Clone FI19917 Report

Search the DGRC for FI19917

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:199
Well:17
Vector:pOTB7
Associated Gene/TranscriptCG6083-RA
Protein status:FI19917.pep: gold
Sequenced Size:1331

Clone Sequence Records

FI19917.complete Sequence

1331 bp assembled on 2012-03-21

GenBank Submission: BT133333.1

> FI19917.complete
CAGAGCTGTCACAAGACATGCTGTTTGTAGCCAGTTTAATAGGCCTTTGA
GTATAGTTCACTTAGTAAATTACAAATTAAAGCTTTCCAAAAACGAAGCC
AGTGCAACAACATATTTCACAAGGAGCAAAAGGATTCGAACATGTCGACA
CCGAATTTTCTCTTGAGCAATGGTAAAAATATGCCTATGTTGGGTCTCGG
AACTTGGCGGAGCCCGCCGGAAGTGGTGACCCAAGCAGTAAAGGATGCCA
TTGATATAGGCTATCGCCATTTTGACTGCGCTCATATCTATGGCAATGAG
GCGCAAGTGGGAGCTGCTCTCCGGGAGAAAATGGACGAGGGAGTGGTCAC
ACGAGATGAACTCTTCATCACGAGCAAACTGTGGAACACACACCACAAGC
CGGATTTGGTGCGCCCGGCATGTGAGACAAGCATAAGGAACTTGGGAGTC
AAGTACCTAAACCTCTACCTGATGCACTGGCCCATGGCCTACAAGTCGGG
CAGTGACAACCTATATCCCACGTGTCCGGACACCAATAAGGCCGCATTCG
AGGACATCGACTATGTGGACACGTGGCGTGCAATGGAGAATCTGGTGGAC
GAGGGTCTGTGCCAGGCCATCGGTGTGTCTAACTTCAATGAGCAGCAGAT
GAATAGACTTCTGAGTGTGGCCAAACTTAAGCCGGTAGTTCTACAAATCG
AGTGCCACCCGTACCTTAGTCAGAAGCCATTGATTACGCTGTGCTATGAC
AATGCCATTGCTGTGACCGCCTACAGCTGCCTGGGATCGGGACATACGCC
CTACGAGAAGCCCGGCGCTTATCCACTGCTCCAGCACCCGACCATCTTGG
CTATAGCTGAGAAATACGAAAGGACTGCGGCACAGGTGCTCCTACGCTTT
CAGACACAATCGGGTATAATTGTCATCCCAAGATCAGTAAGCAAACAGCA
CATGTTGGACAACTTTAAGCGAATCTGGGACTTTGAGTTGGCCGTCGATG
ACATACAGGCCATTAACGAATTGGACTGCAATGGGCGTTTTATGACCATG
AAGGCGGCCTATGGACATCCTCATCATCCCTTTGAACCCAAAGCCAAAGT
AGATAATTAATATTAATTAATATTAGAAGTACAAGTAGTTATTTAAACTG
ATTGCCTTTAATGTGATAAGTAAGATTGTATGCGGCGAGATCCAGAATTA
TACTGATGATGTCCAGGTACTTCCTTTATACTGAGAAGTCTAGCATAATT
ATTGTTATACAATATAATAATATAATATAATTAAACTGTTTTGCTGTGTA
TAAAATCGAAAAAAAAAAAAAAAAAAAAAAA

FI19917.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:05:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11615756..11616459 1056..353 3415 99 Minus
chr3L 24539361 chr3L 11615434..11615686 1308..1056 1190 98 Minus
chr3L 24539361 chr3L 11616822..11617031 210..1 1035 99.5 Minus
chr3L 24539361 chr3L 11616523..11616666 353..210 720 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11624850..11625553 1056..353 3430 99.1 Minus
3L 28110227 3L 11624526..11624780 1310..1056 1185 97.6 Minus
3L 28110227 3L 11625916..11626125 210..1 1020 99 Minus
3L 28110227 3L 11625617..11625760 353..210 705 99.3 Minus
Blast to na_te.dros performed 2019-03-15 13:05:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Tv1 6868 Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). 5825..5994 1109..1285 119 55.9 Plus

FI19917.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:05:56 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11615757..11616458 354..1055 99 <- Minus
chr3L 11616523..11616665 211..353 100 <- Minus
chr3L 11616822..11617031 1..210 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-21 19:20:42 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
CG6083-RA 1..969 142..1110 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:16 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
CG6083-RA 1..969 142..1110 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:21:31 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
CG6083-RA 1..969 142..1110 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-21 19:20:42 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
CG6083-RA 1..1308 1..1308 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:16 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
CG6083-RA 1..1308 1..1308 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:21:31 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
CG6083-RA 1..1308 1..1308 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:56 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11624528..11624780 1056..1308 97 <- Minus
3L 11624851..11625552 354..1055 99 <- Minus
3L 11625617..11625759 211..353 99 <- Minus
3L 11625916..11626125 1..210 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:56 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11624528..11624780 1056..1308 97 <- Minus
3L 11624851..11625552 354..1055 99 <- Minus
3L 11625617..11625759 211..353 99 <- Minus
3L 11625916..11626125 1..210 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:05:56 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11624528..11624780 1056..1308 97 <- Minus
3L 11624851..11625552 354..1055 99 <- Minus
3L 11625617..11625759 211..353 99 <- Minus
3L 11625916..11626125 1..210 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:16 Download gff for FI19917.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11617628..11617880 1056..1308 97 <- Minus
arm_3L 11617951..11618652 354..1055 99 <- Minus
arm_3L 11618717..11618859 211..353 99 <- Minus
arm_3L 11619016..11619225 1..210 99   Minus

FI19917.hyp Sequence

Translation from 141 to 1109

> FI19917.hyp
MSTPNFLLSNGKNMPMLGLGTWRSPPEVVTQAVKDAIDIGYRHFDCAHIY
GNEAQVGAALREKMDEGVVTRDELFITSKLWNTHHKPDLVRPACETSIRN
LGVKYLNLYLMHWPMAYKSGSDNLYPTCPDTNKAAFEDIDYVDTWRAMEN
LVDEGLCQAIGVSNFNEQQMNRLLSVAKLKPVVLQIECHPYLSQKPLITL
CYDNAIAVTAYSCLGSGHTPYEKPGAYPLLQHPTILAIAEKYERTAAQVL
LRFQTQSGIIVIPRSVSKQHMLDNFKRIWDFELAVDDIQAINELDCNGRF
MTMKAAYGHPHHPFEPKAKVDN*

FI19917.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:21:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG6083-PA 322 CG6083-PA 1..322 1..322 1730 100 Plus
CG6084-PA 316 CG6084-PA 1..312 1..315 890 53.3 Plus
CG6084-PC 350 CG6084-PC 38..346 4..315 859 52.2 Plus
CG6084-PD 316 CG6084-PD 1..312 1..314 847 52.1 Plus
CG6084-PB 350 CG6084-PB 38..346 4..314 816 51 Plus

FI19917.pep Sequence

Translation from 141 to 1109

> FI19917.pep
MSTPNFLLSNGKNMPMLGLGTWRSPPEVVTQAVKDAIDIGYRHFDCAHIY
GNEAQVGAALREKMDEGVVTRDELFITSKLWNTHHKPDLVRPACETSIRN
LGVKYLNLYLMHWPMAYKSGSDNLYPTCPDTNKAAFEDIDYVDTWRAMEN
LVDEGLCQAIGVSNFNEQQMNRLLSVAKLKPVVLQIECHPYLSQKPLITL
CYDNAIAVTAYSCLGSGHTPYEKPGAYPLLQHPTILAIAEKYERTAAQVL
LRFQTQSGIIVIPRSVSKQHMLDNFKRIWDFELAVDDIQAINELDCNGRF
MTMKAAYGHPHHPFEPKAKVDN*

FI19917.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:03:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24530-PA 313 GF24530-PA 1..301 14..315 1497 90.4 Plus
Dana\GF24531-PA 350 GF24531-PA 38..346 4..314 807 51.9 Plus
Dana\GF10250-PA 320 GF10250-PA 13..313 10..314 669 42.3 Plus
Dana\GF10249-PA 317 GF10249-PA 12..313 9..314 657 42.5 Plus
Dana\GF13790-PA 311 GF13790-PA 6..307 4..314 650 41.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13903-PA 320 GG13903-PA 1..316 1..316 1660 94.9 Plus
Dere\GG13904-PA 373 GG13904-PA 58..369 1..314 814 51.7 Plus
Dere\GG14236-PA 320 GG14236-PA 9..313 6..314 658 42.1 Plus
Dere\GG14235-PA 316 GG14235-PA 11..312 9..314 654 43.1 Plus
Dere\GG10801-PA 311 GG10801-PA 6..307 4..314 647 41.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:03:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16629-PA 321 GH16629-PA 1..313 1..315 1466 84.4 Plus
Dgri\GH16631-PA 318 GH16631-PA 4..314 2..314 791 49.4 Plus
Dgri\GH15710-PA 317 GH15710-PA 12..313 9..314 687 42.8 Plus
Dgri\GH20139-PA 311 GH20139-PA 5..307 3..314 642 42.2 Plus
Dgri\GH16848-PA 385 GH16848-PA 35..344 1..315 602 38.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG6083-PA 322 CG6083-PA 1..322 1..322 1730 100 Plus
CG6084-PA 316 CG6084-PA 1..312 1..315 890 53.3 Plus
CG6084-PC 350 CG6084-PC 38..346 4..315 859 52.2 Plus
CG6084-PD 316 CG6084-PD 1..312 1..314 847 52.1 Plus
CG6084-PB 350 CG6084-PB 38..346 4..314 816 51 Plus
CG12766-PA 320 CG12766-PA 9..313 6..314 647 42.4 Plus
CG9436-PA 311 CG9436-PA 6..307 4..314 645 42 Plus
CG10638-PD 317 CG10638-PD 5..313 4..314 640 40.6 Plus
CG10638-PA 317 CG10638-PA 5..313 4..314 640 40.6 Plus
CG10863-PA 316 CG10863-PA 11..312 9..314 632 42.5 Plus
ARY-PD 384 CG40064-PD 36..345 1..315 578 38.9 Plus
CG10638-PB 310 CG10638-PB 5..310 4..314 568 38.1 Plus
ARY-PC 366 CG40064-PC 49..327 32..315 532 39.6 Plus
CG2767-PA 329 CG2767-PA 2..319 1..313 514 35.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11588-PA 328 GI11588-PA 1..314 1..315 1509 86.7 Plus
Dmoj\GI11589-PA 318 GI11589-PA 4..314 2..314 820 52.1 Plus
Dmoj\GI13068-PA 317 GI13068-PA 5..313 4..314 662 41.2 Plus
Dmoj\GI12765-PA 317 GI12765-PA 12..313 9..314 657 42.2 Plus
Dmoj\GI20232-PA 311 GI20232-PA 5..307 3..314 627 40.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22807-PA 355 GL22807-PA 1..344 1..316 1313 73.9 Plus
Dper\GL22808-PA 318 GL22808-PA 4..314 2..315 906 55.1 Plus
Dper\GL24949-PA 440 GL24949-PA 154..436 30..314 653 43.2 Plus
Dper\GL10976-PA 311 GL10976-PA 5..307 3..314 648 41.7 Plus
Dper\GL16200-PA 317 GL16200-PA 12..313 9..314 628 41.4 Plus
Dper\GL24949-PA 440 GL24949-PA 5..124 4..123 285 43.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19341-PA 326 GA19341-PA 1..315 1..316 1470 83.2 Plus
Dpse\GA19342-PA 318 GA19342-PA 4..314 2..315 898 54.5 Plus
Dpse\GA23569-PA 317 GA23569-PA 31..313 30..314 649 42.9 Plus
Dpse\GA21786-PA 311 GA21786-PA 5..307 3..314 648 41.7 Plus
Dpse\GA10606-PA 317 GA10606-PA 12..313 9..314 630 41.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24728-PA 320 GM24728-PA 1..316 1..316 1692 97.8 Plus
Dsec\GM24729-PA 373 GM24729-PA 58..369 1..314 770 52.1 Plus
Dsec\GM14028-PA 320 GM14028-PA 9..313 6..314 672 43 Plus
Dsec\GM14027-PA 316 GM14027-PA 11..312 9..314 656 43.1 Plus
Dsec\GM24650-PA 544 GM24650-PA 260..540 32..314 600 40.7 Plus
Dsec\GM24650-PA 544 GM24650-PA 4..253 3..256 516 41.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12788-PA 320 GD12788-PA 1..316 1..316 1700 98.1 Plus
Dsim\GD12789-PA 350 GD12789-PA 38..346 4..314 738 51 Plus
Dsim\GD13309-PA 320 GD13309-PA 9..313 6..314 675 43 Plus
Dsim\GD13308-PA 316 GD13308-PA 11..312 9..314 658 43.1 Plus
Dsim\GD10303-PA 311 GD10303-PA 6..307 4..314 651 41.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11266-PA 321 GJ11266-PA 1..317 1..318 1491 85.5 Plus
Dvir\GJ11267-PA 352 GJ11267-PA 38..348 2..314 820 51.9 Plus
Dvir\GJ20182-PA 311 GJ20182-PA 6..307 4..314 655 42.6 Plus
Dvir\GJ13816-PA 317 GJ13816-PA 4..313 3..314 653 40.8 Plus
Dvir\GJ16106-PA 318 GJ16106-PA 13..314 9..314 653 42.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:03:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17013-PA 323 GK17013-PA 1..314 1..315 1363 79.7 Plus
Dwil\GK14636-PA 318 GK14636-PA 4..314 2..315 877 53.5 Plus
Dwil\GK17015-PA 318 GK17015-PA 6..314 4..314 839 53.2 Plus
Dwil\GK22153-PA 311 GK22153-PA 5..307 3..314 662 42.5 Plus
Dwil\GK16694-PA 314 GK16694-PA 1..310 1..314 651 43.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:03:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20194-PA 320 GE20194-PA 1..316 1..316 1670 95.9 Plus
Dyak\GE20195-PA 350 GE20195-PA 38..346 4..314 739 50.6 Plus
Dyak\GE20664-PA 320 GE20664-PA 9..313 6..314 658 42.1 Plus
Dyak\GE20663-PA 316 GE20663-PA 11..312 9..314 648 43.1 Plus
Dyak\GE24510-PA 311 GE24510-PA 5..307 3..314 642 40.6 Plus