Clone FI20037 Report

Search the DGRC for FI20037

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:200
Well:37
Vector:pFlc-1
Associated Gene/TranscriptCG4820-RB
Protein status:FI20037.pep: gold
Sequenced Size:1121

Clone Sequence Records

FI20037.complete Sequence

1121 bp assembled on 2012-03-22

GenBank Submission: BT133337.1

> FI20037.complete
GAAGTTATCAGTCGACATGAAGGAGTTCTGCCGCACCTGCGGCAAGACCG
TCGTGGCCGATGAATGCCTTCAGATCTTCACGCCTGCGGGCCGAAAGTTG
CTGCAGTGCGTCCGTTCCATCACAAATTGCTGGCTGCAGAATGTCCAGGA
TTTGCCCAATCACATATGTACGGACTGCCAGGTGCTGCTCAGCCAGGTGC
AAAAGTTCCGGCGGCGTTGTGCCAAGATCGAGAAGTACTTCGCCAGGCGG
CGGAGGAGAATGAATCTCGGCGAGGCTCCAGCGGCCATGGAGCAACTTCG
CGTCCAGCAGGCAGCTGCTCCGGATCCGCTGGGCATTGACGAGCTGATGT
CGGCCAGTGACATCAAAATAGAACCCATCCAGTTGCAAATGGAAGAGGAC
CCACAAGCGCCGTATCCCGAAAATCAGCTTGAACAAGCTCTTAGCTATGG
CAATGCACCGGGTGAGGACATCCTACCCCTTCCCGAGGACTATGGAGAGG
CACAGACTGAAGTGGCGACCACTACCAACGAGCCAGCACAGCGAAGAAGC
AAGAACACGGCCAAAATAAAGTCCAAGAAGCACACAATGCGCGTGGGCCG
AAAGCTGATCCATGTAAAAGTCATCGATGATAAGCAGCCAAAGCGTATTG
TGGACCGCAATGGACCCAGCGCCAAGCCCTGCATCTGCGAGCACTGCGGC
CGGCAATTCAAAGACACCAGCAATCTCCATGTCCATCTGCTGCGGCACAC
GGGCACCAAGCCGTTCGAGTGCGACCAGTGCCACCAGAAGTGCTACACGC
TCCACCTGCTGCGGCGCCACCAGCTGAAGCACACGGAGGGTCCCTACGCC
TGCACCTTCTGCGGCCTGGAGTACAGCACGAACAGCTCGCGCGTGAGACA
TGAAAGGGAGGCCTGCAAGAAGGGACGAGCGCCGCAATCCAAGTGGGAGA
TCATCAAGAAGGGCGAGCGCACTTTCCACTGCGAGGTGTGCGATCTCTGG
TTCCTGCGCGCCGGCAACTTTACTCAGCACATCAACTCTTCCAGTCACAT
CGAAAACGAACGAAGAAAGAAAAGAAAATCAAATCCAACCGCCATTAATT
CATAAAAGCTTTATCGACCAT

FI20037.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:08:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 7042375..7043149 133..907 3845 99.7 Plus
chr3R 27901430 chr3R 7043335..7043462 979..1106 640 100 Plus
chr3R 27901430 chr3R 7042196..7042312 17..133 585 100 Plus
chr3R 27901430 chr3R 7043205..7043278 905..978 370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 11216792..11217566 133..907 3875 100 Plus
3R 32079331 3R 11217752..11217879 979..1106 640 100 Plus
3R 32079331 3R 11216613..11216729 17..133 585 100 Plus
3R 32079331 3R 11217622..11217695 905..978 370 100 Plus
Blast to na_te.dros performed 2019-03-15 13:08:43
Subject Length Description Subject Range Query Range Score Percent Strand
frogger 2483 frogger FROGGER 2483bp 1205..1251 591..544 111 72.9 Minus

FI20037.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:09:34 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 7043207..7043278 907..978 100 -> Plus
chr3R 7043335..7043462 979..1106 100   Plus
chr3R 7042376..7043148 134..906 99 -> Plus
chr3R 7042190..7042312 9..133 96 -> Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-03-22 13:57:27 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
CG4820-RB 1..1089 17..1105 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:06 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
CG4820-RB 1..1089 17..1105 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:22:47 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
CG4820-RB 1..1089 17..1105 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-03-22 13:57:27 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
CG4820-RB 1..1092 15..1106 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:06 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
CG4820-RB 73..1168 9..1106 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:22:47 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
CG4820-RB 73..1168 9..1106 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:34 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11217752..11217879 979..1106 100   Plus
3R 11216607..11216729 9..133 96 -> Plus
3R 11216793..11217565 134..906 100 -> Plus
3R 11217624..11217695 907..978 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:34 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11217752..11217879 979..1106 100   Plus
3R 11216607..11216729 9..133 96 -> Plus
3R 11216793..11217565 134..906 100 -> Plus
3R 11217624..11217695 907..978 100 -> Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:09:34 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
3R 11217752..11217879 979..1106 100   Plus
3R 11216607..11216729 9..133 96 -> Plus
3R 11216793..11217565 134..906 100 -> Plus
3R 11217624..11217695 907..978 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:06 Download gff for FI20037.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 7042329..7042451 9..133 96 -> Plus
arm_3R 7042515..7043287 134..906 100 -> Plus
arm_3R 7043346..7043417 907..978 100 -> Plus
arm_3R 7043474..7043601 979..1106 100   Plus

FI20037.pep Sequence

Translation from 1 to 1104

> FI20037.pep
KLSVDMKEFCRTCGKTVVADECLQIFTPAGRKLLQCVRSITNCWLQNVQD
LPNHICTDCQVLLSQVQKFRRRCAKIEKYFARRRRRMNLGEAPAAMEQLR
VQQAAAPDPLGIDELMSASDIKIEPIQLQMEEDPQAPYPENQLEQALSYG
NAPGEDILPLPEDYGEAQTEVATTTNEPAQRRSKNTAKIKSKKHTMRVGR
KLIHVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHT
GTKPFECDQCHQKCYTLHLLRRHQLKHTEGPYACTFCGLEYSTNSSRVRH
EREACKKGRAPQSKWEIIKKGERTFHCEVCDLWFLRAGNFTQHINSSSHI
ENERRKKRKSNPTAINS*

FI20037.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16739-PA 343 GF16739-PA 1..333 6..360 1244 67.9 Plus
Dana\GF22975-PA 367 GF22975-PA 1..352 6..366 349 28.4 Plus
Dana\GF17452-PA 372 GF17452-PA 5..352 10..357 283 28.4 Plus
Dana\GF18383-PA 412 GF18383-PA 221..398 179..350 263 34.2 Plus
Dana\GF18168-PA 364 GF18168-PA 1..359 6..366 259 24.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:05:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17967-PA 368 GG17967-PA 1..368 6..367 1797 90.8 Plus
Dere\GG18034-PA 334 GG18034-PA 3..330 5..358 348 29.5 Plus
Dere\GG11820-PA 361 GG11820-PA 5..356 9..366 333 28.3 Plus
Dere\GG18288-PA 425 GG18288-PA 5..416 10..354 333 26 Plus
Dere\GG16750-PA 430 GG16750-PA 1..409 6..349 272 24.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:05:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18113-PA 380 GH18113-PA 1..354 6..354 1013 55.2 Plus
Dgri\GH18643-PA 383 GH18643-PA 1..377 6..366 372 29.2 Plus
Dgri\GH22313-PA 345 GH22313-PA 1..289 6..307 278 29.5 Plus
Dgri\GH18112-PA 426 GH18112-PA 5..421 10..353 267 23.3 Plus
Dgri\GH19016-PA 442 GH19016-PA 9..408 6..349 262 26.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG4820-PB 362 CG4820-PB 1..362 6..367 1957 100 Plus
CG31441-PA 341 CG31441-PA 3..331 5..349 387 27.1 Plus
CG18764-PA 409 CG18764-PA 5..395 10..349 380 28.1 Plus
ranshi-PA 346 CG9793-PA 6..338 10..355 330 28.1 Plus
CG1792-PA 372 CG1792-PA 6..350 10..366 330 28.4 Plus
CG17802-PA 439 CG17802-PA 5..421 10..349 330 25.4 Plus
CG17806-PA 421 CG17806-PA 1..400 6..349 309 23.9 Plus
CG17803-PB 587 CG17803-PB 86..444 10..345 293 24.5 Plus
CG17803-PA 587 CG17803-PA 86..444 10..345 293 24.5 Plus
M1BP-PA 418 CG9797-PA 9..397 6..359 276 24.3 Plus
CG8159-PB 399 CG8159-PB 2..331 6..352 267 24.3 Plus
Odj-PA 430 CG7357-PA 1..284 6..303 262 28.8 Plus
CG17801-PB 381 CG17801-PB 29..368 32..349 247 24 Plus
CG14711-PA 377 CG14711-PA 32..362 31..349 244 24.4 Plus
CG6689-PA 613 CG6689-PA 167..463 10..303 242 23.1 Plus
CG4424-PA 345 CG4424-PA 2..328 1..354 234 23.3 Plus
ouib-PA 312 CG11762-PA 6..311 10..357 232 22.7 Plus
CG4854-PA 319 CG4854-PA 4..316 3..357 212 24.5 Plus
CG31388-PA 446 CG31388-PA 279..438 222..364 209 33.1 Plus
CG9215-PA 560 CG9215-PA 41..440 33..354 205 24.4 Plus
dwg-PA 592 CG2711-PA 241..496 99..348 198 26.1 Plus
CG6813-PC 294 CG6813-PC 136..292 221..365 192 31.7 Plus
CG17359-PA 339 CG17359-PA 1..327 4..355 190 22.3 Plus
CG6808-PB 375 CG6808-PB 10..363 10..349 188 23 Plus
CG6808-PA 375 CG6808-PA 10..363 10..349 188 23 Plus
Meics-PB 571 CG8474-PB 62..426 50..351 185 21.7 Plus
Meics-PA 583 CG8474-PA 62..438 50..351 185 22.4 Plus
gl-PA 604 CG7672-PA 430..581 220..352 185 30.3 Plus
gl-PC 679 CG7672-PC 430..581 220..352 185 30.3 Plus
CG18262-PA 469 CG18262-PA 304..410 226..346 182 29.5 Plus
CG2712-PA 501 CG2712-PA 335..483 218..357 179 29 Plus
erm-PB 603 CG31670-PB 263..448 161..355 179 26.3 Plus
erm-PA 611 CG31670-PA 271..456 161..355 179 26.3 Plus
erm-PC 654 CG31670-PC 271..456 161..355 179 26.3 Plus
erm-PD 698 CG31670-PD 271..456 161..355 179 26.3 Plus
rgr-PA 856 CG8643-PA 682..789 225..346 176 33.3 Plus
rgr-PC 889 CG8643-PC 715..822 225..346 176 33.3 Plus
CG11902-PB 1426 CG11902-PB 1255..1372 211..344 176 31.1 Plus
su(Hw)-PC 941 CG8573-PC 414..520 228..350 174 32.3 Plus
su(Hw)-PB 941 CG8573-PB 414..520 228..350 174 32.3 Plus
su(Hw)-PA 941 CG8573-PA 414..520 228..350 174 32.3 Plus
CG3281-PA 538 CG3281-PA 283..430 209..350 172 29.5 Plus
CG14667-PB 337 CG14667-PB 1..319 4..349 171 22 Plus
Zif-PC 388 CG10267-PC 49..325 45..343 171 23.2 Plus
Zif-PB 388 CG10267-PB 49..325 45..343 171 23.2 Plus
Zif-PA 388 CG10267-PA 49..325 45..343 171 23.2 Plus
sens-2-PB 746 CG31632-PB 566..678 229..350 171 29.7 Plus
sens-2-PA 746 CG31632-PA 566..678 229..350 171 29.7 Plus
CG6654-PA 639 CG6654-PA 438..570 225..343 170 30.1 Plus
CG6813-PD 256 CG6813-PD 136..246 221..343 167 31 Plus
CG6813-PB 256 CG6813-PB 136..246 221..343 167 31 Plus
CG6654-PA 639 CG6654-PA 494..608 225..355 167 28.8 Plus
CG6689-PA 613 CG6689-PA 455..603 199..355 165 26.2 Plus
Meics-PB 571 CG8474-PB 420..539 219..346 163 32.6 Plus
Meics-PA 583 CG8474-PA 432..551 219..346 163 32.6 Plus
CG31388-PA 446 CG31388-PA 1..330 6..343 158 22.3 Plus
Meics-PB 571 CG8474-PB 402..491 229..330 154 33 Plus
Meics-PA 583 CG8474-PA 414..503 229..330 154 33 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:05:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23401-PA 372 GI23401-PA 1..366 6..366 363 30.2 Plus
Dmoj\GI24615-PA 305 GI24615-PA 3..298 5..349 320 29 Plus
Dmoj\GI22393-PA 359 GI22393-PA 4..344 8..352 291 27.5 Plus
Dmoj\GI22983-PA 389 GI22983-PA 209..361 212..349 264 40.3 Plus
Dmoj\GI24613-PA 425 GI24613-PA 260..412 216..353 250 35.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12565-PA 375 GL12565-PA 1..364 6..360 1257 67 Plus
Dper\GL23638-PA 343 GL23638-PA 1..323 33..352 320 28 Plus
Dper\GL12614-PA 349 GL12614-PA 5..331 10..349 305 26.8 Plus
Dper\GL22114-PA 400 GL22114-PA 5..398 10..357 293 25.1 Plus
Dper\GL20513-PA 349 GL20513-PA 5..332 10..350 261 27.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18456-PA 375 GA18456-PA 1..364 6..360 1256 67 Plus
Dpse\GA14725-PA 375 GA14725-PA 10..355 10..352 329 26.5 Plus
Dpse\GA27381-PB 385 GA27381-PB 1..362 6..351 324 27.3 Plus
Dpse\GA27571-PA 349 GA27571-PA 5..331 10..349 305 26.8 Plus
Dpse\GA15068-PA 400 GA15068-PA 5..398 10..357 300 25.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:05:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23924-PA 362 GM23924-PA 1..362 6..367 1900 96.7 Plus
Dsec\GM23931-PA 335 GM23931-PA 3..328 5..349 372 28.5 Plus
Dsec\GM23960-PA 412 GM23960-PA 5..403 10..354 346 27 Plus
Dsec\GM16437-PA 377 GM16437-PA 6..355 10..366 292 28.3 Plus
Dsec\GM26322-PA 346 GM26322-PA 1..330 9..352 291 26.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18738-PA 360 GD18738-PA 1..360 6..367 1876 96.4 Plus
Dsim\GD20673-PA 394 GD20673-PA 3..329 5..349 357 27.9 Plus
Dsim\GD18769-PA 413 GD18769-PA 5..404 10..354 347 27.7 Plus
Dsim\GD20209-PA 426 GD20209-PA 5..408 10..349 316 25.8 Plus
Dsim\GD20849-PA 397 GD20849-PA 53..381 10..352 291 25.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:05:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22565-PA 333 GJ22565-PA 1..332 6..325 912 54.1 Plus
Dvir\GJ23093-PA 378 GJ23093-PA 1..372 6..366 349 28.2 Plus
Dvir\GJ24681-PA 402 GJ24681-PA 6..368 9..349 328 28.4 Plus
Dvir\GJ22564-PA 424 GJ22564-PA 5..410 10..349 283 25.1 Plus
Dvir\GJ22678-PA 361 GJ22678-PA 2..346 6..352 266 25.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:05:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14007-PA 225 GK14007-PA 19..219 161..360 852 78.6 Plus
Dwil\GK11090-PA 394 GK11090-PA 1..386 6..360 361 28.4 Plus
Dwil\GK12137-PA 319 GK12137-PA 1..300 6..351 327 27.1 Plus
Dwil\GK13294-PA 325 GK13294-PA 1..286 6..367 312 27.1 Plus
Dwil\GK13271-PA 363 GK13271-PA 1..363 6..360 282 26.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26078-PA 370 GE26078-PA 1..370 6..367 1794 90.3 Plus
Dyak\GE26084-PA 342 GE26084-PA 4..328 6..349 341 30.3 Plus
Dyak\GE24186-PA 431 GE24186-PA 5..422 10..354 328 26.7 Plus
Dyak\GE10953-PA 362 GE10953-PA 3..357 7..366 320 28.5 Plus
Dyak\GE24832-PA 344 GE24832-PA 6..334 10..352 275 26.2 Plus

FI20037.hyp Sequence

Translation from 9 to 1104

> FI20037.hyp
HKMKEFCRTCGKTVVADECLQIFTPAGRKLLQCVRSITNCWLQNVQDLPN
HICTDCQVLLSQVQKFRRRCAKIEKYFARRRRRMNLGEAPAAMEQLRVQQ
AAAPDPLGIDELMSASDIKIEPIQLQMEEDPQAPYPENQLEQALSYGNAP
GEDILPLPEDYGEAQTEVATTTNEPAQRRSKNTAKIKSKKHTMRVGRKLI
HVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHTGTK
PFECDQCHQKCYTLHLLRRHQLKHTEGPYACTFCGLEYSTNSSRVRHERE
ACKKGRAPQSKWEIIKKGERTFHCEVCDLWFLRAGNFTQHINSSSHIENE
RRKKRKSNPTAINS*

FI20037.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG4820-PB 362 CG4820-PB 1..362 3..364 1957 100 Plus
CG31441-PA 341 CG31441-PA 3..331 2..346 386 27.1 Plus
CG18764-PA 409 CG18764-PA 5..395 7..346 380 28.1 Plus
ranshi-PA 346 CG9793-PA 6..338 7..352 330 28.1 Plus
CG1792-PA 372 CG1792-PA 6..350 7..363 330 28.4 Plus