Clone FI19905 Report

Search the DGRC for FI19905

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:199
Well:5
Vector:pOTB7
Associated Gene/TranscriptCG33489-RA
Protein status:FI19905.pep: gold
Sequenced Size:1772

Clone Sequence Records

FI19905.complete Sequence

1772 bp assembled on 2012-04-09

GenBank Submission: BT133392.1

> FI19905.complete
CTTTTAATTTGGTTACTTGCGATACTCACATACAAAGCCACCAATCTTCT
TTGATGTAACTACCAAACCGAGCTCAACATATTCAAAATGTCAAAGGAAT
CAAGCTCACCTACAAATTTAAAGACACTCATAGAAAACTGAATACATAAT
ATATATAAAAAAAAACAAGTAGGAAACATAAGCAGACCGTGTACAATGGC
TAACAAAGGACACTTTATCGAGAGGAATGGGGCCTTTCGTGCTGCCGGAT
TGCCCTCCTTCGGGGACGATAAGATTTCTTTCAAGGATTGCGTGATCATT
GCCCATCCGTCGGAGGAAATTCGTCATCAGTTAGAATTGGAGTGCAGAAG
AAACAAGCCTCAACCCTTCGGAAAACTATCGCCAATTCTGCCGGAGAGCA
AAATGGGCGAACTTCTTAGCAGCGAGGGTCAAAAGTCACGTGTGGCTGTG
TTCAAGGAGAAGTTTCTGGAGGATATGTACTGTAAGTTTGGAAAAACCGG
ACAAATACAGCCGACGCACTCGAAACCCGATGATGTCACCAATTGGAGTC
ATACTTTCGGACGCGCCAATCCTCCAGCGGAAACGTTATATAGCACTATA
ATGCCGAAAAAATCGGCCGATCAGGTTAATCGCGAATATGCCGAGTTTCA
TCGAGGTCACATCGTTAGTAACAACCATTACTTTCCATCTGAGCAGATCA
ATCGCAGATATGATAAGCCCTTTGATCGATTGAATACCTATGGAGTTTTG
CAAGGCGCCGAGCACAGTGGTTCGACCATGAAGAAATGTTTAATGCAAGG
TGACGAGCATTTAACAGTGGTCTCAAAACCGTGGATGGATTATGTACAAA
AAACCAAAGCTCCTTTGGGTAAAAAATACGAAAAATACTTAGATAAAGTG
CCGGACGTGTTCTTTGGCTATCGTCCCCATACGGACAAGTGCACCATTAG
AATGTTGCTGGAGGACATTAGGCCGTGTGAAGAGGACAATTCTTTGGTGA
TGGCTCTATCCTATTTGAATCGACTGCGTGAGAGTCTTCACAAGCGGAAT
GACTTCTATATGATGGATCTGATAGCATCGCTGGAGAGAGAGGATAAGGA
GCATACGGGTCACATGCCCCTCTCGCAGATCCTTGGGACCATGTACAAGC
TGCACATCCGTGTGGATGCGGCGAAAATTCGTACCATGTTGTCGCATTTC
GGTAAGATCCTCGACGAGGGCTGTCCCACGGAGCGGGTGAACTACGATCA
CTTTTGCCGTATACTCTCCGTTCAGCAACCGCTGCCGAATGTCGGATGTA
TTGGCCATATTCCGGATAACATGTACAACAAGGAAACTACGTATACAAAA
CTATGCAAGGATCGCATGGCAGATATACCTGTGTCGCCGGAATTTAACTG
GCCAAACCGGAGTGCTCATCGTACGGACGATATCAACACACATGTGAAGG
ATGTCATACAACCGGAACTGCCAATAAAAGTTGGCCTCAGACCCAGCGAC
AAGACTTGGCCACGGAGCAAGGATCAAATAGAGCGAATATTCGATAATAT
TGTCTCCAAGGATGCGTTCGAAAATATTTGGCAGCGTATAATGGCAAAGA
AGAAGACCAATGATCAGGATCTAAAGGAATTGGCATCTGTCGCACAGTTT
CGTGCTGCAATGAACTGCGAAATGCATGCATCTACATAAAAAAATTGCAA
TTTCTTTCCATAATATTATCTTGTAGGTGAGAAAATAAAAAGAAAAAACC
TATGAAAAAAAAAAAAAAAAAA

FI19905.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11565682..11566553 1753..885 4160 98.7 Minus
chr3L 24539361 chr3L 11567262..11567967 707..1 3320 98.3 Minus
chr3L 24539361 chr3L 11566765..11566943 884..706 865 98.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11574772..11575630 1741..885 4170 99.3 Minus
3L 28110227 3L 11576338..11577044 707..1 3415 98.9 Minus
3L 28110227 3L 11575841..11576019 884..706 865 98.9 Minus
Blast to na_te.dros performed on 2019-03-15 13:33:53 has no hits.

FI19905.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:34:46 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11565681..11566553 885..1754 98 <- Minus
chr3L 11566765..11566941 708..884 98 <- Minus
chr3L 11567262..11567967 1..707 95   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-09 18:00:10 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
CG33489-RA 1..1494 196..1689 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:04:32 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
CG33489-RA 1..1494 196..1689 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:33:25 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
CG33489-RA 1..1494 196..1689 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-09 18:00:09 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
CG33489-RA 1..1731 1..1729 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:04:32 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
CG33489-RA 1..1731 1..1729 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:33:25 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
CG33489-RA 1..1731 1..1729 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:46 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11574784..11575630 885..1729 99 <- Minus
3L 11575841..11576017 708..884 98 <- Minus
3L 11576338..11577044 1..707 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:46 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11574784..11575630 885..1729 99 <- Minus
3L 11575841..11576017 708..884 98 <- Minus
3L 11576338..11577044 1..707 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:46 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11574784..11575630 885..1729 99 <- Minus
3L 11575841..11576017 708..884 98 <- Minus
3L 11576338..11577044 1..707 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:04:32 Download gff for FI19905.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11567884..11568730 885..1729 99 <- Minus
arm_3L 11568941..11569117 708..884 98 <- Minus
arm_3L 11569438..11570144 1..707 98   Minus

FI19905.pep Sequence

Translation from 195 to 1688

> FI19905.pep
MANKGHFIERNGAFRAAGLPSFGDDKISFKDCVIIAHPSEEIRHQLELEC
RRNKPQPFGKLSPILPESKMGELLSSEGQKSRVAVFKEKFLEDMYCKFGK
TGQIQPTHSKPDDVTNWSHTFGRANPPAETLYSTIMPKKSADQVNREYAE
FHRGHIVSNNHYFPSEQINRRYDKPFDRLNTYGVLQGAEHSGSTMKKCLM
QGDEHLTVVSKPWMDYVQKTKAPLGKKYEKYLDKVPDVFFGYRPHTDKCT
IRMLLEDIRPCEEDNSLVMALSYLNRLRESLHKRNDFYMMDLIASLERED
KEHTGHMPLSQILGTMYKLHIRVDAAKIRTMLSHFGKILDEGCPTERVNY
DHFCRILSVQQPLPNVGCIGHIPDNMYNKETTYTKLCKDRMADIPVSPEF
NWPNRSAHRTDDINTHVKDVIQPELPIKVGLRPSDKTWPRSKDQIERIFD
NIVSKDAFENIWQRIMAKKKTNDQDLKELASVAQFRAAMNCEMHAST*

FI19905.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24538-PA 508 GF24538-PA 1..483 1..490 1087 43.7 Plus
Dana\GF24540-PA 537 GF24540-PA 1..531 1..489 925 37.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13911-PA 499 GG13911-PA 1..499 1..497 2301 84 Plus
Dere\GG13912-PA 489 GG13912-PA 1..484 1..489 1023 43.3 Plus
Dere\GG13910-PA 492 GG13910-PA 1..491 1..497 990 43.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16635-PA 493 GH16635-PA 1..487 1..490 1077 44.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG33489-PB 497 CG33489-PB 1..497 1..497 2673 100 Plus
CG33489-PA 497 CG33489-PA 1..497 1..497 2673 100 Plus
CG33490-PA 530 CG33490-PA 1..524 1..489 960 40.6 Plus
CG32086-PA 491 CG32086-PA 1..488 1..495 947 44 Plus
CG32086-PB 475 CG32086-PB 1..472 1..495 896 42.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11592-PA 499 GI11592-PA 1..496 1..497 1072 45 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:25:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22816-PA 502 GL22816-PA 1..491 1..489 1181 48.5 Plus
Dper\GL22850-PA 473 GL22850-PA 1..456 1..488 966 43.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:25:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23871-PA 502 GA23871-PA 1..491 1..489 1193 48.9 Plus
Dpse\GA23893-PA 498 GA23893-PA 1..481 1..488 1054 45.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24739-PA 497 GM24739-PA 1..497 1..497 2572 94.6 Plus
Dsec\GM24736-PA 491 GM24736-PA 1..488 1..495 1000 43.7 Plus
Dsec\GM24740-PA 206 GM24740-PA 1..205 1..206 466 47.4 Plus
Dsec\GM24741-PA 255 GM24741-PA 2..250 277..489 388 37.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:25:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12799-PA 497 GD12799-PA 1..496 1..496 2567 94.6 Plus
Dsim\GD12796-PA 491 GD12796-PA 1..490 1..497 988 43.2 Plus
Dsim\GD12800-PA 529 GD12800-PA 1..524 1..489 971 41.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11272-PA 497 GJ11272-PA 2..487 3..490 1115 46 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:25:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17019-PA 495 GK17019-PA 1..487 1..490 969 40.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20205-PA 497 GE20205-PA 1..495 1..493 2308 85.1 Plus
Dyak\GE20201-PA 490 GE20201-PA 1..488 1..496 1007 43.8 Plus
Dyak\GE20206-PA 468 GE20206-PA 1..463 1..489 936 41.1 Plus

FI19905.hyp Sequence

Translation from 195 to 1688

> FI19905.hyp
MANKGHFIERNGAFRAAGLPSFGDDKISFKDCVIIAHPSEEIRHQLELEC
RRNKPQPFGKLSPILPESKMGELLSSEGQKSRVAVFKEKFLEDMYCKFGK
TGQIQPTHSKPDDVTNWSHTFGRANPPAETLYSTIMPKKSADQVNREYAE
FHRGHIVSNNHYFPSEQINRRYDKPFDRLNTYGVLQGAEHSGSTMKKCLM
QGDEHLTVVSKPWMDYVQKTKAPLGKKYEKYLDKVPDVFFGYRPHTDKCT
IRMLLEDIRPCEEDNSLVMALSYLNRLRESLHKRNDFYMMDLIASLERED
KEHTGHMPLSQILGTMYKLHIRVDAAKIRTMLSHFGKILDEGCPTERVNY
DHFCRILSVQQPLPNVGCIGHIPDNMYNKETTYTKLCKDRMADIPVSPEF
NWPNRSAHRTDDINTHVKDVIQPELPIKVGLRPSDKTWPRSKDQIERIFD
NIVSKDAFENIWQRIMAKKKTNDQDLKELASVAQFRAAMNCEMHAST*

FI19905.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:31:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG33489-PB 497 CG33489-PB 1..497 1..497 2673 100 Plus
CG33489-PA 497 CG33489-PA 1..497 1..497 2673 100 Plus
CG33490-PA 530 CG33490-PA 1..524 1..489 960 40.6 Plus
CG32086-PA 491 CG32086-PA 1..488 1..495 947 44 Plus
CG32086-PB 475 CG32086-PB 1..472 1..495 896 42.7 Plus