Clone FI19911 Report

Search the DGRC for FI19911

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:199
Well:11
Vector:pOTB7
Associated Gene/TranscriptCG16935-RA
Protein status:FI19911.pep: gold
Sequenced Size:1334

Clone Sequence Records

FI19911.complete Sequence

1334 bp assembled on 2012-03-21

GenBank Submission: BT133326.1

> FI19911.complete
CGTTTGTCGCTTAGCCAAAAATACCAGCAAATAACATTATAAATCTCTTT
GGTGTCATTAAAAATCAAGTTGGCAGCAATGTAGCGACGGTCATACTAAC
CTGCATAATAATTTTCGTTTTACTCTTTTGATGGTCAAAAATCATAACTA
CTACTAACAAATGTTGCGCAGAGGCTTTTTATCTCGCATCAACGCAGCCC
AATGGAGCCGCCAAATGTCGGTGGTGGCCAAGTCCTTGAAGTACACACAG
CACGGCGAACCACAGGAGGTTCTGCAACTGGTGGAGGACAAACTTCCCGA
TCCCAAGGACAATCAGGTGCTGGTGAAGATTCTGGCAGCTCCCATTAACC
CGGCGGACATAAACACCATTCAGGGTAAATACCCGGTGAAGCCCAAGTTT
CCAGCCGTTGGCGGCAATGAGTGTGTGGCGGAGGTCATCTGCGTGGGCGA
CAAAGTCAAAGGCTTTGAGGCAGGACAGCACGTCATTCCCTTGGCCAGTG
GCCTGGGCACCTGGACCACCCATGCCGTCTACAAGGAGGATCAACTATTG
ATCGTGTCCAAGAAGGTTGGCTTGGCGGAGGCCGCCACCTCGACAGTGAA
TCCCACCACTGCCTACCGAATGCTAAAGGACTTTGTGCAGCTCTGTCCGG
GTGACACGGTCATCCAAAACGGCGCCAATAGCGCCGTCGGCCAGGCAGTG
CACCAATTGTGCCGAGCCTGGGGCATCAATAGCGTTGGCATTGTACGCGA
CCGCCCAGAAATTGCCGAATTGAAGCAGATGCTGCAGTGCCTGGGAGCCA
CCGAGGTCCTAACAGAGGCCGAAATTCGCACCAGTGACATCTTCAAGTCG
GGCAAGTTGAAAAAGCCCCGTCTGGCCTTCAACTGTGTGGGCGGAAAAAG
CGCCACGGAGGTGTCGCGTCATCTAGACAATGGCGGAGTGCTGGTCACCT
ACGGCGGAATGTCCCGCGAACCCGTCACAGTGGCCACTGGACCCCTCATT
TTCAAGGACATTGCATTTAGAGGCTTCTGGATGACTCGCTGGTCCAAGGA
GAACTACAGTTCACCAGAGCGTTCGAAAATGTTCAAGGAGATCTTCGAGC
TGATGGAGCAGGGAAAGTTCGTGGCCCCCAACCATGAGATGGTGCCCTTG
GCAAAGTTCAAAGACGCGGCGGCCGCTGCCTTGAGCTTCAAGGGATTCAC
CGGCAAGAAGTACATACTGGATATGAGCATTTAGATGCGTAACTCGAGGC
TAAGCCTGCTGTTTATTTACATATACGACTTGTGTATTAAAATTGTTATC
TACTGTGATACACTTTAAAAAAAAAAAAAAAAAA

FI19911.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:08:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 9747700..9748642 1316..374 4715 100 Minus
chr2R 21145070 chr2R 9748977..9749353 377..1 1840 99.2 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13860348..13861291 1317..374 4720 100 Minus
2R 25286936 2R 13861626..13862002 377..1 1825 98.9 Minus
Blast to na_te.dros performed on 2019-03-15 13:07:59 has no hits.

FI19911.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:09:10 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 9747700..9748641 375..1316 100 <- Minus
chr2R 9748980..9749353 1..374 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-21 20:15:22 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
CG16935-RA 1..1074 161..1234 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:34 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
CG16935-RA 1..1074 161..1234 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:21:58 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
CG16935-RA 1..1074 161..1234 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-21 20:15:21 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
CG16935-RA 1..1316 1..1316 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:34 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
CG16935-RA 1..1316 1..1316 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:21:58 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
CG16935-RA 1..1316 1..1316 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:10 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13860349..13861290 375..1316 100 <- Minus
2R 13861629..13862002 1..374 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:10 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13860349..13861290 375..1316 100 <- Minus
2R 13861629..13862002 1..374 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:10 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13860349..13861290 375..1316 100 <- Minus
2R 13861629..13862002 1..374 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:34 Download gff for FI19911.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9747854..9748795 375..1316 100 <- Minus
arm_2R 9749134..9749507 1..374 98   Minus

FI19911.hyp Sequence

Translation from 160 to 1233

> FI19911.hyp
MLRRGFLSRINAAQWSRQMSVVAKSLKYTQHGEPQEVLQLVEDKLPDPKD
NQVLVKILAAPINPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVK
GFEAGQHVIPLASGLGTWTTHAVYKEDQLLIVSKKVGLAEAATSTVNPTT
AYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQLCRAWGINSVGIVRDRPE
IAELKQMLQCLGATEVLTEAEIRTSDIFKSGKLKKPRLAFNCVGGKSATE
VSRHLDNGGVLVTYGGMSREPVTVATGPLIFKDIAFRGFWMTRWSKENYS
SPERSKMFKEIFELMEQGKFVAPNHEMVPLAKFKDAAAAALSFKGFTGKK
YILDMSI*

FI19911.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:21:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG16935-PB 357 CG16935-PB 1..357 1..357 1845 100 Plus
CG16935-PA 357 CG16935-PA 1..357 1..357 1845 100 Plus

FI19911.pep Sequence

Translation from 160 to 1233

> FI19911.pep
MLRRGFLSRINAAQWSRQMSVVAKSLKYTQHGEPQEVLQLVEDKLPDPKD
NQVLVKILAAPINPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVK
GFEAGQHVIPLASGLGTWTTHAVYKEDQLLIVSKKVGLAEAATSTVNPTT
AYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQLCRAWGINSVGIVRDRPE
IAELKQMLQCLGATEVLTEAEIRTSDIFKSGKLKKPRLAFNCVGGKSATE
VSRHLDNGGVLVTYGGMSREPVTVATGPLIFKDIAFRGFWMTRWSKENYS
SPERSKMFKEIFELMEQGKFVAPNHEMVPLAKFKDAAAAALSFKGFTGKK
YILDMSI*

FI19911.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:03:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11158-PA 339 GF11158-PA 1..338 19..356 1606 87.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22463-PA 339 GG22463-PA 1..339 19..357 1791 98.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:03:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20863-PA 357 GH20863-PA 1..356 1..356 1570 80.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG16935-PB 357 CG16935-PB 1..357 1..357 1845 100 Plus
CG16935-PA 357 CG16935-PA 1..357 1..357 1845 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:03:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20971-PA 340 GI20971-PA 1..338 19..356 1528 83.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16992-PA 356 GL16992-PA 1..354 1..355 1595 82.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:03:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24989-PA 356 GA24989-PA 1..354 1..355 1605 83.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:03:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20249-PA 339 GM20249-PA 1..339 19..357 1813 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25735-PA 359 GD25735-PA 1..359 1..357 1848 97.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:03:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20691-PA 357 GJ20691-PA 1..356 1..356 1562 82.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21344-PA 339 GK21344-PA 1..338 19..356 1544 84.9 Plus
Dwil\GK15785-PA 355 GK15785-PA 1..354 1..356 1275 64.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:03:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13334-PA 339 GE13334-PA 1..339 19..357 1786 98.2 Plus