Clone FI20110 Report

Search the DGRC for FI20110

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:10
Vector:pFlc-1
Associated Gene/TranscriptCG9253-RA
Protein status:FI20110.pep: gold
Sequenced Size:1681

Clone Sequence Records

FI20110.complete Sequence

1681 bp assembled on 2012-04-17

GenBank Submission: BT133459.1

> FI20110.complete
GTATTTTATTTCGACCACGTGCTGCTATTGGTAATGTCCGTACCGTGAAA
TTTTTCTGAAACTCATGTAACAAAATGTCGGAAACTTCAGAGGACGAACA
GACGCAGCTACAAACGAGTGACGAAGAGGAGGATCTAGGTAGCGAGGAGG
AGCAGGAAGATGAAGATAACAATCATAAGGAAGGGGACAGCGAGGCGGCA
CTAAGTGGTGAAGATGATAAAGGCTCCGAGGACGACGCAGCCGAGGAACA
GAAGCTAACCTGGAAAGATCTCGGTCTCAATGAGGCTTTGTGTCAAGCAT
GTGACGAATTGAAGTGGAAGGCGCCTTCGAAGATCCAACGTGAGGCCATT
CCGGTCGCCTTACAGGGCAAGGATGTAATTGGCCTAGCGGAGACCGGTTC
CGGCAAGACGGGCGCCTTCGCTCTGCCAATTTTACACGCCCTTCTCGAGA
ATCCGCAGCGGTATTTTGCCCTCGTGCTAACCCCCACGAGGGAACTGGCA
TTTCAAATTGGCGAGCAGTTTGAAGCCCTTGGTAGCGGGATTGGCATAAA
GTGTTGCGTGGTAGTCGGCGGCATGGACATGGTAGCCCAGGGTCTTCAAC
TGGCCAAGAAGCCGCATATTATAATTGCCACACCGGGTCGCTTGGTTGAT
CATCTAGAAAACATGAAAGGTTTTAACCTTAAGGCTATTAAATACTTGGT
CATGGACGAGGCGGATCGCATTCTTAACATGGATTTTGAGGTGGAGCTGG
ACAAGATTCTGAAGGTATTGCCGCGTGAACGACGAACCTTTCTGTTCAGT
GCGACCATGACCAAGAAAGTAAAGAAACTGCAGCGTGCCTCCCTTAAGGA
TCCCGTAAAGGTAGAGGTGTCTAACAAGTATCAGACGGTTGAGCAGCTGC
AGCAATCATATTTGTTTATCCCTGTCAAATACAAGGATGTGTATTTGGTT
CATATCCTTAATGAGCTGGCAGGCAACAGTTTCATGATATTTTGCAGCAC
CTGCAACAACACGGTTAAGACAGCGTTAATGCTTCGTGCGTTGGGATTGG
CTGCTATTCCGCTGCACGGTCAAATGTCGCAAAACAAGCGACTAGCTGCT
TTAAACAAATTCAAGGCCAAAAACCGGTCAATACTCATTTCGACGGACGT
GGCGTCCCGCGGCTTGGACATTCCTCATGTGGATGTCGTCGTTAATTTCG
ACATACCAACGCACAGCAAAGACTACATTCACCGCGTGGGAAGAACAGCA
AGAGCAGGTCGCTCCGGCAAAGCCATAACCCTCGTGAGCCAGTACGACAT
TGAGTTGTATCAGCGCATCGAACATCTACTGGGGAAGCAACTGACACTGT
ATAAGTGCGAGGAGGATGAGGTGATGGCCCTTCAAGAACGAGTAGCCGAA
GCACAGCGCACTGCAAAACTGGAGCTGAAGGATCTGGAAGATACAAGGGG
TGGTCACAAGAGGGGCGGGGACACCCACGATGATTCGGAGAACTTCACGG
GCGCACGCAAACGCATGAAACCGATGGGCGGCACTGGCGGTGGTGGAAGA
AAGAGCTTTGGCAAAAAGAATTGGAGCAAGGGCAAGCAGAAGAGATAGGT
CAGATCAGTCTCGATTTTTATTAGTGCTACTCTAAGAATAATGTAATAAA
AGTTTTAAATAGAAAGCAAAAAAAAAAAAAA

FI20110.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:44:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 21142515..21143650 531..1666 5665 99.9 Plus
chr2L 23010047 chr2L 21141739..21142008 4..273 1350 100 Plus
chr2L 23010047 chr2L 21142068..21142328 273..533 1290 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21144011..21145146 531..1666 5680 100 Plus
2L 23513712 2L 21143235..21143504 4..273 1350 100 Plus
2L 23513712 2L 21143564..21143824 273..533 1305 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:44:45 has no hits.

FI20110.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:45:37 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 21141736..21142007 1..272 99 -> Plus
chr2L 21142068..21142326 273..531 99 -> Plus
chr2L 21142516..21143650 532..1667 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-17 17:25:33 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
CG9253-RA 1..1524 75..1598 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:11:38 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
CG9253-RA 1..1524 75..1598 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:40:17 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
CG9253-RA 1..1524 75..1598 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-17 17:25:32 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
CG9253-RA 6..1671 1..1667 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:11:38 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
CG9253-RA 4..1669 1..1666 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:40:17 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
CG9253-RA 4..1669 1..1666 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:37 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21143232..21143503 1..272 99 -> Plus
2L 21143564..21143822 273..531 100 -> Plus
2L 21144012..21145146 532..1667 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:37 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21143232..21143503 1..272 99 -> Plus
2L 21143564..21143822 273..531 100 -> Plus
2L 21144012..21145146 532..1667 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:37 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21143232..21143503 1..272 99 -> Plus
2L 21143564..21143822 273..531 100 -> Plus
2L 21144012..21145146 532..1667 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:11:38 Download gff for FI20110.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21143232..21143503 1..272 99 -> Plus
arm_2L 21143564..21143822 273..531 100 -> Plus
arm_2L 21144012..21145146 532..1667 99   Plus

FI20110.hyp Sequence

Translation from 74 to 1597

> FI20110.hyp
MSETSEDEQTQLQTSDEEEDLGSEEEQEDEDNNHKEGDSEAALSGEDDKG
SEDDAAEEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKD
VIGLAETGSGKTGAFALPILHALLENPQRYFALVLTPTRELAFQIGEQFE
ALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGF
NLKAIKYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVK
KLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAG
NSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKN
RSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKA
ITLVSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLE
LKDLEDTRGGHKRGGDTHDDSENFTGARKRMKPMGGTGGGGRKSFGKKNW
SKGKQKR*

FI20110.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG9253-PA 507 CG9253-PA 1..507 1..507 2596 100 Plus
Dbp45A-PA 521 CG12759-PA 12..417 66..463 719 40.9 Plus
Rs1-PB 782 CG2173-PB 99..518 6..415 665 36.7 Plus
Rs1-PA 782 CG2173-PA 99..518 6..415 665 36.7 Plus
CG10333-PA 822 CG10333-PA 337..778 6..412 594 33.4 Plus

FI20110.pep Sequence

Translation from 74 to 1597

> FI20110.pep
MSETSEDEQTQLQTSDEEEDLGSEEEQEDEDNNHKEGDSEAALSGEDDKG
SEDDAAEEQKLTWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKD
VIGLAETGSGKTGAFALPILHALLENPQRYFALVLTPTRELAFQIGEQFE
ALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGF
NLKAIKYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVK
KLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAG
NSFMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKN
RSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKA
ITLVSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLE
LKDLEDTRGGHKRGGDTHDDSENFTGARKRMKPMGGTGGGGRKSFGKKNW
SKGKQKR*

FI20110.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14739-PA 525 GF14739-PA 1..525 1..507 2212 85.2 Plus
Dana\GF12227-PA 522 GF12227-PA 9..417 63..463 754 40.6 Plus
Dana\GF13667-PA 782 GF13667-PA 147..518 53..415 668 40.5 Plus
Dana\GF15062-PA 819 GF15062-PA 392..775 62..412 632 36.4 Plus
Dana\GF23818-PA 795 GF23818-PA 270..621 66..411 609 37.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21281-PA 524 GG21281-PA 1..524 1..507 2328 92.4 Plus
Dere\GG23409-PA 526 GG23409-PA 12..417 66..463 745 40.6 Plus
Dere\GG23340-PA 782 GG23340-PA 152..518 56..415 670 40.5 Plus
Dere\GG21122-PA 816 GG21122-PA 389..772 62..412 631 36.4 Plus
Dere\GG13958-PA 786 GG13958-PA 272..623 66..411 604 37.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:34:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13670-PA 518 GH13670-PA 1..517 1..506 2238 84.3 Plus
Dgri\GH21617-PA 524 GH21617-PA 12..417 66..463 751 41.6 Plus
Dgri\GH21077-PA 790 GH21077-PA 148..519 53..415 663 39.9 Plus
Dgri\GH11216-PA 864 GH11216-PA 437..820 62..412 624 36.4 Plus
Dgri\GH23229-PA 649 GH23229-PA 293..645 62..408 581 36.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:10:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG9253-PA 507 CG9253-PA 1..507 1..507 2596 100 Plus
Dbp45A-PA 521 CG12759-PA 12..417 66..463 719 40.9 Plus
Rs1-PB 782 CG2173-PB 99..518 6..415 665 36.7 Plus
Rs1-PA 782 CG2173-PA 99..518 6..415 665 36.7 Plus
CG10333-PA 822 CG10333-PA 337..778 6..412 594 33.4 Plus
CG6418-PB 791 CG6418-PB 275..690 67..496 577 35.1 Plus
pit-PC 680 CG6375-PC 86..665 8..507 576 29.4 Plus
pit-PA 680 CG6375-PA 86..665 8..507 576 29.4 Plus
pit-PB 680 CG6375-PB 86..665 8..507 576 29.4 Plus
CG6227-PA 1224 CG6227-PA 511..931 62..482 560 33.3 Plus
me31B-PB 428 CG4916-PB 5..387 39..423 553 33 Plus
me31B-PA 459 CG4916-PA 36..418 39..423 553 33 Plus
CG9143-PA 813 CG9143-PA 177..718 14..469 540 28.3 Plus
CG32344-PA 827 CG32344-PA 3..389 25..408 537 34.5 Plus
CG5800-PA 826 CG5800-PA 36..444 23..410 532 33.7 Plus
CG10077-PD 818 CG10077-PD 180..574 84..491 525 32.9 Plus
CG10077-PA 818 CG10077-PA 180..574 84..491 525 32.9 Plus
CG7483-PA 399 CG7483-PA 9..388 46..423 524 31.8 Plus
eIF4A-PF 403 CG9075-PF 2..385 30..416 520 31.2 Plus
eIF4A-PE 403 CG9075-PE 2..385 30..416 520 31.2 Plus
eIF4A-PD 403 CG9075-PD 2..385 30..416 520 31.2 Plus
eIF4A-PB 403 CG9075-PB 2..385 30..416 520 31.2 Plus
eIF4A-PC 403 CG9075-PC 2..385 30..416 520 31.2 Plus
eIF4A-PA 403 CG9075-PA 2..385 30..416 520 31.2 Plus
mahe-PC 945 CG10777-PC 260..670 84..489 517 32.3 Plus
mahe-PB 945 CG10777-PB 260..670 84..489 517 32.3 Plus
Rm62-PH 575 CG10279-PH 157..551 81..503 512 32.9 Plus
Rm62-PD 575 CG10279-PD 157..551 81..503 512 32.9 Plus
Rm62-PI 578 CG10279-PI 160..554 81..503 512 32.9 Plus
Rm62-PF 578 CG10279-PF 160..554 81..503 512 32.9 Plus
Rm62-PE 578 CG10279-PE 160..554 81..503 512 32.9 Plus
Rm62-PB 578 CG10279-PB 160..554 81..503 512 32.9 Plus
Rm62-PC 578 CG10279-PC 160..554 81..503 512 32.9 Plus
abs-PA 619 CG14637-PA 198..553 82..422 512 34.4 Plus
Rm62-PA 719 CG10279-PA 301..695 81..503 512 32.9 Plus
bel-PA 798 CG9748-PA 296..732 62..492 508 30.5 Plus
bel-PB 801 CG9748-PB 296..732 62..492 508 30.5 Plus
Hel25E-PB 424 CG7269-PB 3..389 38..405 504 32.5 Plus
Hel25E-PA 424 CG7269-PA 3..389 38..405 504 32.5 Plus
Hel25E-PC 424 CG7269-PC 3..389 38..405 504 32.5 Plus
CG9630-PA 613 CG9630-PA 14..371 68..404 492 37.8 Plus
vas-PC 661 CG46283-PC 252..589 68..400 481 33.8 Plus
vas-PB 661 CG46283-PB 252..589 68..400 481 33.8 Plus
vas-PA 661 CG46283-PA 252..589 68..400 481 33.8 Plus
CG7878-PA 703 CG7878-PA 300..698 78..495 469 33.4 Plus
CG8611-PC 828 CG8611-PC 344..815 77..453 451 28.8 Plus
CG8611-PA 974 CG8611-PA 343..814 77..453 451 28.8 Plus
CG8611-PB 975 CG8611-PB 344..815 77..453 451 28.8 Plus
Hlc-PB 560 CG1666-PB 6..439 58..447 442 29.4 Plus
Hlc-PA 560 CG1666-PA 6..439 58..447 442 29.4 Plus
Dbp73D-PA 687 CG9680-PA 48..563 3..415 429 27.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:34:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21075-PA 515 GI21075-PA 1..514 1..506 2178 83.8 Plus
Dmoj\GI20069-PA 521 GI20069-PA 12..417 66..463 743 41.1 Plus
Dmoj\GI18677-PA 787 GI18677-PA 147..518 53..415 662 40.2 Plus
Dmoj\GI14145-PA 837 GI14145-PA 410..793 62..412 630 36.4 Plus
Dmoj\GI12051-PA 797 GI12051-PA 280..631 66..411 593 36.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:34:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25891-PA 518 GL25891-PA 1..518 1..507 2269 86.8 Plus
Dper\GL17616-PA 527 GL17616-PA 9..417 63..463 759 40.8 Plus
Dper\GL11206-PA 785 GL11206-PA 147..518 53..415 646 40.5 Plus
Dper\GL19380-PA 437 GL19380-PA 10..393 62..412 616 36.4 Plus
Dper\GL21821-PA 812 GL21821-PA 280..631 66..411 610 38 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:34:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21647-PA 518 GA21647-PA 1..518 1..507 2269 86.8 Plus
Dpse\GA11795-PA 527 GA11795-PA 9..417 63..463 759 40.8 Plus
Dpse\GA15282-PA 785 GA15282-PA 147..518 53..415 647 40.5 Plus
Dpse\GA10248-PA 828 GA10248-PA 401..784 62..412 628 36.4 Plus
Dpse\GA19578-PA 812 GA19578-PA 280..631 66..411 609 38 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:34:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23393-PA 519 GM23393-PA 1..519 1..507 2455 93.1 Plus
Dsec\GM21090-PA 522 GM21090-PA 12..417 66..463 750 41.2 Plus
Dsec\GM21012-PA 782 GM21012-PA 152..518 56..415 672 40.5 Plus
Dsec\GM17282-PA 822 GM17282-PA 395..778 62..412 630 36.4 Plus
Dsec\GM24798-PA 786 GM24798-PA 271..622 66..411 598 36.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:34:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24302-PA 519 GD24302-PA 1..519 1..507 2455 93.3 Plus
Dsim\GD10627-PA 527 GD10627-PA 12..417 66..463 739 40.4 Plus
Dsim\GD10546-PA 782 GD10546-PA 152..518 56..415 672 40.5 Plus
Dsim\GD24145-PA 641 GD24145-PA 214..597 62..412 628 36.4 Plus
Dsim\GD17585-PA 786 GD17585-PA 271..622 66..411 599 36.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16136-PA 523 GJ16136-PA 1..522 1..506 2181 83.9 Plus
Dvir\GJ21163-PA 519 GJ21163-PA 9..417 63..463 749 40.8 Plus
Dvir\GJ21693-PA 784 GJ21693-PA 147..518 53..415 665 40.2 Plus
Dvir\GJ17767-PA 835 GJ17767-PA 408..791 62..412 630 36.4 Plus
Dvir\GJ13322-PA 797 GJ13322-PA 284..635 66..411 591 36.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:34:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21047-PA 507 GK21047-PA 1..507 1..507 2259 86.5 Plus
Dwil\GK23245-PA 506 GK23245-PA 8..417 62..463 750 40.9 Plus
Dwil\GK15774-PA 792 GK15774-PA 154..520 56..415 661 39.7 Plus
Dwil\GK24389-PA 808 GK24389-PA 381..764 62..412 632 36.4 Plus
Dwil\GK13754-PA 839 GK13754-PA 306..657 66..411 594 36.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:34:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12898-PA 522 GE12898-PA 1..522 1..507 2421 92.1 Plus
Dyak\GE19250-PA 527 GE19250-PA 12..417 66..463 747 40.6 Plus
Dyak\GE19181-PA 782 GE19181-PA 152..518 56..415 670 40.5 Plus
Dyak\GE13195-PA 821 GE13195-PA 394..777 62..412 630 36.4 Plus
Dyak\GE20258-PA 789 GE20258-PA 274..625 66..411 604 37.5 Plus