Clone FI19924 Report

Search the DGRC for FI19924

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:199
Well:24
Vector:pOTB7
Associated Gene/TranscriptCG2224-RA
Protein status:FI19924.pep: gold
Sequenced Size:1717

Clone Sequence Records

FI19924.complete Sequence

1717 bp assembled on 2012-03-21

GenBank Submission: BT133327.1

> FI19924.complete
GACAAAACAAAAAGTTAACGTTCGTTTCAAAACCCGATAATCCTCTTGTT
ACTATTACCATCGATTAGTATCGATAGGACGTCGATGACTCTTTGCGGTC
AATCGCACACAGCTGACTGCGTGGGAGAACAGCTGTTTCCAGCTTTTTCA
GAGGACGCCCTGCGTAATTATGAGTAATTTTGCACTCGAGAAGATTGTGG
AATAGCGCTTGATTGACAACCTAGAGTACGTCCAGTCCGCACGAGCACTA
AGCCAAGACAATACGCAAGGGAATCCAGGAAACACGGCAGTGGAAAGCGC
GAGGAAGAGCTGGAACTTCGGGAGGAGCAAGTGAAACCATGTCGAAGGCT
GTGAATAACATGAGCATGGGCGACGTGGAGCCGCAGGAGAGGATGAAGCA
CCTGTCGCACTGCGGCAACCTGATCGAGGTGGACAAGAACATGCCAGTCA
CGCGGTACTACCGCTCTGGCACCGAGATGCTGCGCATGGCCAATGTTTAC
CTGCGGGAGGGCAACCACGAGAACGCATTCATCCTGTACTTGCGCTACAT
GACCCTCTTCATCGAGAAGATCCGCCAGCACCCGGATTATGGCAGCGTCA
AGGCCGAGGTGCGGGATATTAACAGGAAGATTAAGGACGAGATTATGCCC
ACGACGGAGAAACTGAGAGCCAAGCTACTAACGCACTACCAAAGGGAGTA
CGAGCAGTTCCTGGCCAGCAAGGAGGCGGAACGAGTCAAGGAACTGGAAC
GCGAACGGGAACGGGAAAGGGAACGTCAGCGGCAGAAGGAAAGGGAGAAG
GCAGGTTCAAGTGCTATCCCATCCCTCATCCCGGCCAATTTGCACGTGCT
CATCGACGAAGGCAACCAGCCATCGGCTCCAGACCTGGGCCTGCTTGACC
AGGTGGTCTATCCCAATGACTTTCCCACGGGCGCCAATCGCAGCCTGCCG
GGATCGGGACTCCTGCTGCCCGCTGCCAGCGAAGCAGCCGCCGATAAGAC
AACCAACTCCAAGCCAAGCTTCGATCGCAATCAGAAGCCATCTTACAACC
GCACAGATTCTCTGCTGGCTGGCTCTTTGCGCCTTGTTTACGTGCCCGGG
GACACCATGGAGGTGTTTCTGAAGCTGGCCCTTGCCAACACCTCGAAAAA
CATCGAGACATGCGGCGTACTGGCTGGTCATCTGTCCCAGAACCAGCTGT
ACATCACTCACATCATTACGCCGCAACAGCAAGGAACTCCGGACAGCTGC
AACACGATGCACGAGGAGCAGATATTCGATGTGCAGGACCAGATGCAGCT
GATTACGCTGGGATGGATTCATACTCATCCAACTCAGACTGCGTTTTTGT
CCTCCGTTGACCTGCATACGCATTGCTCCTATCAGATTATGATGCCCGAA
GCCTTGGCCATTGTGTGCGCGCCTAAGTACAATACTACTGGTTTCTTTAT
ACTCACGCCACATTACGGTCTGGACTACATAGCCCAATGTCGCCAGTCGG
GCTTTCATCCGCATCCTAATGACCCGCCGCTCTTCATGGAGGCGCAGCAC
ATCCGAATGGATAACCAGGCCAAAATCAAGGTCATCGATCTGCGGAGATA
GTCACTCAAAAGCACCGATCCATCAGATCTAGCAATAGCTCCAGTTTCGG
TTGTCAAACAGTGATGTACCATGGAAATTACAGAGATTTAGGCAGATAGA
AAAAAAAAAAAAAAAAA

FI19924.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26280802..26281354 1006..454 2660 98.7 Minus
chr3R 27901430 chr3R 26281455..26281910 456..1 2190 98.7 Minus
chr3R 27901430 chr3R 26279999..26280314 1322..1007 1580 100 Minus
chr3R 27901430 chr3R 26279497..26279760 1699..1436 1305 99.6 Minus
chr3R 27901430 chr3R 26279828..26279940 1435..1323 565 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:08:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30458271..30458823 1006..454 2660 98.7 Minus
3R 32079331 3R 30458924..30459379 456..1 2220 99.1 Minus
3R 32079331 3R 30457463..30457778 1322..1007 1565 99.7 Minus
3R 32079331 3R 30456960..30457224 1700..1436 1325 100 Minus
3R 32079331 3R 30457292..30457404 1435..1323 535 98.2 Minus
Blast to na_te.dros performed 2019-03-15 13:08:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 2094..2170 720..795 120 66.7 Plus

FI19924.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:09:13 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26279497..26279760 1436..1699 99 <- Minus
chr3R 26279828..26279940 1323..1435 100 <- Minus
chr3R 26279999..26280314 1007..1322 100 <- Minus
chr3R 26280802..26281353 455..1006 98 <- Minus
chr3R 26281457..26281910 1..454 98   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-21 20:15:23 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
CG2224-RA 1..1263 339..1601 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:57:38 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
CG2224-RA 1..1263 339..1601 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:22:05 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
CG2224-RA 1..1263 339..1601 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-21 20:15:23 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
CG2224-RA 10..1708 1..1699 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:57:38 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
CG2224-RA 1..1620 80..1699 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:22:05 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
CG2224-RA 1..1620 80..1699 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:13 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30458926..30459379 1..454 99   Minus
3R 30456961..30457224 1436..1699 100 <- Minus
3R 30457292..30457404 1323..1435 98 <- Minus
3R 30457463..30457778 1007..1322 99 <- Minus
3R 30458271..30458822 455..1006 98 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:13 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30458926..30459379 1..454 99   Minus
3R 30456961..30457224 1436..1699 100 <- Minus
3R 30457292..30457404 1323..1435 98 <- Minus
3R 30457463..30457778 1007..1322 99 <- Minus
3R 30458271..30458822 455..1006 98 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:13 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30458926..30459379 1..454 99   Minus
3R 30456961..30457224 1436..1699 100 <- Minus
3R 30457292..30457404 1323..1435 98 <- Minus
3R 30457463..30457778 1007..1322 99 <- Minus
3R 30458271..30458822 455..1006 98 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:57:38 Download gff for FI19924.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26283185..26283500 1007..1322 99 <- Minus
arm_3R 26282683..26282946 1436..1699 100 <- Minus
arm_3R 26283014..26283126 1323..1435 98 <- Minus
arm_3R 26283993..26284544 455..1006 98 <- Minus
arm_3R 26284648..26285101 1..454 99   Minus

FI19924.hyp Sequence

Translation from 338 to 1600

> FI19924.hyp
MSKAVNNMSMGDVEPQERMKHLSHCGNLIEVDKNMPVTRYYRSGTEMLRM
ANVYLREGNHENAFILYLRYMTLFIEKIRQHPDYGSVKAEVRDINRKIKD
EIMPTTEKLRAKLLTHYQREYEQFLASKEAERVKELERERERERERQRQK
EREKAGSSAIPSLIPANLHVLIDEGNQPSAPDLGLLDQVVYPNDFPTGAN
RSLPGSGLLLPAASEAAADKTTNSKPSFDRNQKPSYNRTDSLLAGSLRLV
YVPGDTMEVFLKLALANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGT
PDSCNTMHEEQIFDVQDQMQLITLGWIHTHPTQTAFLSSVDLHTHCSYQI
MMPEALAIVCAPKYNTTGFFILTPHYGLDYIAQCRQSGFHPHPNDPPLFM
EAQHIRMDNQAKIKVIDLRR*

FI19924.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG2224-PB 420 CG2224-PB 1..420 1..420 2201 100 Plus
CG2224-PA 420 CG2224-PA 1..420 1..420 2201 100 Plus

FI19924.pep Sequence

Translation from 338 to 1600

> FI19924.pep
MSKAVNNMSMGDVEPQERMKHLSHCGNLIEVDKNMPVTRYYRSGTEMLRM
ANVYLREGNHENAFILYLRYMTLFIEKIRQHPDYGSVKAEVRDINRKIKD
EIMPTTEKLRAKLLTHYQREYEQFLASKEAERVKELERERERERERQRQK
EREKAGSSAIPSLIPANLHVLIDEGNQPSAPDLGLLDQVVYPNDFPTGAN
RSLPGSGLLLPAASEAAADKTTNSKPSFDRNQKPSYNRTDSLLAGSLRLV
YVPGDTMEVFLKLALANTSKNIETCGVLAGHLSQNQLYITHIITPQQQGT
PDSCNTMHEEQIFDVQDQMQLITLGWIHTHPTQTAFLSSVDLHTHCSYQI
MMPEALAIVCAPKYNTTGFFILTPHYGLDYIAQCRQSGFHPHPNDPPLFM
EAQHIRMDNQAKIKVIDLRR*

FI19924.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:03:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23335-PA 417 GF23335-PA 1..416 1..419 1916 88.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11934-PA 424 GG11934-PA 1..424 1..420 2244 97.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17430-PA 419 GH17430-PA 1..419 1..420 1848 84.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG2224-PB 420 CG2224-PB 1..420 1..420 2201 100 Plus
CG2224-PA 420 CG2224-PA 1..420 1..420 2201 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:03:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22758-PA 419 GI22758-PA 1..419 1..420 1808 79.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:03:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14046-PA 278 GL14046-PA 1..222 1..221 931 87 Plus
Dper\GL14046-PA 278 GL14046-PA 245..278 387..420 162 85.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:03:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15312-PA 421 GA15312-PA 1..421 1..420 1982 89.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12153-PA 420 GM12153-PA 1..420 1..420 2265 99.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:03:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17057-PA 420 GD17057-PA 1..420 1..420 2274 99.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:03:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22760-PA 418 GJ22760-PA 1..418 1..420 1853 82.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:03:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13127-PA 422 GK13127-PA 1..422 1..420 1866 84.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:03:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23385-PA 420 GE23385-PA 1..420 1..420 2263 99 Plus