BDGP Sequence Production Resources |
Search the DGRC for FI20018
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 200 |
Well: | 18 |
Vector: | pFlc-1 |
Associated Gene/Transcript | CG13650-RB |
Protein status: | FI20018.pep: gold |
Sequenced Size: | 2711 |
2711 bp assembled on 2012-04-06
GenBank Submission: BT133362.1
> FI20018.complete GATATCCTTTTTCGGCAGAAAAGTGATTATATTGTTAAGTTAATTTAATC GGATAAAGATATATACACTTGATTTTTAAGCTGCATATGTAGGTGCGTCA ATTATTTGATCGAGTGTATAGCTCATAAGTCCTGTATATAGATCTCTGGA GGCAAATGTGCGTGCTTATCACAAGTCCCCGACCAACCGCAGTACAAATT TATGTAAATGCGTGAAAACTTATGCCCATCAACGGAATCAGCAGAACGTA ATAACATTTTCAGAGTCAAAACCAAACAATGACAGCTGATTCCAGTGCAC GTAATGTTTTTCGAAAGAACGGCGTTGCCGGCTTGGGCAACAACGGTCAT GGCCGGAATCTTATTACGACCGCCAATCCATCCGGAGGAAGTAGCGCCTC GCTGCTACAAAAGCAGTTGTCCTTCAAAACGCCCGTTGGCTCCAAGCAGA TGGGCAAATCCGATGAGATCGAAATGATCGACAGTGCTAACATCGAAAAC TTCAATACTCGATATAATAAGAACAGCATTATAGGATGGATATGCTGTGC CCCGTGCATTTGGCTGCGCACCTCGGCGGCAGTGCACAAAATGGCCATCA CATCAGCCACCCTGTTGGTGACCACATTGCTGGTAGCATCGCCCATATTA TTTTTGATAAGCACGGCACCCTCACCTCTGCCAAGAGATTGCTACATGGA CGGGGATCGGTGCTCGCCGGCCGTTTCAGCACCGCCGGAATGCTCGGATC CCATTTGCGAGGCGGTGGCCTCCAGCATCCAGGCCAGACTCAATTGGAAC AAGGATCCGTGCACGGAGTTCAAGAAGTTCAGCTGTTGGCGCAACACGCC CAATAAAAATATAACGAACCTCATTGAAATGGGAAACTCACAGAAAAGCG TCGATTCACAAATGCTGTATCTATTCCAGAACAAGATTATGAACGGCAGC TTTGGTATATTGCACAATTTGTTTGAAAGCTGCTTGCAGCAGACAACTAA CTCAACTGTCATGCACAGGATATTTGATTCCCTAGGCGGTTATCTGCCTG TTGGTTCGGTGGGACCATCGAGTATAGCACCCTTAATAGCCAAGATCTAT GATCTCGGCCCCAGTCCGTTGGTAGACCTATATCACGACCTTAGCTACGG AAGGCGACCGCACATTCTACTTATTATTAGTGGACCCAGCACTTCGTCAA CTATCCTCGAGCGAAAAATACGTTGGATGAGTCCAAAAGCCCCGCCTAGT CGTATTCGACAAGGGGTACCGAAGTTGTTAGCCGATTTAATCGAGAATTT CCTACCTTACTTCGTGTCATATGCTCAAAGAGTTTCCGAGAAGGATACTA TTTTTGAATTTATAAAGGACCTAAACAAGCTGCAAGTTGAACACTCTCGT CGAGGATTCTGGGACAGCACTGTTTTATATAATGTATCCAGTCTACAAGA CTTGTACCCAGTTTTAAATTGGACATTGCTTATACCGCAGAACTGGAGCG GACCCATCGTTGTTAGGAATAGTGATTATCTGAAAGCCTTAGAATACTTT CTCACCAAGTACCCAACTAGAGTTGCACACAATTCGCTATTATTGTTAAG TGCTTTACAAATATTGCCACGTGATTATCCGAGCCCCGAAGTTTGCACCC GATCCACCATGTGGGCATTGCCCGAATTATCATCTTCCCTATATATTGCT CAACATTCATCTGAAGACCTAAAGGACACCACAAAACGAGCTGAGATCAT ATTTAAGTCATTAAAAGCGCACTTGAAGAGAGCGCCGTCTTTAAAAGGAG CTGCCCTAGTGAAACTATCGGCTTTGAAGATCCAATCGCAGACCTGGGAG GGATTCTCAAACACAACGGACTTGTTGAAGAGTCTCCAACCTCTGAATAT TACGTCCGAATGCTGGTTTCAAAACATTTTGGAGATATACAAAAAGAACA AACTGGAGCCGAATGATATCAGTTTGAACGGCGGCTCCCATGATGCTTGG GCATATCCCATAGTGTCGACCATTTTTTATGATACGCTGAGCCATTCAAT CGTTGTCCCATTATCCGTCATACTCATACCATACTTTAATGCTGTATTGC CGCCATATCTGCACTATGCTTCTGTTGGTGTTTCCATTGCCAAAGAGATT TTGCGTTCCATCACAAAATCGTTCGACGAAAAGGCAATGCGTTGTGTGCC GCATTCTGTAAATATATTCTCGAACTACAGCCGCATGGATATACTGATTC ATTCGGGAGGAATGCAGATATCATACCACTCAATGCTTTCCCTAACCGGT CCCATCAAGGGAATGGCCAGACTACCTGGTCTGAATCTAACGCCGACGCA AATCTTCTTTTTAGTTTCCGCCCAGGAACTGTGTGCTGAATCGAACTACT TGGGCATCGATACAAACGCTCCCGAATTCGATAATATATTGGGTTGGCTC GTTGCCCAGGGCGGGAGTGCGACTGAAGTTTTCAAATGTCCATCGGGATC CATGATCAATGTACAGAAGACCTGCAATGTGCTTTAAATATTATTTCGAC GTCAACTTGGACTATCTACTTTGTCTACGATCCCAATTGAGTTTAAAATT AGTAGCTCTAGTGACTTACCTACTAGTATTGTTTTCTATTTTAAATGTAA AATGTATATTTTAAATAAATATACTGTTAATAAAAAAAAAAACAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 20934614..20935012 | 918..520 | 1980 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 20932678..20933063 | 2437..2052 | 1900 | 99.5 | Minus |
chr3R | 27901430 | chr3R | 20935078..20935437 | 521..162 | 1785 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 20934259..20934551 | 1211..919 | 1465 | 100 | Minus |
chr3R | 27901430 | chr3R | 20933559..20933835 | 1740..1464 | 1370 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 20933248..20933504 | 1996..1740 | 1270 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 20932373..20932619 | 2684..2438 | 1205 | 99.2 | Minus |
chr3R | 27901430 | chr3R | 20934040..20934209 | 1379..1210 | 835 | 99.4 | Minus |
chr3R | 27901430 | chr3R | 20935506..20935663 | 162..5 | 760 | 98.7 | Minus |
chr3R | 27901430 | chr3R | 20933889..20933978 | 1467..1378 | 420 | 97.8 | Minus |
chr3R | 27901430 | chr3R | 20933130..20933185 | 2052..1997 | 280 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 25111464..25111862 | 918..520 | 1995 | 100 | Minus |
3R | 32079331 | 3R | 25109528..25109913 | 2437..2052 | 1930 | 100 | Minus |
3R | 32079331 | 3R | 25111928..25112287 | 521..162 | 1800 | 100 | Minus |
3R | 32079331 | 3R | 25111109..25111401 | 1211..919 | 1465 | 100 | Minus |
3R | 32079331 | 3R | 25110409..25110685 | 1740..1464 | 1385 | 100 | Minus |
3R | 32079331 | 3R | 25110098..25110354 | 1996..1740 | 1285 | 100 | Minus |
3R | 32079331 | 3R | 25109223..25109469 | 2684..2438 | 1235 | 100 | Minus |
3R | 32079331 | 3R | 25110890..25111059 | 1379..1210 | 850 | 100 | Minus |
3R | 32079331 | 3R | 25112356..25112513 | 162..5 | 790 | 100 | Minus |
3R | 32079331 | 3R | 25110739..25110828 | 1467..1378 | 435 | 98.9 | Minus |
3R | 32079331 | 3R | 25109980..25110035 | 2052..1997 | 280 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6913..7022 | 2691..2585 | 156 | 63.1 | Minus |
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1287..1348 | 2684..2627 | 129 | 72.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 20932427..20932619 | 2438..2630 | 98 | <- | Minus |
chr3R | 20932678..20933062 | 2053..2437 | 99 | <- | Minus |
chr3R | 20933130..20933185 | 1997..2052 | 100 | <- | Minus |
chr3R | 20933248..20933504 | 1740..1996 | 99 | <- | Minus |
chr3R | 20933560..20933835 | 1464..1739 | 99 | <- | Minus |
chr3R | 20933893..20933976 | 1380..1463 | 98 | <- | Minus |
chr3R | 20934040..20934207 | 1212..1379 | 99 | <- | Minus |
chr3R | 20934259..20934551 | 919..1211 | 100 | <- | Minus |
chr3R | 20934614..20935010 | 522..918 | 99 | <- | Minus |
chr3R | 20935078..20935436 | 163..521 | 99 | <- | Minus |
chr3R | 20935506..20935666 | 1..162 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13650-RB | 1..2259 | 279..2537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13650-RB | 1..2259 | 279..2537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13650-RB | 1..2259 | 279..2537 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13650-RB | 1..2680 | 2..2681 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13650-RB | 1..2680 | 2..2681 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG13650-RB | 1..2680 | 2..2681 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25109226..25109469 | 2438..2681 | 100 | <- | Minus |
3R | 25109528..25109912 | 2053..2437 | 100 | <- | Minus |
3R | 25109980..25110035 | 1997..2052 | 100 | <- | Minus |
3R | 25110098..25110354 | 1740..1996 | 100 | <- | Minus |
3R | 25110410..25110685 | 1464..1739 | 100 | <- | Minus |
3R | 25110743..25110826 | 1380..1463 | 100 | <- | Minus |
3R | 25110890..25111057 | 1212..1379 | 100 | <- | Minus |
3R | 25111109..25111401 | 919..1211 | 100 | <- | Minus |
3R | 25111464..25111860 | 522..918 | 100 | <- | Minus |
3R | 25111928..25112286 | 163..521 | 100 | <- | Minus |
3R | 25112356..25112516 | 1..162 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25109226..25109469 | 2438..2681 | 100 | <- | Minus |
3R | 25109528..25109912 | 2053..2437 | 100 | <- | Minus |
3R | 25109980..25110035 | 1997..2052 | 100 | <- | Minus |
3R | 25110098..25110354 | 1740..1996 | 100 | <- | Minus |
3R | 25110410..25110685 | 1464..1739 | 100 | <- | Minus |
3R | 25110743..25110826 | 1380..1463 | 100 | <- | Minus |
3R | 25110890..25111057 | 1212..1379 | 100 | <- | Minus |
3R | 25111109..25111401 | 919..1211 | 100 | <- | Minus |
3R | 25111464..25111860 | 522..918 | 100 | <- | Minus |
3R | 25111928..25112286 | 163..521 | 100 | <- | Minus |
3R | 25112356..25112516 | 1..162 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25109226..25109469 | 2438..2681 | 100 | <- | Minus |
3R | 25109528..25109912 | 2053..2437 | 100 | <- | Minus |
3R | 25109980..25110035 | 1997..2052 | 100 | <- | Minus |
3R | 25110098..25110354 | 1740..1996 | 100 | <- | Minus |
3R | 25110410..25110685 | 1464..1739 | 100 | <- | Minus |
3R | 25110743..25110826 | 1380..1463 | 100 | <- | Minus |
3R | 25110890..25111057 | 1212..1379 | 100 | <- | Minus |
3R | 25111109..25111401 | 919..1211 | 100 | <- | Minus |
3R | 25111464..25111860 | 522..918 | 100 | <- | Minus |
3R | 25111928..25112286 | 163..521 | 100 | <- | Minus |
3R | 25112356..25112516 | 1..162 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 20936612..20936779 | 1212..1379 | 100 | <- | Minus |
arm_3R | 20934948..20935191 | 2438..2681 | 100 | <- | Minus |
arm_3R | 20935250..20935634 | 2053..2437 | 100 | <- | Minus |
arm_3R | 20935702..20935757 | 1997..2052 | 100 | <- | Minus |
arm_3R | 20935820..20936076 | 1740..1996 | 100 | <- | Minus |
arm_3R | 20936132..20936407 | 1464..1739 | 100 | <- | Minus |
arm_3R | 20936465..20936548 | 1380..1463 | 100 | <- | Minus |
arm_3R | 20936831..20937123 | 919..1211 | 100 | <- | Minus |
arm_3R | 20937186..20937582 | 522..918 | 100 | <- | Minus |
arm_3R | 20937650..20938008 | 163..521 | 100 | <- | Minus |
arm_3R | 20938078..20938238 | 1..162 | 98 | Minus |
Translation from 278 to 2536
> FI20018.hyp MTADSSARNVFRKNGVAGLGNNGHGRNLITTANPSGGSSASLLQKQLSFK TPVGSKQMGKSDEIEMIDSANIENFNTRYNKNSIIGWICCAPCIWLRTSA AVHKMAITSATLLVTTLLVASPILFLISTAPSPLPRDCYMDGDRCSPAVS APPECSDPICEAVASSIQARLNWNKDPCTEFKKFSCWRNTPNKNITNLIE MGNSQKSVDSQMLYLFQNKIMNGSFGILHNLFESCLQQTTNSTVMHRIFD SLGGYLPVGSVGPSSIAPLIAKIYDLGPSPLVDLYHDLSYGRRPHILLII SGPSTSSTILERKIRWMSPKAPPSRIRQGVPKLLADLIENFLPYFVSYAQ RVSEKDTIFEFIKDLNKLQVEHSRRGFWDSTVLYNVSSLQDLYPVLNWTL LIPQNWSGPIVVRNSDYLKALEYFLTKYPTRVAHNSLLLLSALQILPRDY PSPEVCTRSTMWALPELSSSLYIAQHSSEDLKDTTKRAEIIFKSLKAHLK RAPSLKGAALVKLSALKIQSQTWEGFSNTTDLLKSLQPLNITSECWFQNI LEIYKKNKLEPNDISLNGGSHDAWAYPIVSTIFYDTLSHSIVVPLSVILI PYFNAVLPPYLHYASVGVSIAKEILRSITKSFDEKAMRCVPHSVNIFSNY SRMDILIHSGGMQISYHSMLSLTGPIKGMARLPGLNLTPTQIFFLVSAQE LCAESNYLGIDTNAPEFDNILGWLVAQGGSATEVFKCPSGSMINVQKTCN VL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG13650-PB | 752 | CG13650-PB | 1..752 | 1..752 | 3919 | 100 | Plus |
Translation from 278 to 2536
> FI20018.pep MTADSSARNVFRKNGVAGLGNNGHGRNLITTANPSGGSSASLLQKQLSFK TPVGSKQMGKSDEIEMIDSANIENFNTRYNKNSIIGWICCAPCIWLRTSA AVHKMAITSATLLVTTLLVASPILFLISTAPSPLPRDCYMDGDRCSPAVS APPECSDPICEAVASSIQARLNWNKDPCTEFKKFSCWRNTPNKNITNLIE MGNSQKSVDSQMLYLFQNKIMNGSFGILHNLFESCLQQTTNSTVMHRIFD SLGGYLPVGSVGPSSIAPLIAKIYDLGPSPLVDLYHDLSYGRRPHILLII SGPSTSSTILERKIRWMSPKAPPSRIRQGVPKLLADLIENFLPYFVSYAQ RVSEKDTIFEFIKDLNKLQVEHSRRGFWDSTVLYNVSSLQDLYPVLNWTL LIPQNWSGPIVVRNSDYLKALEYFLTKYPTRVAHNSLLLLSALQILPRDY PSPEVCTRSTMWALPELSSSLYIAQHSSEDLKDTTKRAEIIFKSLKAHLK RAPSLKGAALVKLSALKIQSQTWEGFSNTTDLLKSLQPLNITSECWFQNI LEIYKKNKLEPNDISLNGGSHDAWAYPIVSTIFYDTLSHSIVVPLSVILI PYFNAVLPPYLHYASVGVSIAKEILRSITKSFDEKAMRCVPHSVNIFSNY SRMDILIHSGGMQISYHSMLSLTGPIKGMARLPGLNLTPTQIFFLVSAQE LCAESNYLGIDTNAPEFDNILGWLVAQGGSATEVFKCPSGSMINVQKTCN VL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17101-PA | 752 | GF17101-PA | 1..752 | 1..752 | 3807 | 95.6 | Plus |
Dana\GF16131-PA | 709 | GF16131-PA | 305..708 | 404..751 | 173 | 21.8 | Plus |
Dana\GF20227-PA | 794 | GF20227-PA | 538..793 | 531..751 | 170 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12288-PA | 660 | GG12288-PA | 1..660 | 1..752 | 3128 | 82.2 | Plus |
Dere\GG19262-PA | 790 | GG19262-PA | 534..789 | 531..751 | 164 | 25 | Plus |
Dere\GG15258-PA | 1038 | GG15258-PA | 716..1037 | 470..751 | 158 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18046-PA | 571 | GH18046-PA | 1..320 | 1..325 | 1280 | 73.8 | Plus |
Dgri\GH18046-PA | 571 | GH18046-PA | 306..571 | 487..752 | 1257 | 86.8 | Plus |
Dgri\GH24626-PA | 787 | GH24626-PA | 528..786 | 528..751 | 184 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Nepl16-PB | 752 | CG13650-PB | 1..752 | 1..752 | 3919 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23825-PA | 574 | GI23825-PA | 1..323 | 1..325 | 1257 | 72.3 | Plus |
Dmoj\GI23825-PA | 574 | GI23825-PA | 309..574 | 487..752 | 1245 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21940-PA | 575 | GL21940-PA | 1..324 | 1..325 | 1487 | 86.2 | Plus |
Dper\GL21940-PA | 575 | GL21940-PA | 307..575 | 484..752 | 1310 | 91.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12436-PA | 575 | GA12436-PA | 1..324 | 1..325 | 1484 | 85.8 | Plus |
Dpse\GA12436-PA | 575 | GA12436-PA | 307..575 | 484..752 | 1305 | 90.7 | Plus |
Dpse\GA21880-PA | 785 | GA21880-PA | 529..784 | 531..751 | 174 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17751-PA | 752 | GM17751-PA | 1..752 | 1..752 | 3993 | 99.3 | Plus |
Dsec\GM23001-PA | 759 | GM23001-PA | 503..758 | 531..751 | 158 | 24.6 | Plus |
Dsec\GM23172-PA | 1040 | GM23172-PA | 711..1039 | 463..751 | 156 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18235-PA | 576 | GD18235-PA | 1..321 | 1..321 | 1669 | 97.5 | Plus |
Dsim\GD18235-PA | 576 | GD18235-PA | 308..576 | 484..752 | 1397 | 98.1 | Plus |
Dsim\GD20045-PA | 1040 | GD20045-PA | 711..1039 | 463..751 | 155 | 23.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23597-PA | 630 | GJ23597-PA | 1..368 | 1..370 | 1520 | 74.1 | Plus |
Dvir\GJ23597-PA | 630 | GJ23597-PA | 340..630 | 467..752 | 1256 | 82.5 | Plus |
Dvir\GJ23291-PA | 797 | GJ23291-PA | 349..796 | 379..751 | 192 | 22.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13886-PA | 751 | GK13886-PA | 1..751 | 1..752 | 3546 | 86.3 | Plus |
Dwil\GK16267-PA | 785 | GK16267-PA | 526..784 | 528..751 | 188 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10740-PA | 576 | GE10740-PA | 1..325 | 1..325 | 1660 | 96 | Plus |
Dyak\GE10740-PA | 576 | GE10740-PA | 308..576 | 484..752 | 1392 | 98.1 | Plus |
Dyak\GE15881-PA | 786 | GE15881-PA | 530..785 | 531..751 | 163 | 25 | Plus |