Clone FI20128 Report

Search the DGRC for FI20128

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:28
Vector:pFlc-1
Associated Gene/TranscriptCG31321-RB
Protein status:FI20128.pep: gold
Sequenced Size:2207

Clone Sequence Records

FI20128.complete Sequence

2207 bp assembled on 2012-04-18

GenBank Submission: BT133464.1

> FI20128.complete
GAGTCTGAGCTTAGAACCTGGCGCGACGTGTTGATCAAATCGCTTAAAAT
GTGCTGCTAGAGCAACCTGCCGAGCCAGAGACGTATCGAATCGAATAGAA
TCGTATAAAAAATAAGAGTTTTGAGGAATTCAGCAAGTGCTATAAAAAAA
TGGCAAAGCCAAGGTCATCGGCAGATGCGGCTGGAAATGGCAGTGGAGCA
GTGGATGCAGAGCCCAAGCTCAACTATTTCCAGAAACTGTGGCGCTATCG
CCACTATCTGGTCATCGAGCCCTTCTTCTTTTTCTACTTCATGGCCTCCG
TGTTCAATGCGGTGGCCATGCAGAATTTCCCACTGGACAAGGCGTGTCGC
GTGAATCTCGGCTACAACAAGATCGTCTGCGACACAATGCTGGACAAATC
GGAGCTGGGCATCGAGTGCGATGACTTTGATTTCGAGAACACCACACAGG
GCGCGACGCCGGATCTCGCTGACCTTGTCATCGGAGCCACTGGCTTCAAC
TACACGGTGTGCAAGGCGGAACTGGAGGCACAGATCCTGGCGGCAGATGT
CTCCGGGAAACGAGCTCCCATGGCTGCCATTTTCCCGCTGATTGTCTTAC
TTTTTGCTGGAGGATGGGCAGATCGATACAACAAACGAAAGCCTTGCATG
ATAATGCCAATTATTGGAGAGGCATTATCTTTCACCTGTCAGATTATCTC
ATCGATTTTTTTTGAATCGCTGCCAATGGAGTTTGGCGCCTACTGTGAGG
CTATAGTTCCAGCTCTCTTCGGAGGATTAACCTTCTGTTTGATGGCAATC
TATAGCTACATCACCATAGCCACGCCGGAGGAGGATCGCGTGTTCCGTTT
CGGCATCTTTGCCATGTTCGTCACTGGAGTTCCGTTTATAGGACAACCGA
TTAGTGGAGTTCTCTTCACAACTTTGGGCTACACATGGTCCTTTGCCTCC
GCCATTGTCTTTCAGCTGATTGCGATATTTTACATAATTTTCTTCATAAA
AGAGGTGAAGACCACGCCCACCACCAGCACCACTGCGAATGAGCCACCAC
CACTGCCCACCAGTCTGCCGCCCAAGCAGCAGGGAGCCGACAATATGGCC
TACGAGACCACCAATTTGGATGAGCTGCAGGGTAACAAGAACGTCAACTT
CCAGCTAACTCCGCAAATGGAGCCCAAAGTGGAGGTGGTGCCGCCAAAAC
GATCACTCTTGAAGGAACTTTTCGATCCCACCCTGGTGCTGGACTGCATC
CGTTTTCCGCTGGTCAAGCGACCCAATAACGGCAGAATGTTGCTAATCCT
GCTGCTGTGTGCCTACTTCCTGACCGTCGGGCCCACTTCCGGTGAGAACG
ACTATTGGTATCGATTCACGCTGAAGAAGCTCGCCTGGAACGGCAACGAC
TTTAGTATCTACCTCACCCTGTCCAGTGGCGCTGCACTGGTGGGCACCTT
CATTGGCACTGCCATCTTGAGCAAGCTACTCAAGGTCTCCGACTCCATGA
TTGGCATGCTCTCCGCCCTGTCCATTGTCTGTTCCCGCGTCCTTTTCGCC
TTCTCCAGCAGCACTGCCTCATTTTACGTTGCTGGTGTGGTGGACATGTT
CGTCAGTCTGCGAGTGATTGCCATCAAGACCATCGGTTCGAGCATTGTGG
CTGGCGACGAGCTGAGCAAAATGTACTCCATCTTTGGCATCAGTGAGCCA
ATTGCCCAATTCATTTTCCCGCCAATCTTCAGTGAGATTTACAAGAGCAC
GGTGGATTCATTCCCAGGTGCCATTTGGCTCTTTGGCGAAATCTTCTACA
TTCCCAATGTCTTGGTCTTCGTTGTGTGCTACTTCCTGCTGCGGCGTCGA
AAGGCCAACGAGGAGAAGAGCGTCGTGGAAATGGAGCAGAATGGTGGAGC
AAATGGTGGCAATCGGGCAAGCGTGGTGCCCGATAGCGAAATAACTAGTC
TGTAACGTACTTAATGCCAGTCCGTGTTATATATATATTTTTATATATTT
ATAATATAAATTGTATATTTTTTGTATATTTATAGGGAATTTTTATAGCA
TTTTATATTACCAACGAGTTATCTTTAACTTTCATTTGCTGAAAGTGTGA
GTTTAAAGTTAGTAAGCATATTAAAAACAGTTGTAACTAGTCCACATATA
ACTTAATTAAAGTCGTTGCTATTTTTGGCCGAGTCCATTTGCAAAAAAAA
AAAAAAA

FI20128.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:48:17
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 10135197..10135768 2..573 2860 100 Plus
chr3R 27901430 chr3R 10138862..10139232 1823..2192 1805 99.7 Plus
chr3R 27901430 chr3R 10137581..10137929 937..1285 1730 99.7 Plus
chr3R 27901430 chr3R 10137982..10138247 1283..1548 1270 98.5 Plus
chr3R 27901430 chr3R 10137264..10137513 688..937 1250 100 Plus
chr3R 27901430 chr3R 10138639..10138795 1666..1822 785 100 Plus
chr3R 27901430 chr3R 10137091..10137207 573..689 585 100 Plus
chr3R 27901430 chr3R 10138310..10138428 1548..1666 580 99.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14310368..14310939 2..573 2860 100 Plus
3R 32079331 3R 14314042..14314415 1823..2195 1820 99.7 Plus
3R 32079331 3R 14312753..14313101 937..1285 1745 100 Plus
3R 32079331 3R 14313162..14313427 1283..1548 1330 100 Plus
3R 32079331 3R 14312438..14312687 688..937 1250 100 Plus
3R 32079331 3R 14313819..14313975 1666..1822 785 100 Plus
3R 32079331 3R 14313490..14313608 1548..1666 595 100 Plus
3R 32079331 3R 14312265..14312381 573..689 585 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:48:15 has no hits.

FI20128.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:49:07 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 10135196..10135768 1..573 99 -> Plus
chr3R 10137092..10137205 574..687 100 -> Plus
chr3R 10137264..10137512 688..936 100 -> Plus
chr3R 10137581..10137929 937..1285 99 -> Plus
chr3R 10137985..10138246 1286..1547 98 -> Plus
chr3R 10138310..10138427 1548..1665 99 -> Plus
chr3R 10138639..10138795 1666..1822 100 -> Plus
chr3R 10138862..10139016 1823..1977 100 == Plus
chr3R 10139074..10139232 2035..2192 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-18 11:09:43 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
CG31321-RB 1..1806 150..1955 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:13:09 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
CG31321-RB 1..1806 150..1955 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:41:29 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
CG31321-RB 1..1806 150..1955 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 11:09:42 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
CG31321-RB 2..2193 2..2192 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:13:09 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
CG31321-RB 5..2197 1..2192 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:41:29 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
CG31321-RB 6..2198 1..2192 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:49:07 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14310367..14310939 1..573 99 -> Plus
3R 14312266..14312379 574..687 100 -> Plus
3R 14312438..14312686 688..936 100 -> Plus
3R 14312753..14313101 937..1285 100 -> Plus
3R 14313165..14313426 1286..1547 100 -> Plus
3R 14313490..14313607 1548..1665 100 -> Plus
3R 14313819..14313975 1666..1822 100 -> Plus
3R 14314042..14314412 1823..2192 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:49:07 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14310367..14310939 1..573 99 -> Plus
3R 14312266..14312379 574..687 100 -> Plus
3R 14312438..14312686 688..936 100 -> Plus
3R 14312753..14313101 937..1285 100 -> Plus
3R 14313165..14313426 1286..1547 100 -> Plus
3R 14313490..14313607 1548..1665 100 -> Plus
3R 14313819..14313975 1666..1822 100 -> Plus
3R 14314042..14314412 1823..2192 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:49:07 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14310367..14310939 1..573 99 -> Plus
3R 14312266..14312379 574..687 100 -> Plus
3R 14312438..14312686 688..936 100 -> Plus
3R 14312753..14313101 937..1285 100 -> Plus
3R 14313165..14313426 1286..1547 100 -> Plus
3R 14313490..14313607 1548..1665 100 -> Plus
3R 14313819..14313975 1666..1822 100 -> Plus
3R 14314042..14314412 1823..2192 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:13:09 Download gff for FI20128.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10137988..10138101 574..687 100 -> Plus
arm_3R 10138160..10138408 688..936 100 -> Plus
arm_3R 10136089..10136661 1..573 99 -> Plus
arm_3R 10138475..10138823 937..1285 100 -> Plus
arm_3R 10138887..10139148 1286..1547 100 -> Plus
arm_3R 10139212..10139329 1548..1665 100 -> Plus
arm_3R 10139541..10139697 1666..1822 100 -> Plus
arm_3R 10139764..10140134 1823..2192 99   Plus

FI20128.pep Sequence

Translation from 149 to 1954

> FI20128.pep
MAKPRSSADAAGNGSGAVDAEPKLNYFQKLWRYRHYLVIEPFFFFYFMAS
VFNAVAMQNFPLDKACRVNLGYNKIVCDTMLDKSELGIECDDFDFENTTQ
GATPDLADLVIGATGFNYTVCKAELEAQILAADVSGKRAPMAAIFPLIVL
LFAGGWADRYNKRKPCMIMPIIGEALSFTCQIISSIFFESLPMEFGAYCE
AIVPALFGGLTFCLMAIYSYITIATPEEDRVFRFGIFAMFVTGVPFIGQP
ISGVLFTTLGYTWSFASAIVFQLIAIFYIIFFIKEVKTTPTTSTTANEPP
PLPTSLPPKQQGADNMAYETTNLDELQGNKNVNFQLTPQMEPKVEVVPPK
RSLLKELFDPTLVLDCIRFPLVKRPNNGRMLLILLLCAYFLTVGPTSGEN
DYWYRFTLKKLAWNGNDFSIYLTLSSGAALVGTFIGTAILSKLLKVSDSM
IGMLSALSIVCSRVLFAFSSSTASFYVAGVVDMFVSLRVIAIKTIGSSIV
AGDELSKMYSIFGISEPIAQFIFPPIFSEIYKSTVDSFPGAIWLFGEIFY
IPNVLVFVVCYFLLRRRKANEEKSVVEMEQNGGANGGNRASVVPDSEITS
L*

FI20128.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:38:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16164-PA 597 GF16164-PA 1..597 1..601 2764 89.5 Plus
Dana\GF21601-PA 600 GF21601-PA 49..540 13..586 646 28.9 Plus
Dana\GF16600-PA 495 GF16600-PA 4..488 39..572 292 23 Plus
Dana\GF12949-PA 574 GF12949-PA 24..574 35..577 285 22.5 Plus
Dana\GF11962-PA 505 GF11962-PA 18..484 1..564 256 21.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16848-PA 606 GG16848-PA 1..606 1..601 3078 96.2 Plus
Dere\GG19451-PA 596 GG19451-PA 54..534 28..586 612 28.6 Plus
Dere\GG11889-PA 520 GG11889-PA 24..513 39..568 300 25.1 Plus
Dere\GG10578-PA 566 GG10578-PA 24..552 35..565 274 23.9 Plus
Dere\GG23422-PA 508 GG23422-PA 22..487 4..564 248 21.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18696-PA 596 GH18696-PA 23..596 21..601 2261 75.1 Plus
Dgri\GH12216-PA 603 GH12216-PA 34..526 10..585 662 28.4 Plus
Dgri\GH19871-PA 546 GH19871-PA 4..534 39..565 256 21.9 Plus
Dgri\GH14344-PA 590 GH14344-PA 8..584 15..573 254 22.5 Plus
Dgri\GH22011-PA 513 GH22011-PA 21..476 2..541 196 22.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG31321-PB 601 CG31321-PB 1..601 1..601 3103 100 Plus
CG15890-PB 599 CG15890-PB 48..535 15..585 605 28.3 Plus
CG15890-PA 599 CG15890-PA 48..535 15..585 605 28.3 Plus
CG15553-PC 521 CG15553-PC 23..507 39..565 327 23.5 Plus
CG8008-PB 566 CG8008-PB 28..552 39..565 294 22.5 Plus
CG30344-PA 507 CG30344-PA 51..486 36..564 265 20.6 Plus
CG8008-PA 439 CG8008-PA 28..425 198..565 229 23.2 Plus
CG8046-PA 519 CG8046-PA 32..493 3..550 214 21 Plus
CG8046-PB 388 CG8046-PB 9..362 146..550 178 22 Plus
CG42514-PC 531 CG32158-PD 268..511 343..579 172 23.3 Plus
CG42514-PB 533 CG32158-PE 270..513 343..579 172 23.3 Plus
CG42514-PA 533 CG32158-PC 270..513 343..579 172 23.3 Plus
CG30345-PB 496 CG30345-PB 270..472 352..561 170 24.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:38:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10815-PA 587 GI10815-PA 2..587 11..601 2166 71.8 Plus
Dmoj\GI10816-PA 590 GI10816-PA 12..590 17..601 1818 60.6 Plus
Dmoj\GI15748-PA 595 GI15748-PA 47..527 28..586 657 29.8 Plus
Dmoj\GI19820-PA 551 GI19820-PA 4..544 39..572 300 23.4 Plus
Dmoj\GI10439-PA 584 GI10439-PA 19..578 31..573 272 22.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23271-PA 591 GL23271-PA 1..591 1..601 2507 82.3 Plus
Dper\GL20411-PA 598 GL20411-PA 59..539 28..586 655 28.8 Plus
Dper\GL17463-PA 564 GL17463-PA 24..564 35..577 292 22.8 Plus
Dper\GL13958-PA 510 GL13958-PA 24..507 39..572 250 23.7 Plus
Dper\GL17011-PA 491 GL17011-PA 35..467 37..561 215 20.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16179-PA 598 GA16179-PA 1..598 1..601 2635 85.5 Plus
Dpse\GA14008-PA 608 GA14008-PA 69..549 28..586 655 28.8 Plus
Dpse\GA20763-PA 564 GA20763-PA 24..564 35..577 292 22.8 Plus
Dpse\GA13811-PB 510 GA13811-PB 14..507 29..572 250 23.6 Plus
Dpse\GA15775-PA 509 GA15775-PA 43..488 22..564 244 22.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24159-PA 599 GM24159-PA 1..599 1..601 2797 95.3 Plus
Dsec\GM12041-PA 615 GM12041-PA 43..245 10..244 326 31.8 Plus
Dsec\GM12108-PA 498 GM12108-PA 3..484 21..565 284 24.5 Plus
Dsec\GM20626-PA 566 GM20626-PA 24..560 35..573 271 22.9 Plus
Dsec\GM21103-PA 507 GM21103-PA 49..486 33..564 230 20.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:38:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18954-PA 601 GD18954-PA 1..601 1..601 3134 98.5 Plus
Dsim\GD15841-PA 599 GD15841-PA 43..536 10..586 609 28 Plus
Dsim\GD16622-PA 498 GD16622-PA 3..484 21..565 285 24.8 Plus
Dsim\GD10099-PA 566 GD10099-PA 24..560 35..573 281 23 Plus
Dsim\GD10638-PA 508 GD10638-PA 49..486 33..564 221 20.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:38:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14414-PA 594 GJ14414-PA 2..594 10..601 2258 73.4 Plus
Dvir\GJ18608-PA 594 GJ18608-PA 34..529 9..585 685 29.5 Plus
Dvir\GJ18575-PA 567 GJ18575-PA 13..560 23..572 304 23.8 Plus
Dvir\GJ17523-PA 506 GJ17523-PA 28..485 5..564 231 22 Plus
Dvir\GJ10656-PA 598 GJ10656-PA 328..562 309..540 207 25.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:38:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11345-PA 593 GK11345-PA 1..593 1..601 2374 76.4 Plus
Dwil\GK23324-PA 508 GK23324-PA 2..508 7..558 1089 42.4 Plus
Dwil\GK18457-PA 620 GK18457-PA 51..527 1..568 659 29.1 Plus
Dwil\GK23339-PA 494 GK23339-PA 36..457 33..541 285 23.2 Plus
Dwil\GK22868-PA 555 GK22868-PA 24..555 35..577 277 23.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:38:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24229-PA 614 GE24229-PA 1..614 1..601 3041 94.6 Plus
Dyak\GE16105-PA 603 GE16105-PA 59..539 28..586 645 29.2 Plus
Dyak\GE23338-PA 563 GE23338-PA 15..556 31..568 320 23.5 Plus
Dyak\GE22510-PA 568 GE22510-PA 24..562 35..573 278 22.8 Plus
Dyak\GE19261-PA 509 GE19261-PA 51..488 33..564 240 20.6 Plus

FI20128.hyp Sequence

Translation from 149 to 1954

> FI20128.hyp
MAKPRSSADAAGNGSGAVDAEPKLNYFQKLWRYRHYLVIEPFFFFYFMAS
VFNAVAMQNFPLDKACRVNLGYNKIVCDTMLDKSELGIECDDFDFENTTQ
GATPDLADLVIGATGFNYTVCKAELEAQILAADVSGKRAPMAAIFPLIVL
LFAGGWADRYNKRKPCMIMPIIGEALSFTCQIISSIFFESLPMEFGAYCE
AIVPALFGGLTFCLMAIYSYITIATPEEDRVFRFGIFAMFVTGVPFIGQP
ISGVLFTTLGYTWSFASAIVFQLIAIFYIIFFIKEVKTTPTTSTTANEPP
PLPTSLPPKQQGADNMAYETTNLDELQGNKNVNFQLTPQMEPKVEVVPPK
RSLLKELFDPTLVLDCIRFPLVKRPNNGRMLLILLLCAYFLTVGPTSGEN
DYWYRFTLKKLAWNGNDFSIYLTLSSGAALVGTFIGTAILSKLLKVSDSM
IGMLSALSIVCSRVLFAFSSSTASFYVAGVVDMFVSLRVIAIKTIGSSIV
AGDELSKMYSIFGISEPIAQFIFPPIFSEIYKSTVDSFPGAIWLFGEIFY
IPNVLVFVVCYFLLRRRKANEEKSVVEMEQNGGANGGNRASVVPDSEITS
L*

FI20128.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG31321-PB 601 CG31321-PB 1..601 1..601 3103 100 Plus
CG15890-PB 599 CG15890-PB 48..535 15..585 605 28.3 Plus
CG15890-PA 599 CG15890-PA 48..535 15..585 605 28.3 Plus
CG15553-PC 521 CG15553-PC 23..507 39..565 327 23.5 Plus
CG8008-PB 566 CG8008-PB 28..552 39..565 294 22.5 Plus