Clone FI19901 Report

Search the DGRC for FI19901

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:199
Well:1
Vector:pOTB7
Associated Gene/TranscriptS-Lap5-RA
Protein status:FI19901.pep: gold
Sequenced Size:2093

Clone Sequence Records

FI19901.complete Sequence

2093 bp assembled on 2012-04-09

GenBank Submission: BT133398.1

> FI19901.complete
AGTTAGTATAGCCTTAGGCCAAACAGAGGAACACACTTTCAACTGTCATT
CCAAAATTGTTAGGCACTTCGTGATCTAAAAAAAGCTAACCAGACGTGCG
CAAGGGCGGACTAACCAGGACTAACCACACACCGTGTATCTCGAAGATGG
CATCCACACGCATGATCAGTGCTTTTACGCGCAATCCAAGATTATATCAA
CAGGTCACGGCACCCTGGAAATCGTACAATCTGTTTGGAACACCACTTTT
TAACCACAGACTTCAGCCAGCGGATTCTCAAATCTGGAGGGGATTAGCAG
ACAAGTGTGACAACAAGACTGTTATCAAGGGCGTGGTGGTGGGCGTCTAC
TCCAAGGAGGGCGACGGTAAGGAGGTCAAGATGACGTCCAGCGGCGAGAA
GTTCGACGACCGAACTCAGGGCAAGGTCTCGGAGCTGTTGCGCGAAACTG
GAATCAAGGGGGAACTGGGCAAGGGTAAGGTCTTCATGAACGTGGATGCC
GAATTCCGGGCAGTGGCTGTGGTGGGTTTGGGCCAAGAAGGTGCCGGCTT
CAATGACCTGGAGAATATCGACGAGGGTATGGAGAATGCCCGCGTTGCCG
CTGGCGTCGGAGCTCGGGCATTGCAACTGCAGGGTTGCACGGAAGTCTTT
GTGGACTCCATGGAATATCCGGAGCAGGCGGCGGAGGGCAGTGCTCTGGC
CATCTGGCGTTACAATAGCAACAAGCGCAAGCAGGATCGCACTCAGGTAC
CCAAACTGGATCTGTACGACTCACCGGATGTGGATGCCTGGACGAGGGGT
CTCTTCAAGGCGGAATCTCAGAACTTGGCTCGAAGATTGAGCGATTCGCC
GGCTAATCAGATGACCCCCACCATATTCGCCCAATCGGCGGTGGATGCCC
TGTGTCCGTGCGGCGTTTCCGTGGAGGTGCGATCCATGGATTGGATAGAA
ATGAATCATCTCAATTCGTTTCTAATGATAGCCAAAGGCAGCTGCGAGCC
ACCGGTGGTCCTGGAGGTCAGCTACTGCGGCACAGCACCCGAGGATCGGC
CCATTCTGCTATTGGGCAAGGGTTTGACCTACAACAGTGGCGGATTGTGC
CTGCGGCCAAAGGATTGCCTGCATATGTACCGTGGCTGCATGGCCGGAGC
AGCCGTTTGTGTGGCCGCCGTTCGAGCTGCGGCAGCCCTTTCCCTGCCTG
TAAACATCACGGCCGTACTGCCGCTCTGCGAGAATATGCCATCGGGAATG
GCTGTAAAGCCGGGTGATGTGGTCACCCTGCTCAATGGCAAGACGATGGG
TATTGTGGATGTGAGCAAAGCTGGAACGGTGGTATTGGCTGATCCCCTGC
TCTTTGCCCAGACGACGTACAAGCCTCGTCTGGTGGTGGACTTGGCCACC
GTTGGCTATGGCGTCTGTGCTGGCCTTGGAGAATCGGCTGCCGGATTGTT
TACCAATTCCAATTTCATAGCCAAGCAGTTCGAGAAGGCTGGCGGCCTGA
CTGGAGATCGTTTATGGAGGCTGCCCTTGTGGCGCTACTTCAAGCAGCTG
GTAACCCCGAATCTCACCTTCGACATCAGCAATAGGGGCATTGGTCCCGC
TTCCAGTTGCATTGCTGCCGCCGTGCTGCACGAACTGGTTCCATGCGCGG
ATTGGGCCCACATTGATATCCGGAATGTGGGCATGCTGACACGCCACAAT
CCGCTGCCGTATCTGCTCAAGGATCGGATGACCGGCCGACCCACCCGCAC
CATCGTACAGTTCCTGTATCAGATGGCCTGTCCGGAAAGCAAGTAGTCTC
CGGATCTGGATCGTCCGCACCTGTGGCGCTAGTTACCACCATTGCTTGTT
CTATTTTACATTTGTTACGTGTCCCGTTTTTGGTGTTTGTTCTTTTCACA
ATATTGTCTCCATGTCCAAATTTTTGGTTTAGTGTTCCGTGAGCAGCTGG
GTAACGACACATTGAAGACAGTTTTACGGACAAATGGACCAGGTCAGTTA
TTAATGGTGGAAGCAGTTCGACTGGCTTCTATGGATCGTCTCCCAGCTGC
ACAAAATTAAATGATTTTAAAGTGCAAAAAAAAAAAAAAAAAA

FI19901.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:33:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9483978..9486051 1..2075 10235 99.7 Plus
chr2R 21145070 chr2R 12422834..12423639 570..1375 955 74.6 Plus
chr2R 21145070 chr2R 12379047..12379837 508..1298 730 72.8 Plus
chr2R 21145070 chr2R 9666407..9666984 1072..495 445 71.8 Minus
chr3L 24539361 chr3L 10458495..10458807 748..1060 395 75.1 Plus
chr3L 24539361 chr3L 10482880..10483451 514..1085 340 70.6 Plus
chr2R 21145070 chr2R 9666180..9666252 1299..1227 200 84.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:33:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13596677..13598752 1..2077 10245 99.7 Plus
2R 25286936 2R 16535557..16536362 570..1375 955 74.6 Plus
2R 25286936 2R 16491721..16492511 508..1298 745 72.9 Plus
2R 25286936 2R 13779070..13779660 1085..495 450 71.7 Minus
3L 28110227 3L 10467068..10467380 748..1060 395 75.1 Plus
3L 28110227 3L 10491463..10492034 514..1085 340 70.6 Plus
2R 25286936 2R 13778856..13778928 1299..1227 185 83.6 Minus
Blast to na_te.dros performed 2019-03-15 13:33:35
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 6477..6564 1936..1849 142 65.2 Minus

FI19901.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:34:37 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9483978..9486051 1..2075 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-09 14:50:39 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
CG18369-RA 1..1650 147..1796 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:04:08 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
S-Lap5-RA 1..1650 147..1796 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:33:08 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
S-Lap5-RA 1..1650 147..1796 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-09 14:50:38 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
CG18369-RA 1..2074 1..2075 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:04:08 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
S-Lap5-RA 1..2074 1..2075 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:33:08 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
S-Lap5-RA 1..2074 1..2075 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:37 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13596677..13598750 1..2075 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:37 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13596677..13598750 1..2075 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:37 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13596677..13598750 1..2075 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:04:08 Download gff for FI19901.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9484182..9486255 1..2075 99   Plus

FI19901.hyp Sequence

Translation from 146 to 1795

> FI19901.hyp
MASTRMISAFTRNPRLYQQVTAPWKSYNLFGTPLFNHRLQPADSQIWRGL
ADKCDNKTVIKGVVVGVYSKEGDGKEVKMTSSGEKFDDRTQGKVSELLRE
TGIKGELGKGKVFMNVDAEFRAVAVVGLGQEGAGFNDLENIDEGMENARV
AAGVGARALQLQGCTEVFVDSMEYPEQAAEGSALAIWRYNSNKRKQDRTQ
VPKLDLYDSPDVDAWTRGLFKAESQNLARRLSDSPANQMTPTIFAQSAVD
ALCPCGVSVEVRSMDWIEMNHLNSFLMIAKGSCEPPVVLEVSYCGTAPED
RPILLLGKGLTYNSGGLCLRPKDCLHMYRGCMAGAAVCVAAVRAAAALSL
PVNITAVLPLCENMPSGMAVKPGDVVTLLNGKTMGIVDVSKAGTVVLADP
LLFAQTTYKPRLVVDLATVGYGVCAGLGESAAGLFTNSNFIAKQFEKAGG
LTGDRLWRLPLWRYFKQLVTPNLTFDISNRGIGPASSCIAAAVLHELVPC
ADWAHIDIRNVGMLTRHNPLPYLLKDRMTGRPTRTIVQFLYQMACPESK*

FI19901.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:50
Subject Length Description Subject Range Query Range Score Percent Strand
S-Lap5-PA 549 CG18369-PA 1..549 1..549 2870 100 Plus
S-Lap8-PA 534 CG4439-PA 30..533 41..545 1883 69.1 Plus
loopin-1-PC 526 CG4750-PC 30..524 47..545 1780 67.5 Plus
loopin-1-PA 526 CG4750-PA 30..524 47..545 1780 67.5 Plus
S-Lap7-PB 527 CG13340-PB 34..527 55..549 1733 64.4 Plus

FI19901.pep Sequence

Translation from 146 to 1795

> FI19901.pep
MASTRMISAFTRNPRLYQQVTAPWKSYNLFGTPLFNHRLQPADSQIWRGL
ADKCDNKTVIKGVVVGVYSKEGDGKEVKMTSSGEKFDDRTQGKVSELLRE
TGIKGELGKGKVFMNVDAEFRAVAVVGLGQEGAGFNDLENIDEGMENARV
AAGVGARALQLQGCTEVFVDSMEYPEQAAEGSALAIWRYNSNKRKQDRTQ
VPKLDLYDSPDVDAWTRGLFKAESQNLARRLSDSPANQMTPTIFAQSAVD
ALCPCGVSVEVRSMDWIEMNHLNSFLMIAKGSCEPPVVLEVSYCGTAPED
RPILLLGKGLTYNSGGLCLRPKDCLHMYRGCMAGAAVCVAAVRAAAALSL
PVNITAVLPLCENMPSGMAVKPGDVVTLLNGKTMGIVDVSKAGTVVLADP
LLFAQTTYKPRLVVDLATVGYGVCAGLGESAAGLFTNSNFIAKQFEKAGG
LTGDRLWRLPLWRYFKQLVTPNLTFDISNRGIGPASSCIAAAVLHELVPC
ADWAHIDIRNVGMLTRHNPLPYLLKDRMTGRPTRTIVQFLYQMACPESK*

FI19901.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:28:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13707-PA 550 GF13707-PA 1..550 1..549 2412 85.8 Plus
Dana\GF13605-PA 527 GF13605-PA 20..527 36..547 1821 66 Plus
Dana\GF10596-PA 522 GF10596-PA 34..521 61..549 1816 66.1 Plus
Dana\GF13602-PA 531 GF13602-PA 37..530 53..545 1816 68.5 Plus
Dana\GF11165-PA 529 GF11165-PA 36..529 55..549 1741 64 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:28:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20395-PA 552 GG20395-PA 1..552 1..549 2750 95.5 Plus
Dere\GG20609-PA 534 GG20609-PA 30..533 41..545 1862 69.3 Plus
Dere\GG20611-PA 526 GG20611-PA 30..524 47..545 1815 67.7 Plus
Dere\GG22472-PA 528 GG22472-PA 35..528 55..549 1750 64.2 Plus
Dere\GG15437-PA 523 GG15437-PA 35..522 61..549 1730 63.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:28:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21028-PA 554 GH21028-PA 18..554 12..549 2268 80.1 Plus
Dgri\GH21242-PA 520 GH21242-PA 21..520 45..548 1807 65.5 Plus
Dgri\GH14946-PA 528 GH14946-PA 42..525 63..547 1766 66 Plus
Dgri\GH21239-PA 516 GH21239-PA 28..515 53..545 1761 66.3 Plus
Dgri\GH14947-PA 522 GH14947-PA 35..522 61..549 1760 63.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:26
Subject Length Description Subject Range Query Range Score Percent Strand
S-Lap5-PA 549 CG18369-PA 1..549 1..549 2870 100 Plus
S-Lap8-PA 534 CG4439-PA 30..533 41..545 1883 69.1 Plus
loopin-1-PC 526 CG4750-PC 30..524 47..545 1780 67.5 Plus
loopin-1-PA 526 CG4750-PA 30..524 47..545 1780 67.5 Plus
S-Lap7-PB 527 CG13340-PB 34..527 55..549 1733 64.4 Plus
S-Lap7-PA 527 CG13340-PA 34..527 55..549 1733 64.4 Plus
S-Lap3-PD 535 CG32063-PD 47..532 61..547 1727 64.9 Plus
S-Lap3-PC 535 CG32063-PC 47..532 61..547 1727 64.9 Plus
S-Lap3-PB 535 CG32063-PB 47..532 61..547 1727 64.9 Plus
S-Lap4-PA 524 CG32064-PA 36..523 61..549 1666 61.3 Plus
S-Lap2-PA 552 CG32351-PA 51..546 61..548 985 42.1 Plus
S-Lap1-PA 555 CG6372-PA 54..549 61..548 963 41.3 Plus
grsm-PB 558 CG7340-PB 224..452 227..456 219 26.5 Plus
grsm-PF 655 CG7340-PF 321..549 227..456 219 26.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18629-PA 551 GI18629-PA 1..551 1..549 2318 77.5 Plus
Dmoj\GI20529-PA 523 GI20529-PA 27..523 48..548 1789 65.5 Plus
Dmoj\GI20526-PA 525 GI20526-PA 37..524 53..545 1789 64.3 Plus
Dmoj\GI11471-PA 526 GI11471-PA 33..523 56..547 1782 65.7 Plus
Dmoj\GI11473-PA 521 GI11473-PA 10..521 25..549 1704 58.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10971-PA 524 GL10971-PA 6..524 34..549 2248 79.3 Plus
Dper\GL10744-PA 528 GL10744-PA 36..523 53..545 1712 65.3 Plus
Dper\GL17001-PA 524 GL17001-PA 30..524 55..549 1706 61.6 Plus
Dper\GL25760-PA 529 GL25760-PA 43..527 61..546 1702 63 Plus
Dper\GL21275-PA 529 GL21275-PA 43..527 61..546 1698 63.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14907-PA 527 GA14907-PA 29..527 48..549 2299 82.9 Plus
Dpse\GA24552-PA 524 GA24552-PA 6..524 34..549 2248 79.3 Plus
Dpse\GA16651-PA 521 GA16651-PA 15..521 42..549 1728 62.4 Plus
Dpse\GA18184-PA 528 GA18184-PA 27..523 44..545 1724 64.3 Plus
Dpse\GA12219-PA 524 GA12219-PA 30..524 55..549 1710 61.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21483-PA 524 GM21483-PA 1..524 1..549 2703 92.7 Plus
Dsec\GM21704-PA 534 GM21704-PA 30..533 41..545 1855 69.1 Plus
Dsec\GM21706-PA 526 GM21706-PA 30..524 47..545 1814 67.7 Plus
Dsec\GM25211-PA 535 GM25211-PA 47..532 61..547 1725 64.9 Plus
Dsec\GM25212-PA 524 GM25212-PA 36..523 61..549 1710 62 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10979-PA 549 GD10979-PA 1..549 1..549 2905 98.2 Plus
Dsim\GD11203-PA 526 GD11203-PA 30..524 47..545 1812 67.7 Plus
Dsim\GD25742-PA 527 GD25742-PA 34..527 55..549 1757 64.4 Plus
Dsim\GD14243-PA 525 GD14243-PA 47..522 61..547 1658 63.2 Plus
Dsim\GD14244-PA 510 GD14244-PA 36..509 61..549 1632 59.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21638-PA 553 GJ21638-PA 2..553 1..549 2335 79.8 Plus
Dvir\GJ22378-PA 523 GJ22378-PA 19..523 35..548 1805 64.6 Plus
Dvir\GJ13666-PA 521 GJ13666-PA 34..521 61..549 1777 65.2 Plus
Dvir\GJ20697-PA 523 GJ20697-PA 42..523 67..549 1757 64.8 Plus
Dvir\GJ13663-PA 535 GJ13663-PA 42..532 56..547 1752 65.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15975-PA 551 GK15975-PA 1..551 1..549 2345 80 Plus
Dwil\GK12271-PA 523 GK12271-PA 35..522 61..549 1811 66.7 Plus
Dwil\GK21703-PA 532 GK21703-PA 39..531 53..549 1804 65.6 Plus
Dwil\GK21700-PA 539 GK21700-PA 51..539 60..549 1789 65.3 Plus
Dwil\GK24050-PA 534 GK24050-PA 46..531 61..547 1749 65.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12557-PA 552 GE12557-PA 1..552 1..549 2750 95.7 Plus
Dyak\GE11799-PA 534 GE11799-PA 30..533 41..545 1851 68.9 Plus
Dyak\GE11801-PA 526 GE11801-PA 30..524 47..545 1828 67.9 Plus
Dyak\GE13342-PA 527 GE13342-PA 34..527 55..549 1767 64.6 Plus
Dyak\GE21747-PA 523 GE21747-PA 33..522 59..549 1758 64.2 Plus