Clone FI20107 Report

Search the DGRC for FI20107

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:7
Vector:pFlc-1
Associated Gene/TranscriptCG3760-RA
Protein status:FI20107.pep: gold
Sequenced Size:1070

Clone Sequence Records

FI20107.complete Sequence

1070 bp assembled on 2012-04-04

GenBank Submission: BT133354.1

> FI20107.complete
ATACATCTGGCACAAAAGGCGTGCAGAGTTGTTCTCCAAATTTCCTGTCG
CGAATTTTATTCATTTATAATTAATTACAAGCCATGGCCGAACTGGACGA
TTTCTTCGCGAAAAAGGACAAGAAGAAGTCCAAGAACAAGACTAAGTTCG
TGACCGCCGACGAGATGGTGAAGAACCTGGAGGACGGCACCAAGCGCGAG
GTGGTCAAGCCCAAAAAACCTGAGGTAGCCGCTGGCGGCGTGGCAGTAGT
AGGCGAAAACGAGAATAGCGGCACCAAGGTGCCAGAGTCCGCCCCGCCCG
TCGAGGAGGAATGGAAGGAGTTCGAGGAGGAGCAGCGCAAGGACTACAGT
GGCTTAAAGATCGGCCAGCTGAGCACCATCTCTTCGGCCCGTTCCAGAAC
TGCCCAGGAAAGTTCCGAGTCGCAAGCTGCTCGAGTGCCCTCTGCCCCGG
ACGGCGGCAACTACAATGAGGACGATGAGGACAGCAATGGGTATGACAAC
GCGGACGTAAACAAGGAGCGCGTCGGCCACGGACCCTGGAAGAAAGTTGT
CCCAGCCGAGGAGGTAATGCAGATTCCGGTGCCCGTGGAGGTGGAAAAGC
ACTCGTCCAAGACCTACGTTTCACCCGCGCTACGATACAGCCAGCAGGCC
GGAAGTGGACTGGGAGGCGGCCCTACTGGGGGGGCATTGCGTCCACGACG
CGCCGCCCCCGACATCACCAATACCGAGTTTTTCCCAACCTTAAGTGCGG
CGCGTCCGGAGGAACAGCGCAAGAAGAAAAACGAACCCGCCTTCGAAGAA
GTCCGTCACGGAAGCCGTTTCCAGCGTGTTCAGGAGTCCACGGCTGCCCC
GGTGGCGGCCTCCAACCGATTCCAGTCGCTTGACGACGAAGCAAGCTAGG
TCAGCCCACGCCAACGGTGCTGTTGCTGGCCACTTGAACCGCTATCTACC
ACAGTGTCCGCTGCCGAGCTCAAGCCATCCAAAGGTTCTATGCCAGCACA
TGCAGATTTCTAGGCTTTTTGATTCATATAAACCACCACTGCTACTCTTA
CCCCAAAAAAAAAAAAAAAA

FI20107.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 20825225..20825637 642..1053 1970 99 Plus
chr2R 21145070 chr2R 20824332..20824627 1..296 1465 99.7 Plus
chr2R 21145070 chr2R 20824910..20825171 380..641 1280 99.2 Plus
chr2R 21145070 chr2R 20824713..20824796 296..379 420 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:14:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24939271..24939687 642..1057 2020 99.5 Plus
2R 25286936 2R 24938378..24938673 1..296 1480 100 Plus
2R 25286936 2R 24938956..24939217 380..641 1310 100 Plus
2R 25286936 2R 24938759..24938842 296..379 420 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:14:25 has no hits.

FI20107.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:15:08 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 20824332..20824627 1..296 99 -> Plus
chr2R 20824714..20824796 297..379 100 -> Plus
chr2R 20824910..20825171 380..641 99 -> Plus
chr2R 20825225..20825637 642..1054 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-04 13:43:31 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
CG3760-RA 1..816 84..899 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:59:40 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
CG3760-RA 1..816 84..899 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:25:44 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
CG3760-RA 1..816 84..899 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-04 13:43:31 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
CG3760-RA 40..1093 1..1053 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:59:40 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
CG3760-RA 7..1060 1..1053 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:25:44 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
CG3760-RA 7..1060 1..1053 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:15:08 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24938956..24939217 380..641 100 -> Plus
2R 24938378..24938673 1..296 100 -> Plus
2R 24938760..24938842 297..379 100 -> Plus
2R 24939271..24939683 642..1054 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:15:08 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24938956..24939217 380..641 100 -> Plus
2R 24938378..24938673 1..296 100 -> Plus
2R 24938760..24938842 297..379 100 -> Plus
2R 24939271..24939683 642..1054 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:15:08 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24938956..24939217 380..641 100 -> Plus
2R 24938378..24938673 1..296 100 -> Plus
2R 24938760..24938842 297..379 100 -> Plus
2R 24939271..24939683 642..1054 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:59:40 Download gff for FI20107.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20825901..20826196 1..296 100 -> Plus
arm_2R 20826283..20826365 297..379 100 -> Plus
arm_2R 20826479..20826740 380..641 100 -> Plus
arm_2R 20826794..20827206 642..1054 99   Plus

FI20107.pep Sequence

Translation from 83 to 898

> FI20107.pep
MAELDDFFAKKDKKKSKNKTKFVTADEMVKNLEDGTKREVVKPKKPEVAA
GGVAVVGENENSGTKVPESAPPVEEEWKEFEEEQRKDYSGLKIGQLSTIS
SARSRTAQESSESQAARVPSAPDGGNYNEDDEDSNGYDNADVNKERVGHG
PWKKVVPAEEVMQIPVPVEVEKHSSKTYVSPALRYSQQAGSGLGGGPTGG
ALRPRRAAPDITNTEFFPTLSAARPEEQRKKKNEPAFEEVRHGSRFQRVQ
ESTAAPVAASNRFQSLDDEAS*

FI20107.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13352-PA 264 GF13352-PA 1..264 1..271 815 76.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23019-PA 271 GG23019-PA 1..271 1..271 1102 95.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:09:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19835-PA 281 GH19835-PA 1..279 1..270 631 66.8 Plus
Dgri\GH10398-PA 217 GH10398-PA 1..211 1..224 196 33.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG3760-PA 271 CG3760-PA 1..271 1..271 1393 100 Plus
CG3760-PC 265 CG3760-PC 1..265 1..271 1350 97.8 Plus
CG3760-PB 265 CG3760-PB 1..265 1..271 1350 97.8 Plus
CG3760-PD 264 CG3760-PD 1..264 1..271 1333 97.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:09:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20423-PA 268 GI20423-PA 1..266 1..270 637 67.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11200-PA 272 GL11200-PA 1..270 1..270 731 74.3 Plus
Dper\GL21043-PA 232 GL21043-PA 1..226 1..224 147 29.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17668-PA 272 GA17668-PA 1..270 1..270 731 74.3 Plus
Dpse\GA18506-PA 232 GA18506-PA 1..226 1..224 154 30 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:09:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11915-PA 271 GM11915-PA 1..271 1..271 1387 98.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:09:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20097-PA 275 GJ20097-PA 1..273 1..270 529 65.5 Plus
Dvir\GJ18054-PA 238 GJ18054-PA 1..232 1..224 186 30.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:09:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20912-PA 271 GK20912-PA 24..269 23..270 646 66.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:09:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14456-PA 271 GE14456-PA 1..271 1..271 1064 95.9 Plus

FI20107.hyp Sequence

Translation from 83 to 898

> FI20107.hyp
MAELDDFFAKKDKKKSKNKTKFVTADEMVKNLEDGTKREVVKPKKPEVAA
GGVAVVGENENSGTKVPESAPPVEEEWKEFEEEQRKDYSGLKIGQLSTIS
SARSRTAQESSESQAARVPSAPDGGNYNEDDEDSNGYDNADVNKERVGHG
PWKKVVPAEEVMQIPVPVEVEKHSSKTYVSPALRYSQQAGSGLGGGPTGG
ALRPRRAAPDITNTEFFPTLSAARPEEQRKKKNEPAFEEVRHGSRFQRVQ
ESTAAPVAASNRFQSLDDEAS*

FI20107.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:25:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG3760-PA 271 CG3760-PA 1..271 1..271 1393 100 Plus
CG3760-PC 265 CG3760-PC 1..265 1..271 1350 97.8 Plus
CG3760-PB 265 CG3760-PB 1..265 1..271 1350 97.8 Plus
CG3760-PD 264 CG3760-PD 1..264 1..271 1333 97.4 Plus