Clone FI20010 Report

Search the DGRC for FI20010

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:200
Well:10
Vector:pFlc-1
Associated Gene/Transcriptkrimp-RA
Protein status:FI20010.pep: gold
Sequenced Size:2545

Clone Sequence Records

FI20010.complete Sequence

2545 bp assembled on 2012-04-09

GenBank Submission: BT133395.1

> FI20010.complete
GCCTTCTCTTCCTCTTGCTTTTGCGCCGAATATTTTCTTTAAACTGTTTT
CGTATTAAATTGTTTGTTTAAAATGAATCTGGAGGACATTTCGATGATTA
TGAAGCTGTTCGATAGCAACATGCACAAGCTACAGGGGAATCTACGTTCC
TATCAAACCGAAATGCATCAAATTCACAAGGAGCTCACAGAAAAATTGTC
GCATGCAGATCTGCTGTACAGGAGTCTCATTCCGCTGCACGATCACTTGG
TGGCCAGTCTGAGCGAAGTTAATGCACACGTAATGAAACTGAATGTGCAA
CTACACATCAACCGCCAGTCTGTCAGATTGGGAGACTACGAATATTACGA
GAAATCCATCGACAATCCATATTCGTCGATTCGCTCAGGTTTACAAGCGA
TCGAAAAACCGGGTTGTGCTGAAGCTATATGTCAGTCCTCGAAGCCGGCC
TTCGTGGAATGTCTGCCCTCCTCCACTTCGGAGGAAGTGCCCGTCGTGGC
TGTGCAGGAAGCCTCTTCGACAAACCAGCTCGACGCAATATCAGTGGTCA
ATGAAAACCTCTCAGAAGAGAGAGACGCTACTCCGCAGCCTTTAGCAGTT
TCCAAGAACATGGAGGAGACTATGCCCTCGAATCCTTTCCACGAACAGCT
TGAGGGATCTCTAGAAGAGATCCCAGTGGGCTCCAAGATTGTCGTGGAAA
CTGAAAAGGCCAACAATCCAGTACGTTCCGAAGCTTCCGCTCCAGCAACT
TCTGACAATCAGTCCCTTCTGGCTGCAAAACAGGGAACTCAAACAATTGG
CACAGGTATCTGCAACAAGATCTCCAAGAGCACCATCAACATGCCCAACA
ACTGGCAGCTTGAGAATCCTACTGAGGTAACTGCTGCATCGATCGAAAAG
GTTAACAAGCTCCCAAAAAGTCCCAGAAACCGATTCCTATTGCCTCCCAA
GGGAGGCACTGAGACGACCAGACGTGATATCTACAATCAAATCTTAAAGG
ACATGGCTGCATTTCCAGAGAATACTATAGTTACTGCCGTTTTAGCGAGC
GTGGACGTAACGGATAATTGCGCCTATGTGGCTAAATGGGATGAAAGTTC
TGATAGGATTAAGAAGGTGCTCCAGCGACAACTGCCATTGCAGGAGTTGG
ACCAGTTGCCCGACTACGGCGACATTTTTGCAGTTCTCGACAGTATTAAC
AACATCATTACTCGGATCACCATCAACTCAAGTTCTGCGGGCGGAGGATA
TGATGCGTATCTTATCGACTTTGGCGAGCATATTCATTTTGACGGCAACG
AAACAATATTTAAACTACCGGACGACATCAAACGGTTGCCGGCACAGGCC
ATTAGATGCGATTTAATCAACTGTGATATCGCCAATATGCATTGCTTTGT
TAATACGTATATTAAGATTCGAGTGCACGAAAACAATAATTCTACACTAG
TGGCCGAACCGGTCATTGATAGGTTAAGCAGACCTACAAAAACGAACACC
ACTAAATATCCAGCTGGAATAACCGAGGATGACATGGCCATGCTGAATGA
AATCGATGAGAGCACCAGTGATCCTCTGAAAGCAGTTCTTGGCTTTCGTC
CCAAGGACGAGCAACGCATTTGCCGGCACTACGATCCCAAGCTGAATGGC
TGTTTTAAGGGTAACAATTGTCGTTTTGCTCATGAGCCCTTTGCTCCGAA
TGGCGCCACCAAAGATGTGGAGCTAGCTAGAGCTCTTCCTGAGACAATCT
TTGATACAACAGTGCATTTTGAAATCGGCAGCATTGTCGGCATCCTGATC
ACCTTTATTAATGGCCCCACCGAGGTTTATGGCCAGTTTTTGGACGGATC
TCCGCCGTTGGTGTGGGACAAAAAGGATGTGCCAGAGAACAAACGGACCT
TCAAGTCGAAACCGCGTCTTCTTGACATTGTACTTGCTCTCTACAGTGAT
GGTTGCTTCTATCGCGCCCAGATAATCGATGAATTCCCCAGTGAGTACAT
GATCTTCTATGTGGATTACGGCAACACGGAGTTCGTGCCCCTAAGCTGCT
TGGCTCCATGTGAAAACGTGGACAGCTTTAAGCCCCACCGCGTCTTTAGT
TTTCACATTGAGGGAATTGTAAGGTCAAAAAATCTGACACACCAAAAGAC
AATCGAATGCATCGAGTATCTCAAGAGTAAGCTGCTAAACACGGAGATGA
ATGTACATCTGGTACAGCGCCTACCGGATGGCTTCCTAATTCGCTTCCTG
GACGATTGGAAATATATACCTGAACAGCTATTGCAACGCAACTACGCTCA
GGTTAGCCAATAAGTCGGGATAAGTCGTCGGAATAATGTTAATCAAATTT
AAAGTAGACATAGTTTACATAACAATAGTTCCTAAGCTATTTGTAAGCTT
TTCATTTCTGACCATGTTACAATTTAACCACTTACATTATCATGACAATG
CTTACATTTCTTTCGAAGGACTCTTTTTGTTTTTGAATTATCACTACTTC
GGAGCGATCCCAATAAACTGACTATGTTCAAAAAAAAAAAAAAAA

FI20010.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:34:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 12126376..12128039 1664..1 8320 100 Minus
chr2R 21145070 chr2R 12125440..12126309 2529..1660 4350 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:14
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16239054..16240717 1664..1 8320 100 Minus
2R 25286936 2R 16238118..16238987 2529..1660 4350 100 Minus
Blast to na_te.dros performed on 2019-03-15 13:34:15 has no hits.

FI20010.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:34:57 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 12125440..12126308 1661..2529 100 <- Minus
chr2R 12126380..12128039 1..1660 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-09 18:24:41 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
krimp-RA 1..2241 73..2313 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:04:54 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
krimp-RA 1..2241 73..2313 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:33:47 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
krimp-RA 1..2241 73..2313 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-09 18:24:41 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
krimp-RA 1..2529 1..2529 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:04:54 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
krimp-RA 6..2534 1..2529 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:33:47 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
krimp-RA 6..2534 1..2529 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:57 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16238118..16238986 1661..2529 100 <- Minus
2R 16239058..16240717 1..1660 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:57 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16238118..16238986 1661..2529 100 <- Minus
2R 16239058..16240717 1..1660 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:34:57 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16238118..16238986 1661..2529 100 <- Minus
2R 16239058..16240717 1..1660 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:04:54 Download gff for FI20010.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12125623..12126491 1661..2529 100 <- Minus
arm_2R 12126563..12128222 1..1660 100   Minus

FI20010.hyp Sequence

Translation from 72 to 2312

> FI20010.hyp
MNLEDISMIMKLFDSNMHKLQGNLRSYQTEMHQIHKELTEKLSHADLLYR
SLIPLHDHLVASLSEVNAHVMKLNVQLHINRQSVRLGDYEYYEKSIDNPY
SSIRSGLQAIEKPGCAEAICQSSKPAFVECLPSSTSEEVPVVAVQEASST
NQLDAISVVNENLSEERDATPQPLAVSKNMEETMPSNPFHEQLEGSLEEI
PVGSKIVVETEKANNPVRSEASAPATSDNQSLLAAKQGTQTIGTGICNKI
SKSTINMPNNWQLENPTEVTAASIEKVNKLPKSPRNRFLLPPKGGTETTR
RDIYNQILKDMAAFPENTIVTAVLASVDVTDNCAYVAKWDESSDRIKKVL
QRQLPLQELDQLPDYGDIFAVLDSINNIITRITINSSSAGGGYDAYLIDF
GEHIHFDGNETIFKLPDDIKRLPAQAIRCDLINCDIANMHCFVNTYIKIR
VHENNNSTLVAEPVIDRLSRPTKTNTTKYPAGITEDDMAMLNEIDESTSD
PLKAVLGFRPKDEQRICRHYDPKLNGCFKGNNCRFAHEPFAPNGATKDVE
LARALPETIFDTTVHFEIGSIVGILITFINGPTEVYGQFLDGSPPLVWDK
KDVPENKRTFKSKPRLLDIVLALYSDGCFYRAQIIDEFPSEYMIFYVDYG
NTEFVPLSCLAPCENVDSFKPHRVFSFHIEGIVRSKNLTHQKTIECIEYL
KSKLLNTEMNVHLVQRLPDGFLIRFLDDWKYIPEQLLQRNYAQVSQ*

FI20010.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:32:06
Subject Length Description Subject Range Query Range Score Percent Strand
krimp-PA 746 CG15707-PA 1..746 1..746 3893 100 Plus
CG15042-PA 436 CG15042-PA 31..418 273..726 427 29.1 Plus

FI20010.pep Sequence

Translation from 72 to 2312

> FI20010.pep
MNLEDISMIMKLFDSNMHKLQGNLRSYQTEMHQIHKELTEKLSHADLLYR
SLIPLHDHLVASLSEVNAHVMKLNVQLHINRQSVRLGDYEYYEKSIDNPY
SSIRSGLQAIEKPGCAEAICQSSKPAFVECLPSSTSEEVPVVAVQEASST
NQLDAISVVNENLSEERDATPQPLAVSKNMEETMPSNPFHEQLEGSLEEI
PVGSKIVVETEKANNPVRSEASAPATSDNQSLLAAKQGTQTIGTGICNKI
SKSTINMPNNWQLENPTEVTAASIEKVNKLPKSPRNRFLLPPKGGTETTR
RDIYNQILKDMAAFPENTIVTAVLASVDVTDNCAYVAKWDESSDRIKKVL
QRQLPLQELDQLPDYGDIFAVLDSINNIITRITINSSSAGGGYDAYLIDF
GEHIHFDGNETIFKLPDDIKRLPAQAIRCDLINCDIANMHCFVNTYIKIR
VHENNNSTLVAEPVIDRLSRPTKTNTTKYPAGITEDDMAMLNEIDESTSD
PLKAVLGFRPKDEQRICRHYDPKLNGCFKGNNCRFAHEPFAPNGATKDVE
LARALPETIFDTTVHFEIGSIVGILITFINGPTEVYGQFLDGSPPLVWDK
KDVPENKRTFKSKPRLLDIVLALYSDGCFYRAQIIDEFPSEYMIFYVDYG
NTEFVPLSCLAPCENVDSFKPHRVFSFHIEGIVRSKNLTHQKTIECIEYL
KSKLLNTEMNVHLVQRLPDGFLIRFLDDWKYIPEQLLQRNYAQVSQ*

FI20010.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:26:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12657-PA 671 GF12657-PA 157..655 251..746 1418 52.9 Plus
Dana\GF12657-PA 671 GF12657-PA 1..118 1..113 186 40.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:26:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22288-PA 798 GG22288-PA 1..780 1..745 2613 66.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:26:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21057-PA 670 GH21057-PA 182..665 279..746 1208 45.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:56
Subject Length Description Subject Range Query Range Score Percent Strand
krimp-PA 746 CG15707-PA 1..746 1..746 3893 100 Plus
CG15042-PA 436 CG15042-PA 31..418 273..726 427 29.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:26:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18659-PA 842 GI18659-PA 341..830 256..743 1255 47.2 Plus
Dmoj\GI18659-PA 842 GI18659-PA 7..107 9..111 165 35 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:26:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15006-PA 259 GL15006-PA 38..244 537..743 607 55.6 Plus
Dper\GL11554-PA 503 GL11554-PA 63..259 265..482 425 40.8 Plus
Dper\GL11554-PA 503 GL11554-PA 347..492 477..626 391 56.9 Plus
Dper\GL19947-PA 106 GL19947-PA 19..89 642..724 163 42.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:26:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23171-PA 642 GA23171-PA 147..627 270..743 1178 47.2 Plus
Dpse\GA24768-PA 460 GA24768-PA 63..263 265..467 461 43.3 Plus
Dpse\GA24768-PA 460 GA24768-PA 366..430 477..539 188 62.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:26:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20076-PA 705 GM20076-PA 1..705 1..746 2849 73.7 Plus
Dsec\GM22800-PA 439 GM22800-PA 37..433 273..729 351 27 Plus
Dsec\GM13486-PA 89 GM13486-PA 19..89 515..585 285 78.9 Plus
Dsec\GM19661-PA 89 GM19661-PA 19..89 515..585 285 78.9 Plus
Dsec\GM19387-PA 89 GM19387-PA 19..89 515..585 285 78.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:26:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15225-PA 663 GD15225-PA 1..663 71..746 2683 77.7 Plus
Dsim\GD24474-PA 436 GD24474-PA 37..433 273..729 376 26.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:26:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21675-PA 698 GJ21675-PA 158..682 260..743 1273 45.4 Plus
Dvir\GJ21675-PA 698 GJ21675-PA 1..80 1..80 164 37.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:26:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20979-PA 927 GK20979-PA 281..900 133..742 1220 40.6 Plus
Dwil\GK20979-PA 927 GK20979-PA 1..90 1..90 178 41.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:26:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14084-PA 753 GE14084-PA 1..740 1..745 2495 68.2 Plus