Clone FI20113 Report

Search the DGRC for FI20113

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:13
Vector:pFlc-1
Associated Gene/TranscriptCG33523-RD
Protein status:FI20113.pep: gold
Sequenced Size:2397

Clone Sequence Records

FI20113.complete Sequence

2397 bp assembled on 2012-04-17

GenBank Submission: BT133454.1

> FI20113.complete
AGTCTTGCCACAAGCTTGGTAGCGAACGAGTGCGAAAACTAACTGGCAGC
ATGGGCGTCAAGGTCAAGGAAACGACACCCCAGCAAATCGAGGAGCTGCG
CGATAGGTTCAATCGCAAATATGCCTCATCCCCTCCGGCAGCACCTTTCC
ATCCGACCGATATTGATCGTATTCGCAACGATCATCTGTGGCTTCAAAGG
TTTCTGGAAATGTATGATCTCGACATGGAGACCTCCTTTAATTCGCTGTG
GGAAACCTGTATCTTGCGTCAGTCAACTGGGGCAAACGATATCGATGAGA
GCGAGTTGAACCAGGAGTATTTGAAGGAGGGATCCGTGTTTGTGCACAAC
ACTGATGTGGATGGCAAGCCGTTGTTGGTATTCCGCGTTAAGATGCACAG
TAAGTCCAAGAACCTGGACGAACTGATACGCATCGTGGTGTACTGGGTGG
AAAGGACTCAGAGGGAGCAGCATCTGACCCAGTTGACCATATTCTTCGAC
ATGTCGGGCACGAGTTTGGCCTCCATGGATCTGGAGTTTGTGAAACGCAT
TGTGGAGACATTTAAGCAGTTCTATCCCAATAGCTTGAACTACATTTTGG
TATATGAACTGGGCTGGGTACTAAATGCTGCTTTTAAGGTCATCAAGGCG
GTGCTGCCACCCAAAGCGGTTGAGATTTTAAAAATGATATCGAAAAAGGA
CATCAACCAGTACATTAACAAGGATAACTGCCTGGCCATCTGGGGTGGCG
AGGATAACTACGAATTTAGCTTTGTGCCGGAGGCTAAAAAGGTCATTTCC
AAACCGGTGGCTGCCAATGCTGGCGATGATGACCAATTCGCGGACAAAAA
GGTCACCTTTGTCGATTCCGCTCCCATGGTGCTCAAGGAGACCAACATCA
ACAAGATGCACACTCCATCCGAGGGCATGTTGCACATCAATCCCAAGGAT
TTTGTCAACTTCAATTCCAAGAATGCGGAAGCCACGATGACCATCAAGTC
TATTGCCACCTCGGCAGTGACGTACAAGATCCAAACCACATCGCCGGAGA
AGTTCCGTGTGCGACCACGTTGCGGCATCATCCAGCCCAATCAGGAGGCC
ACCATCAACATATGGTTGAAGTCGGAGCACAAGCTTAGTGACGACAGCAA
GGATAAGTTCCTGGTGATGGCTATGGTCGCGCCAGGCGGTGAATGCGGTG
GCGCCGATGTGACCGAGCTGTGGCGGAGCAAATCCCCCACATCTGCGGAT
GTGGAGCAGCATCGACTGGTCTGCCGCTTCGATGAGAACAAATCAAAAGC
GCAGCTAGATTGCGCAAGCAAGTCCAGTAAGGCCAGCGTGGATTGCAGCA
AGAAGTCCGGTGCTGGCGTAGATCCAGCTACGGCAATGGAGCGTCAGTTG
GCATTCACCCAGAACCTGCAATACGTGACGCTGGCGCTGTTGTTCCTGTT
GTTTGCCGGCTTCGGCTTTCTGATGTACCAGCAGCTCGGCCAGCACGCCG
CTACCTGTCCCAAGGCAACGGCGTATTCGTGCGCTAAGCGCAAATAATAT
TTACTTAGCCCGTGCAATTTGACCAGGCAGGAGCTAGACATTGCCGCTCG
CGATAGCCACAACAATAACGAAGACGACTGCGACTGTCCAGAGCTGGAGA
ACTGTGCCTGTGCTGTTGATTTGATGAATCTAGGTCTGGACTGTGCCGAT
ACGATGGACCAATACGATGGCGAATGCCTCGAGGCACTGATACAGGCGCA
TCTGCAGCTGTGCCTCAGCTGTCAGGGCACTGGTGATTGGCAGCTGGGCG
GCGTTGCTGCCGGCGGCCATTTGCTGGGATTCATCGCATTCGCAAGGAAG
ATGGTGCGCGTCGTTCTTTCGCTATCGCTGCTGTGCGGCATCTTGTTCGT
GAGCTTCTACCTGGGAAGCAACTACGGCGGAAACTCCACCACCACTACCA
TAACCACCTCCCTAGCCACAGTCGACTCAGGCAGAGGCAATCGTCAGCCG
TGTTACTACTCGTAGTGAAGCCAAAACCCTCAACTGTGCATGCCAGGGTG
GTTCGATTTGTTCAGCAGTAAATGCAACTTGTTCACCTCTGTACACGTAA
TAATCCATTTTGACCCTTGCCAGGTATGAAAACTACAAATATTAAAGCCT
TCTTACATACTTCAATGGCTTGCATTCATGAATTCCCGGGTCCTGCGAAT
TGTTTAGACACCTTTGCTTTTAAAGGTAATTTTAAGATGTTTCCCTTCAT
TGCAAATCGAACCACCCTCCAAGCAAATACATATTTTTGTATAAATCTTA
AGACCTACCATAAGAGTAACAATTTCGTGTTTCCTGATATTATTGAGTAA
ATGATGTCTCGCGCTTACGAGACAATCTCCCAAAAAAAAAAAAAAAA

FI20113.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 5921700..5922716 1365..2381 4950 99.1 Plus
chr3L 24539361 chr3L 5917419..5917906 140..627 2410 99.6 Plus
chr3L 24539361 chr3L 5921298..5921636 1027..1365 1680 99.7 Plus
chr3L 24539361 chr3L 5917984..5918210 627..853 1090 98.7 Plus
chr3L 24539361 chr3L 5916629..5916769 1..141 690 99.3 Plus
chr3L 24539361 chr3L 5921132..5921236 924..1028 525 100 Plus
chr3L 24539361 chr3L 5920818..5920893 850..925 380 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:03
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5929104..5930122 1365..2383 5095 100 Plus
3L 28110227 3L 5924835..5925322 140..627 2440 100 Plus
3L 28110227 3L 5928702..5929040 1027..1365 1695 100 Plus
3L 28110227 3L 5925400..5925626 627..853 1135 100 Plus
3L 28110227 3L 5924055..5924195 1..141 705 100 Plus
3L 28110227 3L 5928536..5928640 924..1028 525 100 Plus
3L 28110227 3L 5928222..5928297 850..925 380 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:45:04 has no hits.

FI20113.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:45:46 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 5916629..5916769 1..141 99 -> Plus
chr3L 5917421..5917906 142..627 99 -> Plus
chr3L 5917985..5918208 628..851 98 -> Plus
chr3L 5920820..5920892 852..924 100 -> Plus
chr3L 5921133..5921236 925..1028 100 -> Plus
chr3L 5921300..5921635 1029..1364 99 -> Plus
chr3L 5921700..5922716 1365..2381 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-17 17:25:36 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
CG33523-RD 1..1497 51..1547 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:11:59 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
CG33523-RF 1..1965 51..2015 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:40:32 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
Vap-33B-RF 1..1965 51..2015 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-17 17:25:36 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
CG33523-RD 1..2381 1..2381 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:11:59 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
CG33523-RD 3..2383 1..2381 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:40:32 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
Vap-33B-RD 194..2574 1..2381 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:46 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5924055..5924195 1..141 100 -> Plus
3L 5924837..5925322 142..627 100 -> Plus
3L 5925401..5925624 628..851 100 -> Plus
3L 5928224..5928296 852..924 100 -> Plus
3L 5928537..5928640 925..1028 100 -> Plus
3L 5928704..5929039 1029..1364 100 -> Plus
3L 5929104..5930120 1365..2381 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:46 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5924055..5924195 1..141 100 -> Plus
3L 5924837..5925322 142..627 100 -> Plus
3L 5925401..5925624 628..851 100 -> Plus
3L 5928224..5928296 852..924 100 -> Plus
3L 5928537..5928640 925..1028 100 -> Plus
3L 5928704..5929039 1029..1364 100 -> Plus
3L 5929104..5930120 1365..2381 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:46 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5924055..5924195 1..141 100 -> Plus
3L 5924837..5925322 142..627 100 -> Plus
3L 5925401..5925624 628..851 100 -> Plus
3L 5928224..5928296 852..924 100 -> Plus
3L 5928537..5928640 925..1028 100 -> Plus
3L 5928704..5929039 1029..1364 100 -> Plus
3L 5929104..5930120 1365..2381 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:11:59 Download gff for FI20113.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5917155..5917295 1..141 100 -> Plus
arm_3L 5917937..5918422 142..627 100 -> Plus
arm_3L 5918501..5918724 628..851 100 -> Plus
arm_3L 5921324..5921396 852..924 100 -> Plus
arm_3L 5921637..5921740 925..1028 100 -> Plus
arm_3L 5921804..5922139 1029..1364 100 -> Plus
arm_3L 5922204..5923220 1365..2381 100   Plus

FI20113.hyp Sequence

Translation from 2 to 1546

> FI20113.hyp
SCHKLGSERVRKLTGSMGVKVKETTPQQIEELRDRFNRKYASSPPAAPFH
PTDIDRIRNDHLWLQRFLEMYDLDMETSFNSLWETCILRQSTGANDIDES
ELNQEYLKEGSVFVHNTDVDGKPLLVFRVKMHSKSKNLDELIRIVVYWVE
RTQREQHLTQLTIFFDMSGTSLASMDLEFVKRIVETFKQFYPNSLNYILV
YELGWVLNAAFKVIKAVLPPKAVEILKMISKKDINQYINKDNCLAIWGGE
DNYEFSFVPEAKKVISKPVAANAGDDDQFADKKVTFVDSAPMVLKETNIN
KMHTPSEGMLHINPKDFVNFNSKNAEATMTIKSIATSAVTYKIQTTSPEK
FRVRPRCGIIQPNQEATINIWLKSEHKLSDDSKDKFLVMAMVAPGGECGG
ADVTELWRSKSPTSADVEQHRLVCRFDENKSKAQLDCASKSSKASVDCSK
KSGAGVDPATAMERQLAFTQNLQYVTLALLFLLFAGFGFLMYQQLGQHAA
TCPKATAYSCAKRK*

FI20113.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:00
Subject Length Description Subject Range Query Range Score Percent Strand
Vap-33B-PF 654 CG33523-PF 1..498 17..514 2592 100 Plus
Vap-33B-PD 498 CG33523-PD 1..498 17..514 2592 100 Plus
Vap-33B-PE 285 CG33523-PE 1..271 17..287 1404 98.9 Plus
Vap-33B-PA 234 CG33523-PA 3..234 283..514 1199 99.6 Plus
Vap-33B-PC 240 CG33523-PC 10..240 284..514 1197 100 Plus

FI20113.pep Sequence

Translation from 2 to 1546

> FI20113.pep
SCHKLGSERVRKLTGSMGVKVKETTPQQIEELRDRFNRKYASSPPAAPFH
PTDIDRIRNDHLWLQRFLEMYDLDMETSFNSLWETCILRQSTGANDIDES
ELNQEYLKEGSVFVHNTDVDGKPLLVFRVKMHSKSKNLDELIRIVVYWVE
RTQREQHLTQLTIFFDMSGTSLASMDLEFVKRIVETFKQFYPNSLNYILV
YELGWVLNAAFKVIKAVLPPKAVEILKMISKKDINQYINKDNCLAIWGGE
DNYEFSFVPEAKKVISKPVAANAGDDDQFADKKVTFVDSAPMVLKETNIN
KMHTPSEGMLHINPKDFVNFNSKNAEATMTIKSIATSAVTYKIQTTSPEK
FRVRPRCGIIQPNQEATINIWLKSEHKLSDDSKDKFLVMAMVAPGGECGG
ADVTELWRSKSPTSADVEQHRLVCRFDENKSKAQLDCASKSSKASVDCSK
KSGAGVDPATAMERQLAFTQNLQYVTLALLFLLFAGFGFLMYQQLGQHAA
TCPKATAYSCAKRK*

FI20113.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:34:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24005-PA 662 GF24005-PA 1..504 17..509 1953 74.4 Plus
Dana\GF24004-PA 240 GF24004-PA 5..239 22..257 694 50.8 Plus
Dana\GF23828-PA 176 GF23828-PA 26..142 309..425 184 30.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:34:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15302-PA 497 GG15302-PA 1..497 17..514 2335 88.4 Plus
Dere\GG15300-PA 241 GG15300-PA 5..240 22..257 681 49.2 Plus
Dere\GG13971-PA 166 GG13971-PA 8..122 310..424 192 32.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:34:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14689-PA 482 GH14689-PA 1..482 17..514 1528 57.4 Plus
Dgri\GH14688-PA 243 GH14688-PA 6..240 23..257 700 49.4 Plus
Dgri\GH14569-PA 223 GH14569-PA 38..217 64..241 151 23.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG33523-PF 654 CG33523-PF 1..498 17..514 2592 100 Plus
CG33523-PD 498 CG33523-PD 1..498 17..514 2592 100 Plus
CG33523-PE 285 CG33523-PE 1..271 17..287 1404 98.9 Plus
CG33523-PA 234 CG33523-PA 3..234 283..514 1199 99.6 Plus
CG33523-PC 240 CG33523-PC 10..240 284..514 1197 100 Plus
CG33523-PB 206 CG33523-PB 1..206 309..514 1068 100 Plus
CG32407-PB 241 CG32407-PB 5..240 22..257 668 47.9 Plus
CG32407-PA 241 CG32407-PA 5..240 22..257 668 47.9 Plus
CG6527-PB 166 CG6527-PB 8..141 310..443 186 28.4 Plus
CG6527-PA 166 CG6527-PA 8..141 310..443 186 28.4 Plus
CG32485-PA 222 CG32485-PA 38..216 64..241 155 22.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:34:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13304-PA 504 GI13304-PA 1..504 17..514 1642 63.7 Plus
Dmoj\GI13303-PA 243 GI13303-PA 6..240 23..257 690 49.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:34:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21079-PA 498 GL21079-PA 1..497 17..514 1784 67.9 Plus
Dper\GL21069-PA 241 GL21069-PA 8..240 25..257 699 51.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:34:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28323-PA 498 GA28323-PA 1..497 17..514 1786 67.9 Plus
Dpse\GA16879-PA 241 GA16879-PA 8..240 25..257 699 51.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14735-PA 497 GM14735-PA 1..497 17..514 2442 92.8 Plus
Dsec\GM14734-PA 241 GM14734-PA 5..240 22..257 682 48.7 Plus
Dsec\GM24808-PA 162 GM24808-PA 8..141 310..443 191 29.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13915-PA 240 GD13915-PA 10..240 284..514 1216 97 Plus
Dsim\GD13914-PA 236 GD13914-PA 1..208 75..283 995 87.6 Plus
Dsim\GD13913-PA 241 GD13913-PA 5..240 22..257 684 49.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12072-PA 487 GJ12072-PA 1..487 17..514 1569 60.7 Plus
Dvir\GJ12071-PA 243 GJ12071-PA 6..242 23..259 751 54 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16664-PA 638 GK16664-PA 1..429 17..426 1567 67.9 Plus
Dwil\GK16663-PA 241 GK16663-PA 3..240 20..257 690 50 Plus
Dwil\GK12362-PA 144 GK12362-PA 3..122 307..425 157 25 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21523-PA 641 GE21523-PA 1..493 17..509 2382 90.9 Plus
Dyak\GE21522-PA 241 GE21522-PA 5..240 22..257 698 50 Plus
Dyak\GE20270-PA 174 GE20270-PA 8..122 310..424 190 31.3 Plus