Clone FI20012 Report

Search the DGRC for FI20012

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:200
Well:12
Vector:pFlc-1
Associated Gene/Transcripttmod-RG
Protein status:FI20012.pep: gold
Sequenced Size:3208

Clone Sequence Records

FI20012.complete Sequence

3208 bp assembled on 2012-04-18

GenBank Submission: BT133473.1

> FI20012.complete
AGTAGACCCGTGATCGTGTAATTCGCCTCGTCTCTGGTCGTTTGTATTTT
TCAGGCTAAAAGAAAGAAAATAAGAAAGAAGAAAACCCAAGCAATTCTGC
GTGTTATGTGTTATCGTTGTGATCAGTGATCCAGTGATCAAGTGAAAGTG
AACACAAGAACGTGAGAGAAAGCCAAGTGAATCAGCTCGACTCCAATCGA
AAAGGATATAAATCAGAGACAATGTCGGACATTGAGGATGTTTTCGGTGG
CTCCGCCGAGGAGACCAAGCCCGAACCCGATGCCCAGAGCAAAACCAGCG
TGGTCACCGAGCACACCGAGGAGGTGATTCCCGGCGAGACCGAGAAAATG
GTAACGGAGACCATCGATGAGGATGGCGATGTCGTGGAGGAAACCACCGA
AGTTACCCGCAAAACGGTGAAGCGCACCATGAAGATCACTGAGACTTCTG
CCACCACAAAGACAACCACGCTCACCACCCCCGCCAAACTGTATGGCAAG
GATCTGAGTGAGTACGATGATGTGGATGTGGAGAGCCTGCTGGCCCAGCT
CTCCCCCGAGGAGATAACCATACTGGCCAAAGAAGTGGATCCCGATGACA
ACTTCCTGCCGCCAGACCAGCGCAATAGCTATGAGTGCACCAAGGAAGCC
ACCGGGCCTCTCAATCGCAAGCAGCTGATCGAGCACATCAATAAGCAGGC
CATCGAGACCCCGGATCAGCCGGAGTTCGAGCCGTTCGTTCAGGGCAAGG
TTCGTGGAAAGAAGTGGGTCCCACCGCCAAGGGATGCCCGCGACATCGAG
GCCGAAGAACAAATCGCCATTGACATGGGCGAGGAGTACGAACACGCCCT
TAACGATGCCACGCAGGAGGAGATCATCGATCTGGCCGCCATCCTCGGCT
TCCACTCGATGATGAATCAGGACCAGTACCACGCCTCCTTGCTCAACAAG
GGTCAGCCCGTGGGCCTGGGATGGGATGGCATTACGAAATCCACTCAGCA
GAAGCTCTTCCCTATGGATCCGCCCAACAACACAGATGTGGAGGAATCCA
TCAAGCGGGTCAAGGACGATGACTCCAAGCTGATTGACCTCAACTTGAAC
AACATTAAGAACATCTCGGACGAGAAACTCGAGCAACTGTTTGCCGCACT
GCCTCAGAACGAACATTTGGAAGTCCTCTCGCTAACAAATGTGGGCCTCA
CCGACAAGACAGCCCTCCTGTTAGCCGCGGCCATAGAGAAGAGCAAAACC
CTGAGAGTATTAAATGTCGAGACCAACTTTATCAGTCCGCCCGTGATTGT
TAAGTTGGTGCAAGCCCTGCTCAAGTGCCACACCATCGAGGAGTTTAGGG
CCTCCAATCAGCGGTCTGCGGTTCTGGGCAACAAGATCGAGATGGAAATC
ACCGACCTGGTGGAGAAGAACTCGTCGCTGCTGCGCCTTGGCTTGCACCT
GGAGTTCAACGACGCCCGCCACCGAGTGGCCGCTCACCTGCAGCGCAACA
TCGACAGAATCTTCCGCGTTCAGAAACTAAAGCCCAATCTACCCAAGTTG
ATCCTGCCGGGCAACATGGAGATTGAGCGGGATCTGGTCGCCTATAACCG
ATCGGCCACGCCTTCTCCGTCGCCATCTCCGCAGCCTCCAGTGGATTATG
AAGTGGAAGAGGACCCGGATAACATGGTTATCCGGGGTGGCGGCGATGCC
TTCGATCCGGATGTCGATCCCGACAACATGGTGGTGCCGGGCAGTCGCTC
CGTGACACCGAACTACGACGATGAGGGTGTCTATCAAGCGCACACGAATT
AAACTGCGATGTATGATCTAAGTGAGTCCCCAGATCCGAGTCAAAGTAAA
GCGATAGTAGCAGAAACCCATAACAAACCTAGATTTGAGACACTTTTATG
ATTCAGTAAGAACCGCCAACTAACAGCAGAAAATAAAGCAGCCCACCGAC
AAGAAGAGCCATGAAAAACTACAAAAATATGAAACACGATGCAGAATATC
TCGAACAGACGAAAATACGTGTGAAACGCCTGAACCAGCGTAAATAAAAA
GACAAATACGAAATATATAGCAGCAACCAACCAACAACAACATGCCACCA
CCCAAGAACAACAATCAAGCAGAAAGCCATCTATATGTGTGCGTGTTTCT
TTGTCCGACTCTTGATTTGATAATTACCAATTAACAAGCAAAACCCAGCA
AGAAAATCAAACCAAACCAACAACACCACCAGCAAACCAGAACAACAGCA
ACATGAGCAACCACGGCAACCAGAACAACAGATCTATGTCTATGTCCAAA
ACTCCCCCACCAACCGACCTCTGTACTCTGCTCCCCGACAACCAATCCAA
CCAACCAGCTGTGAACTAACACCGAAGAATGATGTGCGACATGAATTGGA
CGTCAGCGTCGCATGGGCCATCTGACCAGGAACTACACCGTTGGCGTCTG
GCAGTAGGATTCATCCGACTGGGACTTGGGAGTCTACACATTTTACACCG
AAAGAAATCAATAGCCTATCAATAGTGTTGTCACATGCTTGTTGTTGCTC
TCACGCAGAGAATTGTTTCATATTGTTTTGTTCAGTGTTTGTTGCGTTCT
TCAGATTGATGATTTCGGTTCGAGTTGTGTTTGTGTTTGGATCACCACCT
AAGCATAATCATTTGTTTGTTACGAGTTAGGCGAATGTTCATTGTCACAC
ACGCAGATCCAGGATTAACTTTCTATCTGGCAGCTCTAAGTAGTTATTTC
CTTAAGCAAATCTTCACATTTACGCTGCAGCTATACACACGTTTATTTTA
TTTTATTTTATTTACCTACCATTCTGTCCCTTGATTATTTGTAGCCCCTA
GACGGGGCGATATTTCACAATTTTTAGTTTTAGTCGTGTTTATATCCACA
CATGCACACATGATACAAACACATACACATAACATACATAATACTTACAC
ACTATATATATATGATACATATATAGCCATGGTCTCTGAAAACAATTTAC
TGCTATTGAATTATGAAATGCTTAAACATAAATTTAACTTATGGTTAAAC
ACACAAAACAAATGGAAAACATACAATTGTATAATGTAATGATATCTTAC
TTTATATGACATAATGCAATGCTTTTAAAATACAATTTTTAAAAATCATG
TAAAAACTTTAAAATTAAATAAAAAAAAAACTACAAAAAATAAGAAAAAA
AAAAAAAA

FI20012.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:52:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26400625..26401420 2396..3192 3905 99.6 Plus
chr3R 27901430 chr3R 26394524..26395036 597..1109 2505 99.2 Plus
chr3R 27901430 chr3R 26355602..26356013 32..443 2000 99 Plus
chr3R 27901430 chr3R 26399687..26400066 2016..2395 1855 99.2 Plus
chr3R 27901430 chr3R 26396734..26397020 1510..1796 1435 100 Plus
chr3R 27901430 chr3R 26395098..26395351 1108..1361 1240 99.2 Plus
chr3R 27901430 chr3R 26399113..26399333 1796..2015 1040 99.1 Plus
chr3R 27901430 chr3R 26394308..26394463 442..597 780 100 Plus
chr3R 27901430 chr3R 26395423..26395573 1359..1509 755 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 30578117..30578913 2396..3192 3970 99.9 Plus
3R 32079331 3R 30572023..30572535 597..1109 2565 100 Plus
3R 32079331 3R 30533096..30533507 32..443 2060 100 Plus
3R 32079331 3R 30577179..30577558 2016..2395 1900 100 Plus
3R 32079331 3R 30574241..30574527 1510..1796 1435 100 Plus
3R 32079331 3R 30572597..30572850 1108..1361 1270 100 Plus
3R 32079331 3R 30576598..30576818 1796..2015 1055 99.5 Plus
3R 32079331 3R 30571807..30571962 442..597 780 100 Plus
3R 32079331 3R 30572922..30573072 1359..1509 755 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:52:13 has no hits.

FI20012.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:53:01 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26355119..26355149 1..31 96 -> Plus
chr3R 26355602..26356013 32..443 99 -> Plus
chr3R 26394310..26394462 444..596 100 -> Plus
chr3R 26394524..26395036 597..1109 99 -> Plus
chr3R 26395100..26395351 1110..1361 99 -> Plus
chr3R 26395426..26395573 1362..1509 100 -> Plus
chr3R 26396734..26397019 1510..1795 100 -> Plus
chr3R 26399113..26399333 1796..2015 99 -> Plus
chr3R 26399687..26400066 2016..2395 99 -> Plus
chr3R 26400625..26401399 2396..3170 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-18 17:11:46 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RG 1..1581 222..1802 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:14:44 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RG 1..1581 222..1802 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:42:50 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RG 1..1581 222..1802 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 17:11:46 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RG 1..3171 1..3170 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:14:44 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RG 8..3178 1..3170 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:42:50 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
tmod-RG 8..3178 1..3170 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:53:01 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30571809..30571961 444..596 100 -> Plus
3R 30533096..30533507 32..443 100 -> Plus
3R 30532614..30532644 1..31 96 -> Plus
3R 30572023..30572535 597..1109 100 -> Plus
3R 30572599..30572850 1110..1361 100 -> Plus
3R 30572925..30573072 1362..1509 100 -> Plus
3R 30574241..30574526 1510..1795 100 -> Plus
3R 30576598..30576818 1796..2015 99 -> Plus
3R 30577179..30577558 2016..2395 100 -> Plus
3R 30578117..30578891 2396..3170 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:53:01 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30571809..30571961 444..596 100 -> Plus
3R 30533096..30533507 32..443 100 -> Plus
3R 30532614..30532644 1..31 96 -> Plus
3R 30572023..30572535 597..1109 100 -> Plus
3R 30572599..30572850 1110..1361 100 -> Plus
3R 30572925..30573072 1362..1509 100 -> Plus
3R 30574241..30574526 1510..1795 100 -> Plus
3R 30576598..30576818 1796..2015 99 -> Plus
3R 30577179..30577558 2016..2395 100 -> Plus
3R 30578117..30578891 2396..3170 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:53:01 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30571809..30571961 444..596 100 -> Plus
3R 30533096..30533507 32..443 100 -> Plus
3R 30532614..30532644 1..31 96 -> Plus
3R 30572023..30572535 597..1109 100 -> Plus
3R 30572599..30572850 1110..1361 100 -> Plus
3R 30572925..30573072 1362..1509 100 -> Plus
3R 30574241..30574526 1510..1795 100 -> Plus
3R 30576598..30576818 1796..2015 99 -> Plus
3R 30577179..30577558 2016..2395 100 -> Plus
3R 30578117..30578891 2396..3170 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:14:44 Download gff for FI20012.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26398647..26398794 1362..1509 100 -> Plus
arm_3R 26358336..26358366 1..31 96 -> Plus
arm_3R 26358818..26359229 32..443 100 -> Plus
arm_3R 26397531..26397683 444..596 100 -> Plus
arm_3R 26397745..26398257 597..1109 100 -> Plus
arm_3R 26398321..26398572 1110..1361 100 -> Plus
arm_3R 26399963..26400248 1510..1795 100 -> Plus
arm_3R 26402320..26402540 1796..2015 99 -> Plus
arm_3R 26402901..26403280 2016..2395 100 -> Plus
arm_3R 26403839..26404613 2396..3170 99   Plus

FI20012.hyp Sequence

Translation from 221 to 1801

> FI20012.hyp
MSDIEDVFGGSAEETKPEPDAQSKTSVVTEHTEEVIPGETEKMVTETIDE
DGDVVEETTEVTRKTVKRTMKITETSATTKTTTLTTPAKLYGKDLSEYDD
VDVESLLAQLSPEEITILAKEVDPDDNFLPPDQRNSYECTKEATGPLNRK
QLIEHINKQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAI
DMGEEYEHALNDATQEEIIDLAAILGFHSMMNQDQYHASLLNKGQPVGLG
WDGITKSTQQKLFPMDPPNNTDVEESIKRVKDDDSKLIDLNLNNIKNISD
EKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEKSKTLRVLNVE
TNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKN
SSLLRLGLHLEFNDARHRVAAHLQRNIDRIFRVQKLKPNLPKLILPGNME
IERDLVAYNRSATPSPSPSPQPPVDYEVEEDPDNMVIRGGGDAFDPDVDP
DNMVVPGSRSVTPNYDDEGVYQAHTN*

FI20012.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:55
Subject Length Description Subject Range Query Range Score Percent Strand
tmod-PG 526 CG1539-PG 1..526 1..526 2704 100 Plus
tmod-PN 567 CG1539-PN 1..525 1..525 2698 100 Plus
tmod-PM 449 CG1539-PM 1..436 1..436 2192 98.9 Plus
tmod-PI 439 CG1539-PI 1..435 1..436 2191 99.3 Plus
tmod-PL 439 CG1539-PL 1..435 1..436 2191 99.3 Plus

FI20012.pep Sequence

Translation from 221 to 1801

> FI20012.pep
MSDIEDVFGGSAEETKPEPDAQSKTSVVTEHTEEVIPGETEKMVTETIDE
DGDVVEETTEVTRKTVKRTMKITETSATTKTTTLTTPAKLYGKDLSEYDD
VDVESLLAQLSPEEITILAKEVDPDDNFLPPDQRNSYECTKEATGPLNRK
QLIEHINKQAIETPDQPEFEPFVQGKVRGKKWVPPPRDARDIEAEEQIAI
DMGEEYEHALNDATQEEIIDLAAILGFHSMMNQDQYHASLLNKGQPVGLG
WDGITKSTQQKLFPMDPPNNTDVEESIKRVKDDDSKLIDLNLNNIKNISD
EKLEQLFAALPQNEHLEVLSLTNVGLTDKTALLLAAAIEKSKTLRVLNVE
TNFISPPVIVKLVQALLKCHTIEEFRASNQRSAVLGNKIEMEITDLVEKN
SSLLRLGLHLEFNDARHRVAAHLQRNIDRIFRVQKLKPNLPKLILPGNME
IERDLVAYNRSATPSPSPSPQPPVDYEVEEDPDNMVIRGGGDAFDPDVDP
DNMVVPGSRSVTPNYDDEGVYQAHTN*

FI20012.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:43:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22912-PA 403 GF22912-PA 51..399 87..436 1779 96.6 Plus
Dana\GF22910-PA 80 GF22910-PA 1..78 1..75 321 88.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:43:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11761-PA 403 GG11761-PA 30..399 66..436 1886 97 Plus
Dere\GG11759-PA 144 GG11759-PA 1..74 1..74 356 97.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:43:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14162-PA 403 GH14162-PA 51..399 87..436 1737 94.3 Plus
Dgri\GH14143-PA 81 GH14143-PA 1..80 1..74 266 72.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:54
Subject Length Description Subject Range Query Range Score Percent Strand
tmod-PG 526 CG1539-PG 1..526 1..526 2704 100 Plus
tmod-PN 567 CG1539-PN 1..525 1..525 2698 100 Plus
tmod-PM 449 CG1539-PM 1..436 1..436 2192 98.9 Plus
tmod-PI 439 CG1539-PI 1..435 1..436 2191 99.3 Plus
tmod-PL 439 CG1539-PL 1..435 1..436 2191 99.3 Plus
tmod-PE 439 CG1539-PE 1..435 1..436 2191 99.3 Plus
tmod-PF 439 CG1539-PF 1..435 1..436 2191 99.3 Plus
tmod-PD 439 CG1539-PD 1..435 1..436 2191 99.3 Plus
tmod-PQ 454 CG1539-PQ 1..437 1..437 2188 98.6 Plus
tmod-PP 438 CG1539-PP 1..429 1..429 2183 100 Plus
tmod-PJ 409 CG1539-PJ 7..405 41..436 1848 92.5 Plus
tmod-PC 409 CG1539-PC 7..405 41..436 1848 92.5 Plus
tmod-PO 424 CG1539-PO 7..407 41..437 1845 91.8 Plus
tmod-PK 424 CG1539-PK 7..407 41..437 1845 91.8 Plus
tmod-PA 367 CG1539-PA 2..363 74..436 1825 99.2 Plus
tmod-PB 403 CG1539-PB 30..399 66..436 1824 97.3 Plus
tmod-PH 372 CG1539-PH 1..368 70..436 1822 98.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:43:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24865-PA 402 GI24865-PA 50..398 87..436 1771 95.7 Plus
Dmoj\GI24863-PA 83 GI24863-PA 1..83 1..76 262 73.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:43:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13473-PA 470 GL13473-PA 1..466 1..436 2046 87.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:43:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13696-PF 528 GA13696-PF 1..528 1..525 2423 93.2 Plus
Dpse\GA13696-PB 439 GA13696-PB 1..435 1..436 2095 94.7 Plus
Dpse\GA13696-PD 400 GA13696-PD 48..396 87..436 1771 95.7 Plus
Dpse\GA13696-PE 409 GA13696-PE 61..405 91..436 1753 95.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:43:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12892-PA 403 GM12892-PA 30..399 66..436 1890 97.3 Plus
Dsec\GM12889-PA 80 GM12889-PA 1..74 1..74 361 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:43:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21531-PA 403 GD21531-PA 64..399 100..436 1737 98.2 Plus
Dsim\GD21528-PA 80 GD21528-PA 1..74 1..74 360 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:43:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24508-PA 402 GJ24508-PA 35..398 72..436 1840 95.9 Plus
Dvir\GJ24506-PA 80 GJ24506-PA 1..78 1..74 269 74.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:43:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14144-PA 403 GK14144-PA 51..399 87..436 1782 96.3 Plus
Dwil\GK14142-PA 82 GK14142-PA 1..81 1..74 300 81.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:43:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10889-PA 403 GE10889-PA 30..399 66..436 1886 97 Plus
Dyak\GE10888-PA 76 GE10888-PA 1..74 1..74 351 98.6 Plus