Clone FI19824 Report

Clone Sequence Records

FI19824.complete Sequence

3421 bp assembled on 2012-04-09

GenBank Submission: BT133388.1

> FI19824.complete
TTTTCGTCGCTGCTGCCAATATTTTGACGTTCATACCGTTTGCGTATTTC
GCAGAGACCAGTTAACGCGCTCGTAAAATCGCAAAAAAACACACTTAACG
CGATCGTTTGTTCTGTTTTTGTAAACACATTGCAATTGGCCTGCATTTTG
CATAATTTACGCAACGAAGGCAACTGCGTGAGTGCACCAACACACACACA
CACACACACAGCCGTGCAAAAGAGAGCCAAAGAGAGTGAGGAGCGCAGGC
GAGTTGGCAGCCAAAGGCAAAAAATCAAAGTCTATCGAAAAAAACACTAT
AAAAATAGATCAAAATGACGCGCTTGAAACATTTCTCAGCATAGAACGAC
TATCAATCGAATTAAGTTTTAAGTAATACCCAACGACCGTGGAAAAACCA
AGCACAGTGCCAAAGCAACGCATCGACGCATAAACGCTAGTTAATAATAA
AAGTGCATAAAATTATTCGTATTCCAACCATCTTCCGTCATCTAAAGTGC
TAAAAATTCGTCACCATGTCGCGTTCAAGTAGTTTGTTTTTTAATTCGGC
TGCCAAGTTAGAGACTAAAAAACTTAATTGATTCGATCAAGAAAAGTGAG
CAACCAGCAGTGAAAATACACAACAGCAGCATAATCACTTTCGAAACCAG
TTTTTTCGTAAAGAATCGCGAAGAGTGTTCCAGAAAAGTGCAACATCACA
TTCCCACACAGTATATGCACACACACACAAACACACTATATATACATATA
GGTACATATATAGCAACATCGGAGCATCCAGGGAAACGACCCACAGCACC
CACTTCGGTTAATCTCGCTTGGTAATTAAGGGTTCATCGCCTAATGGCAA
GTTCGCTCAACAAGACGAGACACAGGCGCAGACTGGCTGCGATCTCGTTC
CTATCGAATATCTCGTTAGATGGCACCCATCGGGACACCAAATTCGGCGC
AACATTCGGCAGCAGCCTGCTCTGCAACCAGAATAAGAACCCATCCTCGC
TGGGACTCGGCTCGGGGGGCTTTCATCCGCACTATCAGCAGCACCACCAT
CAGCGCAGCCACTCGGCGACGCACCACAACCACCAGAAGCGGCATCACAC
GCAGCAGCAGCAGCAACAGCAACAACAGCAACACACCCAACAGCAGCAGC
AGCAGCAGCAACATCAGCAGCAGCATCAGCAGCAGCAGCAACACCAGAAT
GGCGCCCTCTGTTCGCCGCTCCTCTGCAGCGCCGATGTCCACATGGGCAT
CGATGGCGGCATCGGGCTGGGATTGGGACTGGAGGACTGCACCACCGGTG
CCAGCGATGGGGACGGGCATTTTAGTGAAACTGAAAATATGGGTCAATAC
CTGATGAACGTCCTGCCGGCCGCCGATCACAATCGCAGCAGCATTGTGCC
GGCCGAGAGACGCAACATAAAGCGCCCGACCTCGTCGGGTCGTCATAACC
ACCAGGCACCGGGCAATGGCAATATGGGCAATAAGCTCCAACAGCAGCAG
CAGCAGCAGCACAAGTTGCAGCAGCAACAGCGGCAGGCACGAAGTTGCGC
CGCCGGCAGCGGAGGATCGGGTGCCGAGAGTGGCAGCGATTCGGACAGCG
TCAAGATACCGCTCAAGGTGTCCAATCTGGGCAGCGGCGGTGGCGTGGCC
GGCGGAGCGGGCAGCAAGCTATTGCCGCTGAGGGAACGCACCTTCAGCAA
TGGGGCAAGCGATCAGAACTTGCAGCCGGAGCGGAGGGCACGTTTGAACA
CGGCGCCGGGTATGCGGGTGGGCTCCAATTCGAGCATTGCCATGGGCGGC
GGTCTGAAGCGCACCTATGTCTTGAGTGGATCGAGCGTTAGCCACATCAC
CGACGACAGCAGCACGGAGAGCCTGACTCCGGCGGGAAACTATGCGGGCA
GTTTCCGGAACAGCCTCAGCAAGTCGGTCCAGATCAGCGATAGCCGGCGT
GGAACCTCCGGCCAGCCATTGGGACTTGGACAGGCACGGGATGAGCGAAT
GGTGCTTGTGTCGCGCAAGATTCCGTTCTTCATATTCTCTTCACTTCCCT
ATTACAAGGGCAAGAATGGAAGAGCTGAGTTTCGCAAGGAGGATCGTCGT
CGTCGGAATCCATCCACTTCGCGTCCTTTGAGCTCGATCAACGATGCGCC
ATTCGATCCGTTTGATTTGCTGGGTATACAGAAGGCCGAAAGTGGTCAGG
ACATATCATATGGTCACCTGCTGATACCTTCACGTCAGTACGAAAAGGAG
CGCAAGAAGCATGGCAATGCATCGGCGAATCCTTCCATCTTTGAGAACCA
AATGGAGATCACGAGCACAGCGGCGCTTAAGAATCATGGCATTGCGAGGT
GCTTCACTTATGAGAACAACAATCGCAATAGTGCAACCAGTCCGACGCCA
GACATGAAACTGGATATGGACATAGAGAGTGTTATCCTGGGCGGAGACTC
GTCGCGTGGTCAGGTGTACTCCGCTAGCATTTTGGACGATCCGGAGTTGA
TTGCCGGAAAGCATCGCACGTTGCTTACCTTCACCTCTTACATGACCTCG
GTCATTGACTATGTGCGTCCATCCGATCTTAAGAAGGAGCTGAACGATAA
GTTTCGCGAGAAGTTCCCCACCATCCAGCTCACACTGAGTAAGCTGAGGA
GCATTAAGCGCGAAATGCGCCGAATCAACAAGTTGGACTCGCGCATCGAT
CTGGTGACCATATCGCAGGCGTACGTGTACTTCGAGAAGCTCATCCTGGC
CAATCTGATTAACAAGAGCAACCGCAAGCTGTGCGCCGGCGCCTGTCTGC
TGCTCAGCGCCAAGATGAATGACGTGAAGGGTGACGCACTCAAGAGCCTC
ATCGAGAAGACGGAGAGCGTGTTCCGGTTGAATCGCAAGGAGCTGATCTC
GTCGGAGTTCGCTGTGCTTGTGGCTCTGGAGTTTAGCCTGCATGTAAACC
GGCACGAGGTCCTGCCACACTATCAGCGGCTGCTCTACGAGTCCTAGGAC
TGGCCCAAGCGCTGCGCCGAGAAGAGTTTCCTGGCGGCAGCGCAGGCGGT
ACAGCAATTGTGTCGCAAGGGCAGTCGCAAGTAGGCGTTCGTACTTATAG
CATACTTTCGGGTGTTGGGTTTTCAACGATCGTATTGATAATATTCACCA
CCCTCATGACCTCCCTAACCTGGTTTTGACCTAGAAAGTCTTAGTTTTAA
AATTCATTAGAATAATCAAATAAATAATAATTACTATGTTATATCAACTA
TTATAATTCTCCCTATCATTTTTAGGATTAAAAATCTGTTAGTCTTAAGT
AACCAAGACACATTGTAAAATAAAATAATTTAAGCAGATCAAATTAAGTT
GCCGCATGGGTAACAGTGCGTTGATCAAATAATAAAAACATCATCGTAAA
ATAAAAAAAAAAAAAAAAAAA

FI19824.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:34:01

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chr2R	21145070	chr2R	9477901..9479180	1688..409	6400	100	Minus
chr2R	21145070	chr2R	9467887..9468639	3402..2650	3765	100	Minus
chr2R	21145070	chr2R	9480195..9480602	409..1	1995	99.8	Minus
chr2R	21145070	chr2R	9470500..9470884	2072..1688	1925	100	Minus
chrX	22417052	chrX	17320826..17321082	3399..3143	1285	100	Minus
chr2R	21145070	chr2R	15666859..15667114	3146..3401	1280	100	Plus
chrX	22417052	chrX	4685221..4685476	3401..3146	1280	100	Minus
chrX	22417052	chrX	7372787..7373042	3401..3146	1280	100	Minus
chr3R	27901430	chr3R	24078508..24078763	3146..3401	1280	100	Plus
chr3R	27901430	chr3R	25230278..25230533	3146..3401	1280	100	Plus
chr3L	24539361	chr3L	3474618..3474873	3146..3401	1280	100	Plus
chr2L	23010047	chr2L	1618183..1618438	3399..3144	1280	100	Minus
chr2R	21145070	chr2R	18247074..18247328	3146..3400	1275	100	Plus
chrX	22417052	chrX	20951374..20951628	3400..3146	1275	100	Minus
chr2L	23010047	chr2L	4917340..4917594	3400..3146	1275	100	Minus
chr2R	21145070	chr2R	13932861..13933114	3146..3399	1270	100	Plus
chr2R	21145070	chr2R	18236332..18236585	3399..3146	1270	100	Minus
chrX	22417052	chrX	8814155..8814408	3146..3399	1270	100	Plus
chrX	22417052	chrX	9401093..9401346	3146..3399	1270	100	Plus
chrX	22417052	chrX	21965777..21966030	3146..3399	1270	100	Plus
chr3L	24539361	chr3L	5530400..5530653	3399..3146	1270	100	Minus
chr3L	24539361	chr3L	11323477..11323730	3146..3399	1270	100	Plus
chr3L	24539361	chr3L	12865370..12865623	3399..3146	1270	100	Minus
chr3L	24539361	chr3L	15889327..15889580	3146..3399	1270	100	Plus
chr3L	24539361	chr3L	18998494..18998747	3146..3399	1270	100	Plus
chr2L	23010047	chr2L	13480196..13480449	3399..3146	1270	100	Minus
chrU	10048995	chrU	6623747..6624000	3146..3399	1270	100	Plus
chrU	10048995	chrU	9551245..9551498	3399..3146	1270	100	Minus
chr4	1351717	chr4	435398..435651	3399..3146	1270	100	Minus
chr3LHet	2555433	chr3LHet	57186..57439	3399..3146	1270	100	Minus
chr2R	21145070	chr2R	8711539..8711794	3146..3401	1265	99.6	Plus
chr2R	21145070	chr2R	14245554..14245809	3401..3146	1265	99.6	Minus
chrX	22417052	chrX	4624724..4624979	3401..3146	1265	99.6	Minus
chrX	22417052	chrX	16825737..16825989	3146..3398	1265	100	Plus
chrX	22417052	chrX	19360973..19361228	3401..3146	1265	99.6	Minus
chr3R	27901430	chr3R	2340575..2340830	3146..3401	1265	99.6	Plus
chr3R	27901430	chr3R	24125121..24125376	3401..3146	1265	99.6	Minus
chr3R	27901430	chr3R	24620676..24620931	3146..3401	1265	99.6	Plus
chr3R	27901430	chr3R	25142634..25142886	3147..3399	1265	100	Plus
chr3L	24539361	chr3L	9211247..9211502	3401..3146	1265	99.6	Minus
chr2L	23010047	chr2L	20890162..20890417	3401..3146	1265	99.6	Minus
chr3L	24539361	chr3L	9563849..9564103	3401..3147	1260	99.6	Minus
chr2R	21145070	chr2R	18412385..18412635	3396..3146	1255	100	Minus
chrX	22417052	chrX	13292320..13292570	3145..3395	1255	100	Plus
chr3R	27901430	chr3R	9342419..9342669	3396..3146	1255	100	Minus
chr3R	27901430	chr3R	22465911..22466164	3146..3399	1255	99.6	Plus
chr3L	24539361	chr3L	939649..939902	3399..3146	1255	99.6	Minus
chr3L	24539361	chr3L	16483808..16484058	3396..3146	1255	100	Minus
chr2L	23010047	chr2L	52271..52527	3146..3402	1255	99.2	Plus
chr2L	23010047	chr2L	9392507..9392757	3396..3146	1255	100	Minus
chr2R	21145070	chr2R	18661631..18661880	3146..3395	1250	100	Plus
chrX	22417052	chrX	1416787..1417036	3146..3395	1250	100	Plus
chrX	22417052	chrX	1417055..1417304	3395..3146	1250	100	Minus
chrX	22417052	chrX	5231364..5231613	3395..3146	1250	100	Minus
chr3R	27901430	chr3R	10072472..10072721	3146..3395	1250	100	Plus
chr2L	23010047	chr2L	14888784..14889033	3395..3146	1250	100	Minus
chr2R	21145070	chr2R	13034491..13034739	3394..3146	1245	100	Minus
chrX	22417052	chrX	13321129..13321377	3146..3394	1245	100	Plus
chr3R	27901430	chr3R	25475733..25475984	3395..3144	1245	99.6	Minus
chr3R	27901430	chr3R	26303066..26303314	3394..3146	1245	100	Minus
chr3L	24539361	chr3L	5994399..5994647	3394..3146	1245	100	Minus
chrX	22417052	chrX	4593269..4593519	3396..3146	1240	99.6	Minus
chr3L	24539361	chr3L	9567817..9568064	3393..3146	1240	100	Minus
chr2L	23010047	chr2L	19619322..19619575	3146..3399	1240	99.2	Plus
chr2R	21145070	chr2R	13164388..13164640	3146..3398	1235	99.2	Plus
chr2R	21145070	chr2R	6907500..6907748	3394..3146	1230	99.6	Minus
chrU	10048995	chrU	8001430..8001678	3394..3146	1230	99.6	Minus
chrU	10048995	chrU	9564107..9564358	3148..3399	1230	99.2	Plus
chr4	1351717	chr4	434610..434858	3394..3146	1230	99.6	Minus
chr2R	21145070	chr2R	3127993..3128240	3146..3393	1225	99.6	Plus
chr3R	27901430	chr3R	19895539..19895794	3400..3146	1215	99.2	Minus
chr3R	27901430	chr3R	5145447..5145695	3146..3393	1180	99.2	Plus
chr2R	21145070	chr2R	10892075..10892314	3401..3163	1150	99.6	Minus
chrX	22417052	chrX	7594983..7595235	3146..3401	1125	96.9	Plus
chr3L	24539361	chr3L	21743099..21743320	3367..3146	1110	100	Minus
chrX	22417052	chrX	7676251..7676464	3388..3175	1070	100	Minus
chr2R	21145070	chr2R	9468795..9468980	2651..2466	930	100	Minus
chr2L	23010047	chr2L	14617611..14617841	3395..3146	900	91.6	Minus
chr3R	27901430	chr3R	4533436..4533600	3395..3231	825	100	Minus
chr2R	21145070	chr2R	9470098..9470251	2350..2197	770	100	Minus
chr2R	21145070	chr2R	9470307..9470436	2200..2071	650	100	Minus
chr2R	21145070	chr2R	9469050..9469169	2466..2347	600	100	Minus
chr3L	24539361	chr3L	21738336..21738378	3399..3357	215	100	Minus

Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:33:58

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
2R	25286936	2R	13590600..13591879	1688..409	6400	100	Minus
2R	25286936	2R	13580567..13581338	3421..2650	3860	100	Minus
2R	25286936	2R	13592894..13593301	409..1	1995	99.8	Minus
2R	25286936	2R	13583199..13583583	2072..1688	1925	100	Minus
2R	25286936	2R	19779631..19779906	3146..3421	1365	99.6	Plus
X	23542271	X	4792441..4792716	3421..3146	1365	99.6	Minus
X	23542271	X	17431414..17431692	3421..3143	1365	99.3	Minus
X	23542271	X	21086196..21086471	3421..3146	1365	99.6	Minus
3L	28110227	3L	3475226..3475501	3146..3421	1365	99.6	Plus
2R	25286936	2R	18358452..18358727	3421..3146	1350	99.3	Minus
3L	28110227	3L	9219323..9219598	3421..3146	1350	99.3	Minus
3L	28110227	3L	11332612..11332887	3146..3421	1350	99.3	Plus
3R	32079331	3R	28255562..28255837	3146..3421	1350	99.3	Plus
3R	32079331	3R	28302169..28302444	3421..3146	1350	99.3	Minus
2L	23513712	2L	20891607..20891882	3421..3146	1350	99.3	Minus
3L	28110227	3L	9571971..9572245	3421..3147	1345	99.3	Minus
X	23542271	X	4731876..4732149	3419..3146	1340	99.3	Minus
3L	28110227	3L	19008901..19009174	3146..3419	1340	99.3	Plus
X	23542271	X	7480836..7481111	3421..3146	1335	98.9	Minus
X	23542271	X	8922475..8922750	3146..3421	1335	98.9	Plus
3L	28110227	3L	12874998..12875273	3421..3146	1335	98.9	Minus
3L	28110227	3L	15899486..15899761	3146..3421	1335	98.9	Plus
3R	32079331	3R	26642836..26643111	3146..3421	1335	98.9	Plus
3R	32079331	3R	28797673..28797948	3146..3421	1335	98.9	Plus
4	1348131	4	414820..415095	3421..3146	1335	98.9	Minus
2L	23513712	2L	14890010..14890284	3420..3146	1330	98.9	Minus
Y	3667352	Y	718541..718815	3420..3146	1330	98.9	Minus
X	23542271	X	13401543..13401819	3145..3421	1325	98.6	Plus
2R	25286936	2R	18045728..18046003	3146..3421	1320	98.6	Plus
2R	25286936	2R	22349750..22350025	3421..3146	1320	98.6	Minus
2R	25286936	2R	22360530..22360805	3146..3421	1320	98.6	Plus
X	23542271	X	4700456..4700731	3421..3146	1320	98.6	Minus
X	23542271	X	9509361..9509636	3146..3421	1320	98.6	Plus
2L	23513712	2L	19620802..19621077	3146..3421	1320	98.6	Plus
Ymm	880023	Ymm	831809..832078	3146..3415	1320	99.3	Plus
U	3151297	U	2156314..2156587	3148..3421	1310	98.5	Plus
2R	25286936	2R	11019940..11020215	3421..3146	1305	98.2	Minus
X	23542271	X	5338775..5339050	3421..3146	1305	98.2	Minus
X	23542271	X	13430320..13430595	3146..3421	1305	98.2	Plus
X	23542271	X	22569811..22570086	3146..3421	1305	98.2	Plus
3R	32079331	3R	13517289..13517564	3421..3146	1305	98.2	Minus
3R	32079331	3R	29653112..29653389	3421..3144	1300	97.8	Minus
3R	32079331	3R	6514834..6515098	3146..3410	1295	99.2	Plus
3R	32079331	3R	30480534..30480804	3416..3146	1295	98.5	Minus
2R	25286936	2R	7240627..7240902	3146..3421	1290	97.8	Plus
2R	25286936	2R	22525814..22526089	3421..3146	1290	97.8	Minus
3L	28110227	3L	5537782..5538057	3421..3146	1290	97.8	Minus
2R	25286936	2R	17147298..17147566	3414..3146	1285	98.5	Minus
3L	28110227	3L	16494039..16494310	3417..3146	1285	98.2	Minus
2L	23513712	2L	13481503..13481765	3408..3146	1285	99.2	Minus
3R	32079331	3R	29407615..29407870	3146..3401	1280	100	Plus
2L	23513712	2L	1618304..1618559	3399..3144	1280	100	Minus
2R	25286936	2R	22775111..22775377	3146..3412	1275	98.5	Plus
X	23542271	X	19472185..19472445	3406..3146	1275	99.2	Minus
3R	32079331	3R	24072153..24072429	3421..3146	1275	98.2	Minus
2L	23513712	2L	52271..52546	3146..3421	1275	97.5	Plus
2L	23513712	2L	4918227..4918481	3400..3146	1275	100	Minus
4	1348131	4	414027..414302	3421..3146	1275	97.5	Minus
2R	25286936	2R	12824253..12824508	3146..3401	1265	99.6	Plus
X	23542271	X	16936155..16936407	3146..3398	1265	100	Plus
3R	32079331	3R	29319885..29320137	3147..3399	1265	100	Plus
3R	32079331	3R	14247601..14247876	3146..3421	1260	97.1	Plus
2L	23513712	2L	9393551..9393820	3415..3146	1260	97.8	Minus
3L	28110227	3L	939833..940086	3399..3146	1255	99.6	Minus
X	23542271	X	1522916..1523165	3146..3395	1250	100	Plus
X	23542271	X	1523184..1523433	3395..3146	1250	100	Minus
3L	28110227	3L	6001785..6002033	3394..3146	1245	100	Minus
2R	25286936	2R	17277367..17277626	3146..3405	1240	98.5	Plus
3L	28110227	3L	9575985..9576232	3393..3146	1240	100	Minus
2R	25286936	2R	15004790..15005049	3421..3163	1235	99.2	Minus
3R	32079331	3R	9319722..9319969	3146..3393	1225	99.6	Plus
X	23542271	X	7703053..7703325	3146..3421	1210	96.7	Plus
3L	28110227	3L	21754164..21754385	3367..3146	1110	100	Minus
X	23542271	X	7784294..7784532	3413..3175	1075	96.7	Minus
2L	23513712	2L	14618923..14619179	3421..3146	1000	91.7	Minus
2R	25286936	2R	13581494..13581679	2651..2466	930	100	Minus
3R	32079331	3R	8707460..8707624	3395..3231	825	100	Minus
2R	25286936	2R	13582797..13582950	2350..2197	770	100	Minus
2R	25286936	2R	13583006..13583135	2200..2071	650	100	Minus
2R	25286936	2R	13581749..13581868	2466..2347	600	100	Minus
3L	28110227	3L	21749379..21749443	3421..3357	265	93.8	Minus

Blast to na_te.dros performed 2019-03-15 13:33:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
jockey	5020	jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5).	4760..5014	3146..3401	1232	98.4	Plus
Dvir\TART	8500	Dvir\TART TARTVIR 8500bp	2289..2479	1013..1202	378	70.7	Plus
jockey2	3428	jockey2 JOCKEY2 3428bp	3183..3407	3146..3402	161	58.8	Plus
R1A1-element	5356	R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1).	609..722	1666..1547	145	62	Minus
S-element	1736	S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5).	1428..1505	3224..3300	126	64.1	Plus

FI19824.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:34:49 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chr2R	9468144..9468637	2652..3145	100	<-	Minus
chr2R	9468795..9468979	2467..2651	100	<-	Minus
chr2R	9469050..9469167	2349..2466	100	<-	Minus
chr2R	9470100..9470248	2200..2348	100	<-	Minus
chr2R	9470308..9470434	2073..2199	100	<-	Minus
chr2R	9470500..9470883	1689..2072	100	<-	Minus
chr2R	9477901..9478391	1198..1688	90	==	Minus
chr2R	9478489..9479179	410..1100	100	<-	Minus
chr2R	9480195..9480602	1..409	94		Minus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-09 18:24:39 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG6191-RA	1..2154	844..2997	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:04:38 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG6191-RC	1..2241	844..3084	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:33:31 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG6191-RC	1..2241	844..3084	100		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-09 18:24:38 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG6191-RA	36..3436	1..3402	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:04:38 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG6191-RA	39..3439	1..3402	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:33:31 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
CG45088-RA	39..3439	1..3402	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:49 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	13583199..13583582	1689..2072	100	<-	Minus
2R	13580586..13581336	2652..3402	100	<-	Minus
2R	13581494..13581678	2467..2651	100	<-	Minus
2R	13581749..13581866	2349..2466	100	<-	Minus
2R	13582799..13582947	2200..2348	100	<-	Minus
2R	13583007..13583133	2073..2199	100	<-	Minus
2R	13590600..13591878	410..1688	100	<-	Minus
2R	13592894..13593301	1..409	99		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:49 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	13583199..13583582	1689..2072	100	<-	Minus
2R	13580586..13581336	2652..3402	100	<-	Minus
2R	13581494..13581678	2467..2651	100	<-	Minus
2R	13581749..13581866	2349..2466	100	<-	Minus
2R	13582799..13582947	2200..2348	100	<-	Minus
2R	13583007..13583133	2073..2199	100	<-	Minus
2R	13590600..13591878	410..1688	100	<-	Minus
2R	13592894..13593301	1..409	99		Minus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:49 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
2R	13583199..13583582	1689..2072	100	<-	Minus
2R	13580586..13581336	2652..3402	100	<-	Minus
2R	13581494..13581678	2467..2651	100	<-	Minus
2R	13581749..13581866	2349..2466	100	<-	Minus
2R	13582799..13582947	2200..2348	100	<-	Minus
2R	13583007..13583133	2073..2199	100	<-	Minus
2R	13590600..13591878	410..1688	100	<-	Minus
2R	13592894..13593301	1..409	99		Minus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:04:38 Download gff for FI19824.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_2R	9468999..9469183	2467..2651	100	<-	Minus
arm_2R	9469254..9469371	2349..2466	100	<-	Minus
arm_2R	9470304..9470452	2200..2348	100	<-	Minus
arm_2R	9470512..9470638	2073..2199	100	<-	Minus
arm_2R	9468091..9468841	2652..3402	100	<-	Minus
arm_2R	9470704..9471087	1689..2072	100	<-	Minus
arm_2R	9478105..9479383	410..1688	100	<-	Minus
arm_2R	9480399..9480806	1..409	99		Minus

FI19824.pep Sequence

Translation from 843 to 2996

> FI19824.pep
MASSLNKTRHRRRLAAISFLSNISLDGTHRDTKFGATFGSSLLCNQNKNP
SSLGLGSGGFHPHYQQHHHQRSHSATHHNHQKRHHTQQQQQQQQQQHTQQ
QQQQQQHQQQHQQQQQHQNGALCSPLLCSADVHMGIDGGIGLGLGLEDCT
TGASDGDGHFSETENMGQYLMNVLPAADHNRSSIVPAERRNIKRPTSSGR
HNHQAPGNGNMGNKLQQQQQQQHKLQQQQRQARSCAAGSGGSGAESGSDS
DSVKIPLKVSNLGSGGGVAGGAGSKLLPLRERTFSNGASDQNLQPERRAR
LNTAPGMRVGSNSSIAMGGGLKRTYVLSGSSVSHITDDSSTESLTPAGNY
AGSFRNSLSKSVQISDSRRGTSGQPLGLGQARDERMVLVSRKIPFFIFSS
LPYYKGKNGRAEFRKEDRRRRNPSTSRPLSSINDAPFDPFDLLGIQKAES
GQDISYGHLLIPSRQYEKERKKHGNASANPSIFENQMEITSTAALKNHGI
ARCFTYENNNRNSATSPTPDMKLDMDIESVILGGDSSRGQVYSASILDDP
ELIAGKHRTLLTFTSYMTSVIDYVRPSDLKKELNDKFREKFPTIQLTLSK
LRSIKREMRRINKLDSRIDLVTISQAYVYFEKLILANLINKSNRKLCAGA
CLLLSAKMNDVKGDALKSLIEKTESVFRLNRKELISSEFAVLVALEFSLH
VNRHEVLPHYQRLLYES*

FI19824.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:25:24

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF11169-PA	720	GF11169-PA	1..720	1..717	2802	85.7	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:25:28

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG22478-PA	715	GG22478-PA	1..715	1..717	3688	97.2	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:25:34

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH20067-PA	696	GH20067-PA	1..696	1..717	2358	71.5	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:49

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG6191-PC	746	CG6191-PC	1..717	1..717	3698	100	Plus
CG6191-PA	717	CG6191-PA	1..717	1..717	3698	100	Plus
CG6191-PB	728	CG6191-PB	1..728	1..717	3670	98.4	Plus
Clk-PH	895	CG7391-PH	647..846	61..234	196	34.3	Plus
Clk-PG	895	CG7391-PG	647..846	61..234	196	34.3	Plus
Clk-PF	961	CG7391-PF	713..912	61..234	196	34.3	Plus
Clk-PA	1023	CG7391-PA	775..974	61..234	196	34.3	Plus
Clk-PD	1027	CG7391-PD	779..978	61..234	196	34.3	Plus
Smr-PF	3601	CG4013-PF	213..468	61..330	196	28.1	Plus
Smr-PE	3601	CG4013-PE	213..468	61..330	196	28.1	Plus
Smr-PD	3601	CG4013-PD	213..468	61..330	196	28.1	Plus
Smr-PG	3607	CG4013-PG	219..474	61..330	196	28.1	Plus
sr-PE	906	CG7847-PE	350..551	64..247	195	34	Plus
sr-PB	906	CG7847-PB	350..551	64..247	195	34	Plus
sr-PA	1186	CG7847-PA	630..831	64..247	195	34	Plus
sr-PD	1271	CG7847-PD	630..831	64..247	195	34	Plus
Smr-PG	3607	CG4013-PG	38..206	45..231	193	31.7	Plus
psq-PK	639	CG2368-PK	114..288	65..274	186	30.5	Plus
psq-PJ	639	CG2368-PJ	114..288	65..274	186	30.5	Plus
psq-PF	645	CG2368-PF	120..294	65..274	186	30.5	Plus
psq-PG	645	CG2368-PG	120..294	65..274	186	30.5	Plus
psq-PD	645	CG2368-PD	120..294	65..274	186	30.5	Plus
psq-PH	645	CG2368-PH	120..294	65..274	186	30.5	Plus
psq-PE	645	CG2368-PE	120..294	65..274	186	30.5	Plus
psq-PN	1043	CG2368-PN	539..713	65..274	186	30.5	Plus
psq-PA	1046	CG2368-PA	539..713	65..274	186	30.5	Plus
psq-PB	1064	CG2368-PB	539..713	65..274	186	30.5	Plus
psq-PC	1064	CG2368-PC	539..713	65..274	186	30.5	Plus
psq-PM	1123	CG2368-PM	539..713	65..274	186	30.5	Plus
Smr-PF	3601	CG4013-PF	38..200	45..231	183	31.7	Plus
Smr-PE	3601	CG4013-PE	38..200	45..231	183	31.7	Plus
Smr-PD	3601	CG4013-PD	38..200	45..231	183	31.7	Plus
Unr-PC	1032	CG7015-PC	49..126	51..117	182	55.1	Plus
Unr-PA	1039	CG7015-PA	49..126	51..117	182	55.1	Plus
Unr-PE	1057	CG7015-PE	49..126	51..117	182	55.1	Plus
Unr-PD	1057	CG7015-PD	49..126	51..117	182	55.1	Plus
Unr-PB	1057	CG7015-PB	49..126	51..117	182	55.1	Plus
mei-P26-PD	1189	CG12218-PD	521..704	38..231	182	30.1	Plus
mei-P26-PB	1189	CG12218-PB	521..704	38..231	182	30.1	Plus
mei-P26-PA	1189	CG12218-PA	521..704	38..231	182	30.1	Plus
mei-P26-PC	1206	CG12218-PC	521..704	38..231	182	30.1	Plus
mei-P26-PE	1206	CG12218-PE	521..704	38..231	182	30.1	Plus
Hr38-PD	836	CG1864-PD	37..214	68..231	181	34.9	Plus
Hr38-PB	1078	CG1864-PB	279..456	68..231	181	34.9	Plus
fs(1)h-PB	2038	CG2252-PB	1508..1563	65..118	178	64.9	Plus
fs(1)h-PG	2046	CG2252-PG	1516..1571	65..118	178	64.9	Plus
Tet-PA	2860	CG43444-PA	2..107	16..117	175	44.2	Plus
Tet-PA	2860	CG43444-PA	66..127	61..116	175	57.8	Plus
Tet-PE	2866	CG43444-PE	2..107	16..117	175	44.2	Plus
Tet-PE	2866	CG43444-PE	66..127	61..116	175	57.8	Plus
Tet-PB	2915	CG43444-PB	2..107	16..117	175	44.2	Plus
Tet-PB	2915	CG43444-PB	66..127	61..116	175	57.8	Plus
Tet-PF	2921	CG43444-PF	2..107	16..117	175	44.2	Plus
Tet-PF	2921	CG43444-PF	66..127	61..116	175	57.8	Plus
CG15772-PB	259	CG15772-PB	32..105	57..127	174	52.7	Plus
CG15772-PA	259	CG15772-PA	32..105	57..127	174	52.7	Plus
CG16711-PC	1497	CG16711-PC	1368..1423	64..118	174	61.4	Plus
hdc-PC	1080	CG15532-PC	697..872	34..278	171	28	Plus
CG30389-PF	1009	CG30389-PF	835..993	50..225	170	33.3	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:25:40

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI18784-PA	690	GI18784-PA	1..690	1..717	2351	70	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:25:44

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL17005-PA	590	GL17005-PA	136..590	279..717	2063	86.9	Plus
Dper\GL17005-PA	590	GL17005-PA	1..68	1..58	268	77.9	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:25:49

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA19426-PA	707	GA19426-PA	1..707	1..717	2648	80.1	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:25:52

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM20262-PA	710	GM20262-PA	1..710	1..717	3701	97.4	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:25:55

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD25748-PA	719	GD25748-PA	1..719	1..717	3734	98.3	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:26:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ21810-PA	700	GJ21810-PA	1..700	1..717	2403	72.8	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:26:05

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK15605-PA	709	GK15605-PA	1..709	1..717	2495	73.7	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:26:08

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE13347-PA	710	GE13347-PA	1..710	1..717	3676	97.1	Plus

FI19824.hyp Sequence

Translation from 843 to 2996

> FI19824.hyp
MASSLNKTRHRRRLAAISFLSNISLDGTHRDTKFGATFGSSLLCNQNKNP
SSLGLGSGGFHPHYQQHHHQRSHSATHHNHQKRHHTQQQQQQQQQQHTQQ
QQQQQQHQQQHQQQQQHQNGALCSPLLCSADVHMGIDGGIGLGLGLEDCT
TGASDGDGHFSETENMGQYLMNVLPAADHNRSSIVPAERRNIKRPTSSGR
HNHQAPGNGNMGNKLQQQQQQQHKLQQQQRQARSCAAGSGGSGAESGSDS
DSVKIPLKVSNLGSGGGVAGGAGSKLLPLRERTFSNGASDQNLQPERRAR
LNTAPGMRVGSNSSIAMGGGLKRTYVLSGSSVSHITDDSSTESLTPAGNY
AGSFRNSLSKSVQISDSRRGTSGQPLGLGQARDERMVLVSRKIPFFIFSS
LPYYKGKNGRAEFRKEDRRRRNPSTSRPLSSINDAPFDPFDLLGIQKAES
GQDISYGHLLIPSRQYEKERKKHGNASANPSIFENQMEITSTAALKNHGI
ARCFTYENNNRNSATSPTPDMKLDMDIESVILGGDSSRGQVYSASILDDP
ELIAGKHRTLLTFTSYMTSVIDYVRPSDLKKELNDKFREKFPTIQLTLSK
LRSIKREMRRINKLDSRIDLVTISQAYVYFEKLILANLINKSNRKLCAGA
CLLLSAKMNDVKGDALKSLIEKTESVFRLNRKELISSEFAVLVALEFSLH
VNRHEVLPHYQRLLYES*

FI19824.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:32:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
CG6191-PC	746	CG6191-PC	1..717	1..717	3698	100	Plus
CG6191-PA	717	CG6191-PA	1..717	1..717	3698	100	Plus
CG6191-PB	728	CG6191-PB	1..728	1..717	3670	98.4	Plus
Clk-PH	895	CG7391-PH	647..846	61..234	196	34.3	Plus
Clk-PG	895	CG7391-PG	647..846	61..234	196	34.3	Plus

Library:	FI
Tissue Source:	various Drosophila melanogaster
Created by:
Date Registered:	2005-11-08
Comments:	Drosophila melanogaster corrected cDNA clones
Original Plate Number:	198
Well:	24
Vector:	pOT2
Associated Gene/Transcript	CG6191-RA
Protein status:	FI19824.pep: gold
Sequenced Size:	3421

Clone FI19824 Report

Clone and Library Details

Clone Sequence Records

FI19824.complete Sequence

FI19824.complete Blast Records

FI19824.complete Sim4 Records

FI19824.pep Sequence

FI19824.pep Blast Records

FI19824.hyp Sequence

FI19824.hyp Blast Records