCGGCACCCTTTCGAACTTTATCG
ACATTGCGCTAAACGTGGGTCATACGGAGCAGATGCAGGACTCGTTCTTG
CACCGGCTAAAACAGCAGAATCGAGTTGTTTCCTTTGCCGGCGACCACAC
CTGGGTGAAGCTCTTTCCCAGCGAGTTTACACGGCAGGTCGAGAACCATG
ATTCCTTTTATGTTAACGACTTCTACGAGGGCGATAGAAATGTGACCAAA
ACGCTGGAGACTGAGTTGGAGCGGAGTGACTGGTCTTTGCTGATTTTACA
CTATCTGGGCCTCGATCACATTGGTCATGTCGAGGGCAATGCCAGCCCTA
GGGTGCCCCTAAAGCTAAAGGAAATGGATGAGGTGGTGAAAAAAATATTG
GATCATAAGAGTTTTCCCAACGTTCTGCTTATGCTGACTGGAGATCATGG
CATGGCTGATGGCGGAGGACATGGCGGCAATACGCCAGCCGAAACTCTGG
TACCTTTATATTTGTATTACAACAACTGCAGCAAAACACCATCCGCCTCA
AAACGGTACAACCAAATCGATTTGGCGCCCACCCTTTCAGTGCTTCTGTC
TGTTGAAATACCCACGCTCTCCATTGGCTGCCTAATACCGGAGATGCTGC
AATCGCTGTCTTTGGAGCACCAGTTGTATGCTTACTTCTACAACGCCCAC
CACTTGCTCAACAAGGCGCGAGTGAAGTTCGGCCACGAAATAGTCCATCG
GAGTGATTACTACACCTGGTATCAGAATGCCACCCTGTTACACAAGAAGC
TGCTGCGCCCTTTAAGAGAAGGCGATGGAGGTGGAGCTAGTCAGGTTTAC
TACCAGAACGCCAAGCTTAATTATATGCGCGTGGCTCGCGAGATTTCTGA
TCTGCTCTCCGAATCCCTGGTGAAGTTCGACTATGGATTTATTGCCGTTG
GATTAGCTTTGACCACATCGACATCCCTTCATATTGTGATCAGCGTCTTG
TACTTGGATCTCACCGAACAGCTTCAGCTGGACGGATTAAAAGTGGGGCA
ACTGTGGCTCTCTGTGATTGCTGCTGTCGTCTTAAATTATACTAGTCATG
CATTGGACATCATCATGACCAGTTCAACGCTTTACAGCATTCTCCTATTG
GTACCCATCTCGATCGCTGTTTACCTTACAATCGACGTGGCGCAGGCGCT
GCTCAAGATTGCATTGCCTCCGCTATACACGCGTCGCCTGAAGATTTCCA
TTCCATTGCCGCTACCTCTGCTAGCTTGTTATGCTATACGCACTTTAACT
CTTGGTTCCTCCTCGTTTATTGAATTCGAGTATAATACATGGTATTACCT
GGGCAATACCCTCATCCTATTGACGGCATTCCGAACGCTGCGATGGCGCA
TCACCAAAACCAACGTGGAACTAAATGGCCGTCATCTGTACACGATTGCA
TCGACCTGTCTGTGGCAAATGCGTAAAGTGCTTGTGGTGCTTATGCTGCT
CACATTGATGCGCTACATCCACAGGCTGCAGGCTATCCGGAGCACCGTCG
TCATATTTTCGATGCTGTTGCTCTGGGCACGCCTCCATCGTCACAGCCAG
TTGCCGCAGTCGTTGGCCAGTGGAGCAGCTTTATTCATGGTTTACTGCTT
CCGAGGGCTAAACGGCCAGGTGCTTTTCTTCGACGTGCCTTCGCACATGG
CTGCAAAACTTATGGTGCCGACGCTGGTGATCTTCTGGTGCTGTTTGGCC
CTTGTTTTGATGCTGGGCTATCGGGCGGCACTGCCTCAAGCGCACAGCTT
TGGGAAGGTGCCGCCCACAGGTGCATTATTGCAGTTGCTGCAGACGAACC
TTACCAGCTCGCTGCTGTTGGCTGCACTTTTGCAACGGGTCCACAACATC
TTACTACTACCCGTACTTCTCGTGGCCCTGCAGCAAACGTACAAGCTGTG
CGATGTCTACGGCACCAGTGCCCGAAAGTTCTCCGTGCGATTGGTGCATG
TGTACAAGATCATCATGACCATATTCCTGGCCAGGATGTTCTTCTTCTAC
CAGGGTAACTCGAACAGCCTGTCCACCATTGACCTAACGCCTGGTTATAT
CGGACAGACAAACTACAACCCGTCGATCGTTGCCATCTTTGTCACCCTCA
ACACGTACAGTGCGGATATTCATGCATTCCTCTATTTAGTTGTCCACACC
CTGCGCTCGGATCTGCGCAGTGTGGGTATCATGCAGCTACATCCTCCGTA
CTCGATAGCCGCGGATTCGCTGATAGCTCCGCTCTACGCCGCGCTAATCA
TGTTGCCGGCGGCCTTCTACCTCTGCCTCTTGGTTGGCTTCCGCTACCAC
CTCTTTATCTACTCCGTGTTTTCCCCAAAAGTACTTTACGACTGTTACAC
TGTGCTGGTGTTCTATTTGGTATTTTTAGTAACGAGTTTGTACTTTAAAT
TGTTTAAACATGACGCTTAAAAAGAAATAATTTAAAAACGCTTAAGCTAT
TAAAAAAAAAAAAAAAAAA

FI19823.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 3409092..3409891 2102..2901 4000 100 Plus
chr2R 21145070 chr2R 3408300..3409031 1370..2101 3645 99.9 Plus
chr2R 21145070 chr2R 3406951..3407509 251..809 2780 99.8 Plus
chr2R 21145070 chr2R 3406638..3406887 1..250 1235 99.6 Plus
chr2R 21145070 chr2R 3407761..3407975 941..1155 1075 100 Plus
chr2R 21145070 chr2R 3408033..3408248 1155..1370 1065 99.5 Plus
chr2R 21145070 chr2R 3407569..3407714 808..953 670 97.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:04:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7521742..7522542 2102..2902 4005 100 Plus
2R 25286936 2R 7520950..7521681 1370..2101 3660 100 Plus
2R 25286936 2R 7519601..7520159 251..809 2795 100 Plus
2R 25286936 2R 7519288..7519537 1..250 1250 100 Plus
2R 25286936 2R 7520683..7520898 1155..1370 1080 100 Plus
2R 25286936 2R 7520411..7520625 941..1155 1075 100 Plus
2R 25286936 2R 7520219..7520364 808..953 670 97.3 Plus
Blast to na_te.dros performed on 2019-03-15 14:04:50 has no hits.

FI19823.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:05:46 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 3406638..3406887 1..250 99 -> Plus
chr2R 3406951..3407509 251..809 99 -> Plus
chr2R 3407571..3407701 810..940 100 -> Plus
chr2R 3407761..3407975 941..1155 100 -> Plus
chr2R 3408034..3408248 1156..1370 99 -> Plus
chr2R 3408301..3409031 1371..2101 99 -> Plus
chr2R 3409092..3409891 2102..2901 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-01-07 15:40:56 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
CG2144-RA 1..2784 87..2870 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:17:25 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
CG2144-RA 1..2784 87..2870 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:49:29 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
CG2144-RA 1..2784 87..2870 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-07 15:40:56 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
CG2144-RA 9..2909 1..2901 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:17:25 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
CG2144-RA 9..2909 1..2901 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:49:29 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
CG2144-RA 9..2909 1..2901 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:46 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7519288..7519537 1..250 100 -> Plus
2R 7519601..7520159 251..809 100 -> Plus
2R 7520221..7520351 810..940 100 -> Plus
2R 7520411..7520625 941..1155 100 -> Plus
2R 7520684..7520898 1156..1370 100 -> Plus
2R 7520951..7521681 1371..2101 100 -> Plus
2R 7521742..7522541 2102..2901 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:46 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7519288..7519537 1..250 100 -> Plus
2R 7519601..7520159 251..809 100 -> Plus
2R 7520221..7520351 810..940 100 -> Plus
2R 7520411..7520625 941..1155 100 -> Plus
2R 7520684..7520898 1156..1370 100 -> Plus
2R 7520951..7521681 1371..2101 100 -> Plus
2R 7521742..7522541 2102..2901 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:05:46 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7519288..7519537 1..250 100 -> Plus
2R 7519601..7520159 251..809 100 -> Plus
2R 7520221..7520351 810..940 100 -> Plus
2R 7520411..7520625 941..1155 100 -> Plus
2R 7520684..7520898 1156..1370 100 -> Plus
2R 7520951..7521681 1371..2101 100 -> Plus
2R 7521742..7522541 2102..2901 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:17:25 Download gff for FI19823.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3406793..3407042 1..250 100 -> Plus
arm_2R 3407106..3407664 251..809 100 -> Plus
arm_2R 3407726..3407856 810..940 100 -> Plus
arm_2R 3407916..3408130 941..1155 100 -> Plus
arm_2R 3408189..3408403 1156..1370 100 -> Plus
arm_2R 3408456..3409186 1371..2101 100 -> Plus
arm_2R 3409247..3410046 2102..2901 100   Plus

FI19823.hyp Sequence

Translation from 86 to 2869

> FI19823.hyp
MEQHKSWLVYTIGMLTAFLCGAVLFLIGFFPASYSVAEKESTVPEGRPTA
LLGMELTPPPPAYDSFVLLLVDALRDDFPDATSMPVAYSRACEKLKLHVD
IPTVTMPRLKSITTGTLSNFIDIALNVGHTEQMQDSFLHRLKQQNRVVSF
AGDHTWVKLFPSEFTRQVENHDSFYVNDFYEGDRNVTKTLETELERSDWS
LLILHYLGLDHIGHVEGNASPRVPLKLKEMDEVVKKILDHKSFPNVLLML
TGDHGMADGGGHGGNTPAETLVPLYLYYNNCSKTPSASKRYNQIDLAPTL
SVLLSVEIPTLSIGCLIPEMLQSLSLEHQLYAYFYNAHHLLNKARVKFGH
EIVHRSDYYTWYQNATLLHKKLLRPLREGDGGGASQVYYQNAKLNYMRVA
REISDLLSESLVKFDYGFIAVGLALTTSTSLHIVISVLYLDLTEQLQLDG
LKVGQLWLSVIAAVVLNYTSHALDIIMTSSTLYSILLLVPISIAVYLTID
VAQALLKIALPPLYTRRLKISIPLPLPLLACYAIRTLTLGSSSFIEFEYN
TWYYLGNTLILLTAFRTLRWRITKTNVELNGRHLYTIASTCLWQMRKVLV
VLMLLTLMRYIHRLQAIRSTVVIFSMLLLWARLHRHSQLPQSLASGAALF
MVYCFRGLNGQVLFFDVPSHMAAKLMVPTLVIFWCCLALVLMLGYRAALP
QAHSFGKVPPTGALLQLLQTNLTSSLLLAALLQRVHNILLLPVLLVALQQ
TYKLCDVYGTSARKFSVRLVHVYKIIMTIFLARMFFFYQGNSNSLSTIDL
TPGYIGQTNYNPSIVAIFVTLNTYSADIHAFLYLVVHTLRSDLRSVGIMQ
LHPPYSIAADSLIAPLYAALIMLPAAFYLCLLVGFRYHLFIYSVFSPKVL
YDCYTVLVFYLVFLVTSLYFKLFKHDA*

FI19823.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG2144-PA 927 CG2144-PA 1..927 1..927 4769 100 Plus
CG12263-PA 1077 CG12263-PA 74..636 61..614 404 27 Plus

FI19823.pep Sequence

Translation from 86 to 2869

> FI19823.pep
MEQHKSWLVYTIGMLTAFLCGAVLFLIGFFPASYSVAEKESTVPEGRPTA
LLGMELTPPPPAYDSFVLLLVDALRDDFPDATSMPVAYSRACEKLKLHVD
IPTVTMPRLKSITTGTLSNFIDIALNVGHTEQMQDSFLHRLKQQNRVVSF
AGDHTWVKLFPSEFTRQVENHDSFYVNDFYEGDRNVTKTLETELERSDWS
LLILHYLGLDHIGHVEGNASPRVPLKLKEMDEVVKKILDHKSFPNVLLML
TGDHGMADGGGHGGNTPAETLVPLYLYYNNCSKTPSASKRYNQIDLAPTL
SVLLSVEIPTLSIGCLIPEMLQSLSLEHQLYAYFYNAHHLLNKARVKFGH
EIVHRSDYYTWYQNATLLHKKLLRPLREGDGGGASQVYYQNAKLNYMRVA
REISDLLSESLVKFDYGFIAVGLALTTSTSLHIVISVLYLDLTEQLQLDG
LKVGQLWLSVIAAVVLNYTSHALDIIMTSSTLYSILLLVPISIAVYLTID
VAQALLKIALPPLYTRRLKISIPLPLPLLACYAIRTLTLGSSSFIEFEYN
TWYYLGNTLILLTAFRTLRWRITKTNVELNGRHLYTIASTCLWQMRKVLV
VLMLLTLMRYIHRLQAIRSTVVIFSMLLLWARLHRHSQLPQSLASGAALF
MVYCFRGLNGQVLFFDVPSHMAAKLMVPTLVIFWCCLALVLMLGYRAALP
QAHSFGKVPPTGALLQLLQTNLTSSLLLAALLQRVHNILLLPVLLVALQQ
TYKLCDVYGTSARKFSVRLVHVYKIIMTIFLARMFFFYQGNSNSLSTIDL
TPGYIGQTNYNPSIVAIFVTLNTYSADIHAFLYLVVHTLRSDLRSVGIMQ
LHPPYSIAADSLIAPLYAALIMLPAAFYLCLLVGFRYHLFIYSVFSPKVL
YDCYTVLVFYLVFLVTSLYFKLFKHDA*

FI19823.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:07:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11202-PA 926 GF11202-PA 1..926 1..927 3903 81.1 Plus
Dana\GF12178-PA 1080 GF12178-PA 74..383 61..335 416 32.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:08:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23283-PA 927 GG23283-PA 1..927 1..927 4458 94.9 Plus
Dere\GG21894-PA 1077 GG21894-PA 74..390 61..343 416 33.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:08:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22081-PA 932 GH22081-PA 1..932 1..927 3661 74.4 Plus
Dgri\GH21674-PA 1081 GH21674-PA 76..393 61..343 407 32.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:45:14
Subject Length Description Subject Range Query Range Score Percent Strand
PIG-G-PA 927 CG2144-PA 1..927 1..927 4769 100 Plus
PIG-O-PA 1077 CG12263-PA 74..636 61..614 404 27 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20449-PA 923 GI20449-PA 1..923 1..927 3444 71.7 Plus
Dmoj\GI20127-PA 1088 GI20127-PA 76..388 61..336 410 32.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:08:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20012-PA 930 GL20012-PA 1..930 1..927 3822 79 Plus
Dper\GL17777-PA 1082 GL17777-PA 74..384 61..336 394 31.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:08:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15265-PA 930 GA15265-PA 1..930 1..927 3832 79.5 Plus
Dpse\GA11517-PA 1082 GA11517-PA 74..384 61..336 394 31.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:08:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20960-PA 807 GM20960-PA 1..551 1..551 2848 96.7 Plus
Dsec\GM20960-PA 807 GM20960-PA 528..807 649..927 1202 91.4 Plus
Dsec\GM21886-PA 1060 GM21886-PA 74..373 61..343 328 31.1 Plus
Dsec\GM20556-PA 894 GM20556-PA 151..360 162..343 178 29.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:08:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10486-PA 927 GD10486-PA 1..927 1..927 4829 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22298-PA 931 GJ22298-PA 1..931 1..927 3585 73.7 Plus
Dvir\GJ19897-PA 1085 GJ19897-PA 76..393 61..343 409 32.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10685-PA 935 GK10685-PA 1..933 1..925 3305 68 Plus
Dwil\GK22996-PA 1078 GK22996-PA 76..393 61..343 400 32.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19130-PA 927 GE19130-PA 1..927 1..927 4357 94.1 Plus
Dyak\GE11970-PA 1077 GE11970-PA 74..390 61..343 413 32.9 Plus