Clone FI20063 Report

Search the DGRC for FI20063

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:200
Well:63
Vector:pFlc-1
Associated Gene/TranscriptImp-RJ
Protein status:FI20063.pep: gold
Sequenced Size:3955

Clone Sequence Records

FI20063.complete Sequence

3955 bp assembled on 2012-04-10

GenBank Submission: BT133404.1

> FI20063.complete
GGGAAATTGGGATCCGTATATCCGGCAGGCAGGCAGTTCACTCGTCGCCG
TTGCGTCAGTTCGTTCGACTCTCGACTCTCAGCTCACAGTTCGCAGTTAA
ATAGTTAATAGTCAATAGCTCACGCCGAACAGCTATCGAGATATTAGTGT
TTTGGATTCAGATTCAGATTCAGATTCAGATACGGATACGGATTCAAACG
GCGCCGCCATTTGTGATTTTTGTTGTTTTTTCTTGTATGAGCAAAAAGTG
ACAAAGCACAAAAAAAAAGAAAAAAAAAGATAAAAACCAGTGAAAAGCCA
AAGGAAAAGCGCAAAGAAAAGTGAAAAATCATCATAAAATAACAAACAAA
AATTCGACGAGAATTCTTGAGGTTTACCAAATACACCAAAGTATAACTCT
TTTTTTTGGCCCAATTGACACCAAAAACAAACAAAAACCACATACCACTA
ATGTAACAATTTTTTTGAAGCCCACAAAAAGGACGAGTAAAGCAAAAAAA
AATTAAATCGCAACGCACAACCAAGTTTTCGAAAAAAAAAAAAACAAAAA
GTTTAAATTCAAATCGTAAAAGACAGTTGCGAAGACCCGTGAAAAAATTT
AAAATAAGAAATGCAAACGCGACTTTAAACCCAAAACCACTGACAAACGC
TTCTTTCACACCGGTTCAGCAAAGGTCAGCGAAAGTTTCGACTCGGCAAT
AATAAACGAAAATTACCAAAAAATATTGAAAAGATACAGAAAAACCTAAT
TACAAATCGTAAAATCCGTCAAGGATATGAGTAAATCAAGTAATTGAGCG
CGCTAAATTTAAAAAGTTATCATTCCACACGTAACATCCGAAACGATCAA
GAGTTAAAGGCAGGAGTTAAACGAAGACAAGCTTAAAAATACAAAAATAT
TGAGATATTTCAAAAGCTCCGATTCGCCGCGACCCAATCAAATTCTAAAG
TGTTTGACCAGCGATTTTTGCACAACTTCGGTTTCAGTCAGGCATACAGG
GATATATATATATCTAAAGTGCATATATATCCGATCGATCGACTCACCAA
CGTCTAAGGTAAACCTACAAGAAACAACACACGCACACCAAAAAACCGAA
AAGCAAAAAAAAGAGCTACTGAAAATGGCATCCGAACTGGATCAATTCGC
CGACCTGGAACTCTCAAAGGAGGATCGTGAACAGATCTTCGATCCGCCAC
TGGATCGACAGCAGTTGGAAGGTGCTGGCACCTCAAGAGCTGCTGTTGGT
CTGAACGGTGTCGAGTTCGAGGGCAGCAAGCTGCATGCCGAGCAGCTGGA
CAAGAACCAGCGGCGTAGCCAGCGTAACCAGCGCAATCCGTATCCGGGTA
TGCCCGGTCCCGGACGCCAGGCGGACTTTCCGCTGCGCATTCTTGTGCAG
AGCGAAATGGTGGGCGCCATCATTGGTCGACAGGGCAGCACCATCAGGAC
GATCACACAACAGAGCCGTGCTCGCGTCGACGTCCATCGTAAGGAGAATG
TTGGATCGCTGGAGAAATCGATTACGATCTATGGCAATCCGGAGAACTGC
ACCAACGCCTGTAAGCGCATCCTGGAAGTTATGCAGCAGGAGGCCATCTC
TACGAATAAGGGTGAACTCTCCCCGGAATGCAGTGAAATTTGCCTCAAAA
TACTCGCCCACAACAATTTGATTGGACGAATCATTGGCAAGTCGGGCAAT
ACCATTAAACGGATCATGCAGGACACCGATACGAAGATCACTGTCAGCTC
TATCAACGACATCAACAGCTTCAATTTGGAGCGAATCATTACGGTCAAGG
GATTAATTGAGAACATGTCGCGTGCTGAGAACCAAATTAGCACCAAGCTG
CGCCAGAGCTACGAGAACGATCTGCAGGCGATGGCGCCGCAGAGCCTCAT
GTTCCCCGGTCTCCATCCGATGGCAATGATGTCGACACCGGGCAACGGCA
TGGTCTTCAATACGAGCATGCCGTTCCCCTCGTGTCAAAGCTTTGCCATG
TCCAAGACTCCGGCTAGTGTGGTGCCACCGGTCTTCCCCAATGACCTACA
GGAAACCACCTATCTCTACATACCCAACAACGCTGTCGGCGCCATTATCG
GCACCAGGGGCTCGCATATCCGAAGCATAATGCGCTTCTCGAACGCATCC
CTTAAAATAGCCCCCCTCGACGCCGACAAGCCGCTGGACCAACAAACGGA
GCGCAAGGTGACGATTGTTGGCACACCGGAGGGTCAGTGGAAGGCGCAGT
ACATGATCTTCGAGAAGATGCGCGAAGAAGGCTTCATGTGTGGCACGGAC
GATGTGCGCCTCACGGTTGAGTTGCTTGTGGCCAGCTCTCAGGTGGGCCG
TATCATTGGCAAGGGTGGCCAAAATGTGCGAGAATTGCAGCGCGTGACGG
GCAGTGTGATCAAATTGCCCGAACATGCCCTTGCACCGCCATCCGGTGGA
GATGAAGAGACACCAGTGCACATCATCGGACTATTCTACAGTGTACAGTC
TGCCCAGCGACGCATCCGAGCCATGATGCTTTCGACAAATCCGCCGCCAA
TAACCAAAAAACAGAAAGCTGCCAAAGAACAATTGCAACAACAGCAACAG
AGCCTAGCCGGAGCCGCGTCCAGCGGTTCCCAGCAGCAACAGCCACAGTC
GCCATCTCAACAACAGGCACTGCCGCCGCAATTGCATCATCAGCCTGTGT
CGTCGGCGTCGTCATCGTCGACGCCGCCTGCACACCATCAGCAGCAGGCG
TCGACGGCAGCGACCTCACACCAGCTGCAGCAGCAGCAGCCATCGCCGCC
GCCACCTGGCAATGCAACTGCGGCCGCAGCTCAGCAGCAGCAGCAGCTGG
CGAGCTCACAACAGTAAGGAGGAATCACCGTTAAAGGAGAGCCGGCGCCG
CAGCAGCAGCAGCAGAAGCAGCAAAAGCAGCAGCAGCAGCAACATCAGCA
GCAGCAGCAGCAGCAGCAGCGAAAGCGCCAAAAATAGCCAAGGCAGGGTT
TTCTACTGTTGATACTACCTCCACAGCACACCCATAAGATTCAATACCCC
AAGACCCAAAAGCACCCACCACAATTTACAACCCTATATAACTACAAGCT
AACCGTAGGCGCCACCTTTGTGCTGGCACAGGCGACGGCAAAAGTAAGCA
AGCAACCTGGAGCAGTAACATAAGCAAAATTTTACGCATATAGAACTGTA
GGGGAACCACCACATCAAAAAGTGAGCTGCGTGAAGAGCTCTACTAGTTC
ATAGCAGTGTATTTCGACTTTAACAAGATCAACATAAAACAGCAGTCACA
CAGCAAGAATAACAATAACATAACATTCTTCATTTGCATACTAAGAAATA
AAGAGAAAAAGTTAATAGAAAGCAGCGCGCTATCGTTCATAGAAACCACT
AAAAACAAAACCCCGCCCAAAAATCGAAACTTTGCGTTGTTGTTCTGCTA
GTTGTAAACTTTTGCGTCAGCTGAGAATTCGGTACCGCCTAAACTGTTGT
GAACGTTTTCAAGGCAGTAGGAGTAAAACCTTAAATATTCATAATTTGTA
CAAGTAAACCATATATTCAACAACAACAACACAAAGAGTCAAAGTAACTA
AAGAGAAAACCCCTTAAACTAACACTAAATTTGATTGCAAAAAGGGGAAA
TAATGGATAATGAAGGAAAGTTTAGTAGTGTATGCGTTATATTTTTTTTA
AATATATTTAACTATAAAACGTTTATTTTTAATTATTTTTTTTAACAAAG
ATTTAGTAAGCTTACATTTAAGTGGAATGAATAGAAGAGAAGTGAGCAAA
GCGTAAGAGAATGAGATTGAGAATCAATTTAAAACAAAAAAAAAATAAGT
AGGGACAACCATTTCGTTGATCCCAAAACTACCGAGAATTACACAAGAAG
AAAAAGTACACAAGCGAAAATAAGAATCAAGAAATATCCAAAAAAAAAAA
AAAAA

FI20063.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:35:11
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 10687330..10688773 3937..2494 7205 99.9 Minus
chrX 22417052 chrX 10704575..10705418 1237..393 4175 99.9 Minus
chrX 22417052 chrX 10689167..10689899 2344..1612 3650 99.9 Minus
chrX 22417052 chrX 10713713..10714107 396..2 1960 99.7 Minus
chrX 22417052 chrX 10689952..10690328 1612..1236 1885 100 Minus
chrX 22417052 chrX 10688839..10688997 2498..2340 780 99.4 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10795982..10797442 3954..2494 7275 99.9 Minus
X 23542271 X 10813249..10814093 1237..393 4225 100 Minus
X 23542271 X 10797834..10798566 2344..1612 3665 100 Minus
X 23542271 X 10822388..10822782 396..2 1960 99.7 Minus
X 23542271 X 10798619..10798995 1612..1236 1885 100 Minus
X 23542271 X 10797508..10797666 2498..2340 795 100 Minus
Blast to na_te.dros performed 2019-03-15 13:35:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2264..2782 2585..3076 351 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2533 2750..2980 293 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2403..2944 2533..3073 286 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..7056 2628..2971 247 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6737..7090 2631..2972 227 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2392..2846 2560..2996 223 55.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..7151 2575..2981 221 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2785..3021 2632..2872 169 58.2 Plus
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 716..893 423..602 148 57.6 Plus
HeT-A 6083 HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). 960..1004 3889..3933 126 75.6 Plus
Juan 4236 Juan JUAN 4236bp 3612..3716 3506..3602 120 62.3 Plus

FI20063.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:36:25 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 10713717..10713756 353..392 100 == Minus
chrX 10687375..10687521 3746..3892 100 == Minus
chrX 10687581..10688296 2971..3686 99 == Minus
chrX 10688368..10688419 2848..2899 100 == Minus
chrX 10688535..10688768 2499..2732 100 <- Minus
chrX 10688839..10688994 2343..2498 99 <- Minus
chrX 10689169..10689898 1613..2342 99 <- Minus
chrX 10689952..10690326 1238..1612 100 <- Minus
chrX 10704575..10705418 393..1237 99 <- Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-10 14:38:17 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
Imp-RJ 1..1743 1125..2867 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:05:20 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
Imp-RJ 1..1743 1125..2867 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:34:10 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
Imp-RJ 1..1743 1125..2867 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-10 14:38:16 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
Imp-RJ 1..3938 2..3939 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:05:20 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
Imp-RJ 1..3938 2..3939 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:34:10 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
Imp-RJ 4..3942 1..3939 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:25 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
X 10797508..10797663 2343..2498 100 <- Minus
X 10795997..10797437 2499..3939 99 <- Minus
X 10797836..10798565 1613..2342 100 <- Minus
X 10798619..10798993 1238..1612 100 <- Minus
X 10813249..10814093 393..1237 100 <- Minus
X 10822392..10822782 1..392 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:25 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
X 10797508..10797663 2343..2498 100 <- Minus
X 10795997..10797437 2499..3939 99 <- Minus
X 10797836..10798565 1613..2342 100 <- Minus
X 10798619..10798993 1238..1612 100 <- Minus
X 10813249..10814093 393..1237 100 <- Minus
X 10822392..10822782 1..392 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:36:25 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
X 10797508..10797663 2343..2498 100 <- Minus
X 10795997..10797437 2499..3939 99 <- Minus
X 10797836..10798565 1613..2342 100 <- Minus
X 10798619..10798993 1238..1612 100 <- Minus
X 10813249..10814093 393..1237 100 <- Minus
X 10822392..10822782 1..392 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:05:20 Download gff for FI20063.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 10690030..10691470 2499..3939 99 <- Minus
arm_X 10691541..10691696 2343..2498 100 <- Minus
arm_X 10691869..10692598 1613..2342 100 <- Minus
arm_X 10692652..10693026 1238..1612 100 <- Minus
arm_X 10707282..10708126 393..1237 100 <- Minus
arm_X 10716425..10716815 1..392 99   Minus

FI20063.pep Sequence

Translation from 1124 to 2866

> FI20063.pep
MASELDQFADLELSKEDREQIFDPPLDRQQLEGAGTSRAAVGLNGVEFEG
SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAII
GRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRIL
EVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQD
TDTKITVSSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL
QAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVV
PPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDA
DKPLDQQTERKVTIVGTPEGQWKAQYMIFEKMREEGFMCGTDDVRLTVEL
LVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHI
IGLFYSVQSAQRRIRAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAASS
GSQQQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQQQASTAATSHQ
LQQQQPSPPPPGNATAAAAQQQQQLASSQQ*

FI20063.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:27:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20264-PA 590 GF20264-PA 1..544 1..538 2596 93.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:27:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18899-PA 568 GG18899-PA 32..568 38..580 2771 97.2 Plus
Dere\GG18898-PA 110 GG18898-PA 1..37 1..37 193 100 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12054-PA 611 GH12054-PA 1..564 1..546 2526 88.3 Plus
Dgri\GH14429-PA 362 GH14429-PA 24..339 85..385 153 23.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Imp-PJ 580 CG1691-PJ 1..580 1..580 2955 100 Plus
Imp-PF 573 CG1691-PF 1..573 1..580 2899 98.8 Plus
Imp-PD 573 CG1691-PD 1..573 1..580 2899 98.8 Plus
Imp-PH 573 CG1691-PH 1..573 1..580 2899 98.8 Plus
Imp-PE 573 CG1691-PE 1..573 1..580 2899 98.8 Plus
Imp-PG 573 CG1691-PG 1..573 1..580 2899 98.8 Plus
Imp-PM 638 CG1691-PM 1..638 1..580 2777 88.4 Plus
Imp-PL 638 CG1691-PL 1..638 1..580 2777 88.4 Plus
Imp-PK 631 CG1691-PK 89..631 38..580 2769 100 Plus
Imp-PB 566 CG1691-PB 31..566 38..580 2713 98.7 Plus
Imp-PA 566 CG1691-PA 31..566 38..580 2713 98.7 Plus
Imp-PC 566 CG1691-PC 31..566 38..580 2713 98.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15803-PA 596 GI15803-PA 1..596 1..580 2161 78.2 Plus
Dmoj\GI13561-PA 362 GI13561-PA 24..339 85..385 151 24.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:28:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12935-PA 163 GL12935-PA 1..163 1..163 845 96.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:28:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14212-PA 521 GA14212-PA 1..451 1..458 2376 96.7 Plus
Dpse\GA20351-PA 330 GA20351-PA 24..307 85..385 158 25 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:28:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11285-PA 566 GM11285-PA 31..566 38..580 2790 98.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:28:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Imp-PA 204 GD16012-PA 1..204 377..580 1005 99 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18657-PA 650 GJ18657-PA 1..563 1..502 2339 81.8 Plus
Dvir\GJ11921-PA 589 GJ11921-PA 24..332 85..378 154 24.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16164-PA 587 GK16164-PA 1..571 1..567 2542 90.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:28:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15370-PA 566 GE15370-PA 32..566 38..580 2783 97.6 Plus

FI20063.hyp Sequence

Translation from 1124 to 2866

> FI20063.hyp
MASELDQFADLELSKEDREQIFDPPLDRQQLEGAGTSRAAVGLNGVEFEG
SKLHAEQLDKNQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAII
GRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYGNPENCTNACKRIL
EVMQQEAISTNKGELSPECSEICLKILAHNNLIGRIIGKSGNTIKRIMQD
TDTKITVSSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDL
QAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVV
PPVFPNDLQETTYLYIPNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDA
DKPLDQQTERKVTIVGTPEGQWKAQYMIFEKMREEGFMCGTDDVRLTVEL
LVASSQVGRIIGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHI
IGLFYSVQSAQRRIRAMMLSTNPPPITKKQKAAKEQLQQQQQSLAGAASS
GSQQQQPQSPSQQQALPPQLHHQPVSSASSSSTPPAHHQQQASTAATSHQ
LQQQQPSPPPPGNATAAAAQQQQQLASSQQ*

FI20063.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
Imp-PJ 580 CG1691-PJ 1..580 1..580 2955 100 Plus
Imp-PF 573 CG1691-PF 1..573 1..580 2899 98.8 Plus
Imp-PD 573 CG1691-PD 1..573 1..580 2899 98.8 Plus
Imp-PH 573 CG1691-PH 1..573 1..580 2899 98.8 Plus
Imp-PE 573 CG1691-PE 1..573 1..580 2899 98.8 Plus