BDGP Sequence Production Resources |
Search the DGRC for FI20014
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 200 |
Well: | 14 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Pino-RB |
Protein status: | FI20014.pep: gold |
Sequenced Size: | 1986 |
1986 bp assembled on 2012-04-18
GenBank Submission: BT133460.1
> FI20014.complete AGTTGCCAGCAATTTTGCAAGCAAAGTTTTGTTTTGCCTGAATTTTATCC AAATTTAACTTAAAATTCGGTTGCGTTGGCCTAAATTTGGATACTTAACT TCAAGCTGGTCGACTGAGCGTGCTGCTAGTATAAAGATGAAAACGGGCAG CAACAACAACCACATCTCCGCCAGCAGCAGCAGCAGCAACAACAACAACA ACAGCTCATTGGTGCAACAGCAGCAGCAACGCTCCACCACTTCCGTTTCC GTCTCCTCGTCTCACATTGTCACCGAGTGGGAGGATGGCATCATTTTCGA TGTGGACGATCCCGACTTTTGCAATCTGGCCACCGACAAGCTGAACTTCA TAGTGCCATCAGCAGCCAATATGTCGATCGCCAGTGTTCACGGTCCCCAA ATCGCCGACATCTGCAGTCCCCTGTCGCATCACAATCTCGGTCTGTCTGC CTCGCTGCCAGATCTGGTGGGCAGTCCCCTGGAGATCAGCATGGACAACG TGCTGACCATTGAGGAGCTGCGCCAGCACATGGGCTCCTGCTTCACCTGC GGCGTCTCCTGGACGGACGACCATGTGTCCCTCGACTGCAGCGAATGCGG TGGCTACAGCCTGGAGCGTCCCTGTCCCCTGTGCGACGGCCAGTGCGGTG TCCAATGGAAACGTGATTTCGCCATGTCCCATGCCTGCAGTCAAGCTCGC TGGGTGGGCGTGTGCATCAGCTACCCGGAAGTCGTGGCCGGAGTCCAGTT GCCCGTGGGAGCAGGCGCTGGAGCCGCCACCTCGTGTGCCGCTGCCGCTG CGAATCAACTGCGCCTGGCCCAGGAGCTGTGCTCCCGCCTGGAACAGCTG TCCACGTCGACGGCGAGCAAAAGCGGTCGCATCTAGAGCGCGGAATCCCC GCCCAGTTCCTTCGACAGCCAGACTGCAAACACGCCTCCACATCAGCCAC ACCCCCGCACACAGCCATTCATCCGGAAAGCAGAAGCTGAAGCAGAAGCA GAAAGCTGGAGCGGAATTAGCTCCACCTGCACACCCAAACACACAGTCTC TCACCCGTAATTTAGGGCCTAATTACTAAGCTTCTTAGCTGTTAGTTATT ATTGTTGTGCAGCGTTGAGTCTTTAGTTCTTTGTTTAGCACACACAATCT TTTGTTTTATGATTTCACCGGTATCGTTTTCGTTCCGATTCGTTGTGTGA CAGTGCAAATATTTAGCAACTAAGTTAGTTCCTTTGTTTACCTTCCAATG GCACCATTTGGTTTGCGCACATTACCTGTTCTATCCAGGAGAAGACTTCT TTCTGCCTAGACTTAAGCCGAGTTTAGGCAATGCAGTGATAACGGTGATA TTAGCCAGAAAGAATCGTGAGCAAATAGTGAATTTACATGATGTAGCAAA TGTCTAACGATAGCTATAGATCGACATGAGATGATCATTTTTGTATAACC CCACACGCACACACATCAAACAACCCGTGTAATCGTGTAGAGATTGTTGT TAACAATTAGTTAGTTGTTGCTTTCTGCCTTGTGTCAAAGCTTGTTCGAA GCGAGGAGCTCCGCGGGCACAGATCAAAGCTAGCTGCGATGGTGCCGGCG GAGGGTTCAGTGAGCGAAGAAAGAAGAATCTTCCAGATTGCCTAATGTGC ATAGTGCTCAACAAAGTAACTACAGGATTGAACAATTTCTCCAAGGGAAA AGTGAAAGCGCATAGAAATGAGCAATTAAGGATGTGAAAACACGCACAAG GAAACAATTGAAAAGCATTACTCAAAGTTGAAGATTTTCTGTGAAAATCC ATATGACATGTAGAAGTTTATACCTAATATATACACCTATATATTATATA CCACATAAATCTGCATACAATATACATAAATATATATATATTTTTAATGT AGAGATATGTTTTGTAAAAGACAAAGGCATATTTTTAAAATTAAATACCT AAACTATGCAAAAATCAAAACAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 1114504..1115798 | 1968..676 | 6305 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 1116293..1116542 | 676..427 | 1250 | 100 | Minus |
chr2L | 23010047 | chr2L | 1128001..1128219 | 353..135 | 1095 | 100 | Minus |
chr2L | 23010047 | chr2L | 1128672..1128811 | 140..1 | 625 | 96.4 | Minus |
chr2L | 23010047 | chr2L | 1117297..1117372 | 427..352 | 380 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1114652..1115944 | 1968..676 | 6465 | 100 | Minus |
2L | 23513712 | 2L | 1116441..1116690 | 676..427 | 1250 | 100 | Minus |
2L | 23513712 | 2L | 1128129..1128347 | 353..135 | 1095 | 100 | Minus |
2L | 23513712 | 2L | 1128800..1128939 | 140..1 | 685 | 99.3 | Minus |
2L | 23513712 | 2L | 1117443..1117518 | 427..352 | 380 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 833..1073 | 1737..1970 | 151 | 56.7 | Plus |
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 483..663 | 1732..1919 | 131 | 58.5 | Plus |
412 | 7567 | 412 412 7567bp | 1812..1869 | 1908..1847 | 119 | 72.6 | Minus |
TAHRE | 10463 | TAHRE OSV 10463bp | 9369..9424 | 1204..1147 | 114 | 69 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1114501..1114582 | 1890..1971 | 97 | == | Minus |
chr2L | 1114656..1115797 | 677..1818 | 99 | <- | Minus |
chr2L | 1116293..1116542 | 427..676 | 100 | <- | Minus |
chr2L | 1117298..1117370 | 354..426 | 100 | <- | Minus |
chr2L | 1128001..1128124 | 230..353 | 100 | == | Minus |
chr2L | 1128676..1128811 | 1..136 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pino-RB | 1..750 | 137..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pino-RB | 1..750 | 137..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pino-RB | 1..750 | 137..886 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pino-RB | 15..1982 | 1..1968 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pino-RB | 15..1980 | 1..1966 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pino-RB | 15..1980 | 1..1966 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1114649..1115943 | 677..1971 | 99 | <- | Minus |
2L | 1116441..1116690 | 427..676 | 100 | <- | Minus |
2L | 1117444..1117516 | 354..426 | 100 | <- | Minus |
2L | 1128129..1128345 | 137..353 | 100 | <- | Minus |
2L | 1128804..1128939 | 1..136 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1114649..1115943 | 677..1971 | 99 | <- | Minus |
2L | 1116441..1116690 | 427..676 | 100 | <- | Minus |
2L | 1117444..1117516 | 354..426 | 100 | <- | Minus |
2L | 1128129..1128345 | 137..353 | 100 | <- | Minus |
2L | 1128804..1128939 | 1..136 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1114649..1115943 | 677..1971 | 99 | <- | Minus |
2L | 1116441..1116690 | 427..676 | 100 | <- | Minus |
2L | 1117444..1117516 | 354..426 | 100 | <- | Minus |
2L | 1128129..1128345 | 137..353 | 100 | <- | Minus |
2L | 1128804..1128939 | 1..136 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1117444..1117516 | 354..426 | 100 | <- | Minus |
arm_2L | 1116441..1116690 | 427..676 | 100 | <- | Minus |
arm_2L | 1114649..1115943 | 677..1971 | 99 | <- | Minus |
arm_2L | 1128129..1128345 | 137..353 | 100 | <- | Minus |
arm_2L | 1128804..1128939 | 1..136 | 100 | Minus |
Translation from 136 to 885
> FI20014.pep MKTGSNNNHISASSSSSNNNNNSSLVQQQQQRSTTSVSVSSSHIVTEWED GIIFDVDDPDFCNLATDKLNFIVPSAANMSIASVHGPQIADICSPLSHHN LGLSASLPDLVGSPLEISMDNVLTIEELRQHMGSCFTCGVSWTDDHVSLD CSECGGYSLERPCPLCDGQCGVQWKRDFAMSHACSQARWVGVCISYPEVV AGVQLPVGAGAGAATSCAAAAANQLRLAQELCSRLEQLSTSTASKSGRI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14736-PA | 204 | GF14736-PA | 33..112 | 19..97 | 311 | 77.5 | Plus |
Dana\GF14736-PA | 204 | GF14736-PA | 135..204 | 180..249 | 267 | 92.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24613-PA | 249 | GG24613-PA | 1..249 | 1..249 | 1260 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10567-PA | 169 | GH10567-PA | 1..169 | 79..249 | 709 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pino-PB | 249 | CG4710-PB | 1..249 | 1..249 | 1309 | 100 | Plus |
Pino-PC | 171 | CG4710-PC | 1..171 | 79..249 | 911 | 100 | Plus |
Pino-PA | 171 | CG4710-PA | 1..171 | 79..249 | 911 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21963-PA | 261 | GI21963-PA | 8..258 | 3..249 | 843 | 69.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15076-PA | 256 | GL15076-PA | 1..255 | 1..248 | 973 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25452-PA | 169 | GA25452-PA | 1..168 | 79..248 | 846 | 94.1 | Plus |
Dpse\GA25446-PA | 108 | GA25446-PA | 41..107 | 22..96 | 154 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16627-PA | 246 | GM16627-PA | 1..246 | 1..249 | 1254 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22927-PA | 248 | GD22927-PA | 1..248 | 1..249 | 1259 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17830-PA | 269 | GJ17830-PA | 47..266 | 39..249 | 823 | 73.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24368-PA | 230 | GK24368-PA | 2..230 | 29..249 | 895 | 79.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15777-PA | 251 | GE15777-PA | 1..251 | 1..249 | 1272 | 97.6 | Plus |
Translation from 136 to 885
> FI20014.hyp MKTGSNNNHISASSSSSNNNNNSSLVQQQQQRSTTSVSVSSSHIVTEWED GIIFDVDDPDFCNLATDKLNFIVPSAANMSIASVHGPQIADICSPLSHHN LGLSASLPDLVGSPLEISMDNVLTIEELRQHMGSCFTCGVSWTDDHVSLD CSECGGYSLERPCPLCDGQCGVQWKRDFAMSHACSQARWVGVCISYPEVV AGVQLPVGAGAGAATSCAAAAANQLRLAQELCSRLEQLSTSTASKSGRI*