Clone FI19868 Report

Search the DGRC for FI19868

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:198
Well:68
Vector:pOT2
Associated Gene/TranscriptCG14971-RA
Protein status:FI19868.pep: gold
Sequenced Size:2467

Clone Sequence Records

FI19868.complete Sequence

2467 bp assembled on 2012-04-10

GenBank Submission: BT133405.1

> FI19868.complete
CTGGCGCAAAACAAGCCGGACGCCCATCACTGCCTGTGTATAAACAGTTG
GCAAGAAACGAAGTCGAAAAACAGAAGTTTTGCTCGAAATGGCAGCGTAA
AAACCCATTAAAGCCACTTTCATTACTGCACGGCCGAGTCGGAATATATA
CATATATAGAATAGTGACAGATAACAGGCGGAGAGGCGGAAAAGCAGCGG
AACACCCGGAACATATTGATACATATGGACGTAGACTTCAAGATAACGAA
AGAACTTTCAGGCATTTCCGATAATATATAATGGTGGCGGCCAAGTACGA
GCGGCTGAATACCAGTGGTGAGGCGGCCGGGAACGGAAATGGGAATGCCA
GCGATGCAGAAGACGAGGAGATCGAACTCCATTTGGCGCAGAAGACGCAG
CTGGGTAATGGCCATCGGTTGCGCCAGAGCAACTTCAAGTACGCCAGCGG
AAAGTGCGGGTCCGGAGAGGCGCCGTGCACCAACGAAACGGCCACGTTGG
CCCAGGAGAACATGATGATGCAAATGGCCGTTGGTACACTGGCCATTATC
TTCCTGTATCTGGCATTATCCATATCGCTGACATTCTACCAAACGGACAT
CAACCGGCAGATGCCCTTTCCCCTGGCCATCGTAACCTATCATTTGGTTG
TGAAGTTCCTTCTGGCCGCCGCGGCGCGCAGAATCTACAGGATGCGAGTG
GGCCGATCGCGGGTTCAGTTGGATTGGAGGCTCGCCCTGCGGAAAATGGC
ACCCACGGGAGTTGCCAGTGCCATCGACATTGGATTCTCCAACTGGGGCC
TGGCCCTGGTGCCCATTTCCCTCTACACCATGACCAAGTCCTCGACCATT
GTCTTCATCCTGCTGTTCGCCATCGCTTTTGGACTGGAGAAGAAGAGCTG
GTATCTGGTCTCGATTGTGGGCCTGATAGGCACTGGCCTTCTGATGTTCA
CCTACAAGTCAACGGACTTCAATGCCCTTGGTTTCTTCTTCATCCTTTTC
GCCTCGCTGAGCAGCGGACTGCGATGGAGTTTCGCGCAGTTCATAATGCA
GAAATCGAAGCTAGGCTTGCACAATCCCATCGATATGATATATTACATGC
AGCCGTGGATGATTGCCTCGCTGGTGCCCCTCGTAATTGGAATCGAAGGT
GCCGGGCTCATCGCGGTAATAGAAGATCTGCACAACCACACTTCGAATGA
GATAACTTGGGCCATTGCGAGGATATCAGCGGGCGCTTTGCTGGCTTTTC
TCATGGAGTTCAGCGAATTCTTGGTGCTCTGCAAGACCTCCAGTCTGACG
CTCTCGATAGCCGGCATTTTCAAGGATATCTGCCAGTTGGCACTAGCCGT
GACTATCAGGAAGGACCACCTGAGTGTCATCAACTACATTGGCTTGATCA
TTTGCCTGGCTGGTATCGTTTGCCACCTACTGCACAAGTACTCCAATATG
AAGGAGATGCAGCGGCAGCAGGAGTTGCAGCTCGATAACGACCAGGAGGA
GTCGTCGCCAGGGGAGTACAAATTCAACGATGGCAGTGCCATTGTGGGTG
TCCATGTGAAGTCGCACTCCACGCTGACGGTGCCATTGCTGGAGCAAACC
GACTCGGAGGACGAGTCTGGTGCAAGCAACAAACAGAACGCCTCCGATGT
GATCTTCGACGTGCTGAAGCGACGCGACATGCAGCGATGAAAGCCAATCC
TTGTACAGATGTCCTGTAAATGTTGTAAATTCAAACTACTTTTATGTTTA
CCAGCACCTTGGCCCACGCAACTACTTACTACACTGGGATTAGCAATGCA
TGTTTAAGTAAGCTAGTTAGTTTGACACTCTTCATTCCTTCCGTCACCGA
TTCCCTCAACTTCCTCGATGCATTCCCGCCTTGTGCATTTAGGGGCTAGG
CTAGATATATGAGACGTACGTCAAATTGAAGTGTAATGAGTAACACCCAT
GTTTAAGTTGATTCGATTGTAATGACACGAAATCTGAGGAACGAAGAGTA
ATCTTTGGACAATCAATTAATTTCTAATAGCAGTTAGTTTTAATCTATTT
GCATTTGTGAAGCTGAAAATGTATTGAGAACTGTCCAAAGTTTGCTTGAG
TTCCGAAATCTATCTCGTTTCTTTTTTGTAAAAACTCGATCTTAAGTCAT
ACAACCTATGTAAAAATAAGAAAGCCTTAATGACCCTTTCATTGTTCCTT
AACTGACATCTTTAATTTGGCATTCCAAATTGAATTGTAAACCCTTAAAG
TTATAAGAATTTTTAATTTGAAAGCTCCCGCAAACGTCTGATTAAATTAA
ACAAGGGGCATTGTTCTTTAGCGAATTATAAATAATGTCTTCGTTGTTTT
TAGTTAATGCATCATTTTTGTTGAGTTTTTGACATATTGTATTTATAAGT
TTATAAGATAATTTCAAATATATATTAAATACATATATATTAAAGCATAA
AAAAAAAAAAAAAAAAA

FI19868.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:36:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 3467449..3468750 2448..1147 6360 99.2 Minus
chr3L 24539361 chr3L 3469789..3470429 895..255 3130 99.2 Minus
chr3L 24539361 chr3L 3468807..3469063 1150..894 1285 100 Minus
chr3L 24539361 chr3L 3470486..3470739 254..1 1255 99.6 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3468021..3469324 2450..1147 6370 99.2 Minus
3L 28110227 3L 3470388..3471028 895..255 3130 99.2 Minus
3L 28110227 3L 3469381..3469637 1150..894 1285 100 Minus
3L 28110227 3L 3471085..3471338 254..1 1240 99.2 Minus
Blast to na_te.dros performed on 2019-03-15 13:36:12 has no hits.

FI19868.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:36:56 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 3467509..3468748 1149..2388 99 <- Minus
chr3L 3468809..3469061 896..1148 100 <- Minus
chr3L 3469789..3470429 255..895 99 <- Minus
chr3L 3470486..3470739 1..254 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-10 15:45:15 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14971-RA 1..1410 281..1690 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:06:28 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14971-RA 1..1410 281..1690 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:35:13 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14971-RA 1..1410 281..1690 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-10 15:45:15 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14971-RA 1..2448 1..2448 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:06:28 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14971-RA 1..2419 30..2448 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:35:13 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
CG14971-RA 1..2419 30..2448 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:56 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3468023..3469322 1149..2448 99 <- Minus
3L 3469383..3469635 896..1148 100 <- Minus
3L 3470388..3471028 255..895 99 <- Minus
3L 3471085..3471338 1..254 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:56 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3468023..3469322 1149..2448 99 <- Minus
3L 3469383..3469635 896..1148 100 <- Minus
3L 3470388..3471028 255..895 99 <- Minus
3L 3471085..3471338 1..254 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:56 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3468023..3469322 1149..2448 99 <- Minus
3L 3469383..3469635 896..1148 100 <- Minus
3L 3470388..3471028 255..895 99 <- Minus
3L 3471085..3471338 1..254 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:06:28 Download gff for FI19868.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3468023..3469322 1149..2448 99 <- Minus
arm_3L 3469383..3469635 896..1148 100 <- Minus
arm_3L 3470388..3471028 255..895 99 <- Minus
arm_3L 3471085..3471338 1..254 99   Minus

FI19868.hyp Sequence

Translation from 280 to 1689

> FI19868.hyp
MVAAKYERLNTSGEAAGNGNGNASDAEDEEIELHLAQKTQLGNGHRLRQS
NFKYASGKCGSGEAPCTNETATLAQENMMMQMAVGTLAIIFLYLALSISL
TFYQTDINRQMPFPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWR
LALRKMAPTGVASAIDIGFSNWGLALVPISLYTMTKSSTIVFILLFAIAF
GLEKKSWYLVSIVGLIGTGLLMFTYKSTDFNALGFFFILFASLSSGLRWS
FAQFIMQKSKLGLHNPIDMIYYMQPWMIASLVPLVIGIEGAGLIAVIEDL
HNHTSNEITWAIARISAGALLAFLMEFSEFLVLCKTSSLTLSIAGIFKDI
CQLALAVTIRKDHLSVINYIGLIICLAGIVCHLLHKYSNMKEMQRQQELQ
LDNDQEESSPGEYKFNDGSAIVGVHVKSHSTLTVPLLEQTDSEDESGASN
KQNASDVIFDVLKRRDMQR*

FI19868.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:34:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14971-PA 469 CG14971-PA 1..469 1..469 2375 100 Plus

FI19868.pep Sequence

Translation from 280 to 1689

> FI19868.pep
MVAAKYERLNTSGEAAGNGNGNASDAEDEEIELHLAQKTQLGNGHRLRQS
NFKYASGKCGSGEAPCTNETATLAQENMMMQMAVGTLAIIFLYLALSISL
TFYQTDINRQMPFPLAIVTYHLVVKFLLAAAARRIYRMRVGRSRVQLDWR
LALRKMAPTGVASAIDIGFSNWGLALVPISLYTMTKSSTIVFILLFAIAF
GLEKKSWYLVSIVGLIGTGLLMFTYKSTDFNALGFFFILFASLSSGLRWS
FAQFIMQKSKLGLHNPIDMIYYMQPWMIASLVPLVIGIEGAGLIAVIEDL
HNHTSNEITWAIARISAGALLAFLMEFSEFLVLCKTSSLTLSIAGIFKDI
CQLALAVTIRKDHLSVINYIGLIICLAGIVCHLLHKYSNMKEMQRQQELQ
LDNDQEESSPGEYKFNDGSAIVGVHVKSHSTLTVPLLEQTDSEDESGASN
KQNASDVIFDVLKRRDMQR*

FI19868.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10266-PA 488 GF10266-PA 1..488 1..469 1794 76.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:27:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14256-PA 469 GG14256-PA 1..469 1..469 2193 91.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:27:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16885-PA 475 GH16885-PA 1..475 1..469 1389 59.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG14971-PA 469 CG14971-PA 1..469 1..469 2375 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12028-PA 486 GI12028-PA 1..486 1..469 1614 65.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13258-PA 300 GL13258-PA 1..300 184..469 1178 76.1 Plus
Dper\GL13257-PA 184 GL13257-PA 1..183 1..164 483 60.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:27:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13395-PA 501 GA13395-PA 1..501 1..469 1764 71.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:27:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14050-PA 467 GM14050-PA 1..467 1..469 2402 96.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13327-PA 469 GD13327-PA 1..469 1..469 2474 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13297-PA 490 GJ13297-PA 1..490 1..469 1639 65.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20374-PA 518 GK20374-PA 47..518 25..469 1600 65.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20684-PA 469 GE20684-PA 1..469 1..469 2232 92.8 Plus