Clone FI20121 Report

Search the DGRC for FI20121

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:21
Vector:pFlc-1
Associated Gene/TranscriptCG8009-RA
Protein status:FI20121.pep: gold
Sequenced Size:859

Clone Sequence Records

FI20121.complete Sequence

859 bp assembled on 2012-04-04

GenBank Submission: BT133352.1

> FI20121.complete
GCTTTCAAACGTGGAATGTCATCAAAAACATAAAAAGAGGAAAAGAAAGC
TATGAGAACCTCATCAAATAATAATAATAAATACAATAATATTTAAACTG
GACAAATTTAATCGCATTAAGACGGCCACGAGCTTTGAGGAAATAGCTGC
AATGGAACCGTCAGCCTGCGAAGATCTCAAGGCCTTCGAGCGGCGCCTCA
CCGAAGTGGTTTCATCGTACCGTCCCTCGACGTTCCGCTGGCGCATTGTC
CTTTCCGCCATGTCCATGTGCACCGCCATCAGCGCCTGGTACTGGCTACG
CGATCCGCGCACCACCGTTGTACCGCTAACGGAGTCCCTCTGGATTCATC
CCGTCTTCACAGTCGCCACCCTAACATTGGTCGTCCTGTTCATCCTGGGC
ATACAGAAACTAGTCATAGCTCCGCAAATAATTACATCGAGAACGCGAAT
GGTACTGGGAGACTTTAATATGAGCTGTGACGACACGGGGAAGCTGATAC
TCAAGCCGCGGCAAAGTAACAACAACAGTACATGAGCACCGGCCAGCTTC
CAGGACGTTTATTTAGTTAATTGCTAGTTCCCTTACCCTTTTCTTTTTTC
CTACATGTTGATTCGGACACCCTCGCTTTGTAAGCGTATTTTTAAAGTAC
CTCTTATTTCTCCCTACACATTTTGTTTAATTATAGAAGCTCCTTTGTAC
AAAAAAACAAAAAGAAAAGAAATCAATTGTTAAGCTTTATGTGTTTCGTT
AATGGCGTTACCCATCGCTGCCAAATACACCAAGCGACATTTCAATATCA
ATTCATCTATAACTAACGAGTTGCTCGCAAATTGTGCAACGGCAAAAAAA
AAAAAAAAA

FI20121.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:15:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 10630603..10631065 380..841 2175 98.5 Plus
chr3L 24539361 chr3L 10629550..10629722 1..173 835 98.8 Plus
chr3L 24539361 chr3L 10629963..10630097 246..380 645 98.5 Plus
chr3L 24539361 chr3L 10629818..10629891 172..245 370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10639214..10639680 380..845 2270 99.6 Plus
3L 28110227 3L 10638153..10638325 1..173 850 99.4 Plus
3L 28110227 3L 10638566..10638700 246..380 675 100 Plus
3L 28110227 3L 10638421..10638494 172..245 370 100 Plus
Blast to na_te.dros performed 2019-03-15 13:15:17
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy8 4955 gypsy8 GYPSY8 4955bp 939..977 235..198 111 79.5 Minus

FI20121.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:16:20 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 10629550..10629722 1..173 98 -> Plus
chr3L 10629820..10629891 174..245 100 -> Plus
chr3L 10629963..10630097 246..380 98 -> Plus
chr3L 10630604..10631067 381..843 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-04 13:43:33 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8009-RA 1..384 152..535 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:59:52 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8009-RA 1..384 152..535 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:26:05 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8009-RA 1..384 152..535 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-04 13:43:33 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8009-RA 1..797 1..796 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:59:52 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8009-RB 8..238 1..231 99 -> Plus
CG8009-RB 255..863 232..843 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:26:05 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
CG8009-RB 8..238 1..231 99 -> Plus
CG8009-RB 255..863 232..843 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:20 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10638153..10638325 1..173 99 -> Plus
3L 10638423..10638494 174..245 100 -> Plus
3L 10638566..10638700 246..380 100 -> Plus
3L 10639215..10639678 381..843 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:20 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10638153..10638325 1..173 99 -> Plus
3L 10638423..10638494 174..245 100 -> Plus
3L 10638566..10638700 246..380 100 -> Plus
3L 10639215..10639678 381..843 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:20 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10638153..10638325 1..173 99 -> Plus
3L 10638423..10638494 174..245 100 -> Plus
3L 10638566..10638700 246..380 100 -> Plus
3L 10639215..10639678 381..843 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:59:52 Download gff for FI20121.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10631253..10631425 1..173 99 -> Plus
arm_3L 10631523..10631594 174..245 100 -> Plus
arm_3L 10631666..10631800 246..380 100 -> Plus
arm_3L 10632315..10632778 381..843 99   Plus

FI20121.hyp Sequence

Translation from 151 to 534

> FI20121.hyp
MEPSACEDLKAFERRLTEVVSSYRPSTFRWRIVLSAMSMCTAISAWYWLR
DPRTTVVPLTESLWIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRM
VLGDFNMSCDDTGKLILKPRQSNNNST*

FI20121.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG8009-PA 127 CG8009-PA 1..127 1..127 656 100 Plus
CG8009-PB 131 CG8009-PB 1..131 1..127 640 96.2 Plus
CG41106-PA 123 CG41106-PA 1..122 1..122 205 37.7 Plus

FI20121.pep Sequence

Translation from 151 to 534

> FI20121.pep
MEPSACEDLKAFERRLTEVVSSYRPSTFRWRIVLSAMSMCTAISAWYWLR
DPRTTVVPLTESLWIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRM
VLGDFNMSCDDTGKLILKPRQSNNNST*

FI20121.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10599-PA 127 GF10599-PA 1..127 1..127 645 96.1 Plus
Dana\GF22019-PA 125 GF22019-PA 5..122 1..119 214 37 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:10:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15442-PA 127 GG15442-PA 1..127 1..127 652 96.9 Plus
Dere\GG19757-PA 123 GG19757-PA 1..123 1..123 222 38.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:10:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14952-PA 130 GH14952-PA 1..127 1..126 553 83.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG8009-PA 127 CG8009-PA 1..127 1..127 656 100 Plus
CG8009-PB 131 CG8009-PB 1..131 1..127 640 96.2 Plus
CG41106-PA 123 CG41106-PA 1..122 1..122 205 37.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:10:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\Tes100-PA 159 GI11479-PA 1..125 1..124 550 81.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:10:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15473-PA 131 GL15473-PA 1..131 1..127 610 89.3 Plus
Dper\GL23141-PA 126 GL23141-PA 1..126 1..127 528 78.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:10:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23834-PA 131 GA23834-PA 1..131 1..127 610 89.3 Plus
Dpse\GA27154-PA 126 GA27154-PA 1..126 1..127 523 78.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:10:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25217-PA 127 GM25217-PA 1..127 1..127 665 100 Plus
Dsec\GM10063-PA 123 GM10063-PA 1..123 1..123 222 38.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17576-PA 123 GD17576-PA 1..123 1..123 222 38.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:10:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13672-PA 129 GJ13672-PA 1..127 1..126 565 85 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12275-PA 127 GK12275-PA 1..127 1..127 637 92.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:10:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21752-PA 127 GE21752-PA 1..127 1..127 655 97.6 Plus
Dyak\GE17951-PA 1425 GE17951-PA 1303..1424 1..122 221 39.3 Plus