BDGP Sequence Production Resources |
Search the DGRC for FI20162
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 201 |
Well: | 62 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Su(var)3-7-RB |
Protein status: | FI20162.pep: gold |
Sequenced Size: | 4265 |
4265 bp assembled on 2012-04-12
GenBank Submission: BT133434.1
> FI20162.complete GGTTTAATGCAACAGTACGGTCACATTGGCCATCGCCTTGACAGCGATTC TGAGTTTTCGCTTGCGATTATTTTTATTTTTTTAGTTTATAACCGTATAC TGTGATCTCCCAAAAGCTAACAAATATTAGAGCAAAGTGCCTGGATAACC AGTATCTCGTGATGGATCGGGATTCGAGCATGCAGGCGAAAAACCTAGAT GCTCAATGCAACCCAGACCTCAAAATGGCGTCTGCAAATTCAGAAACTTT AGCGTCGGCAACGCACGAGCTGAAAATTATGGACGTAGAGGGTGGTGCTC TGGTGGATCCGGATCACATCGAGGAAGTGGAGACCTCCATGGTCATCGTG GTGGATGATGACGATGGGGATGTGGCCATGGTGGTGGAGGAGGACAAGCA CCCGATGCGGGATGACCCGTGTATTGAGGACATCATGGATGACGAACATG CTCCATTGGTGGCCGAGCTACAGTCCGCTCTAAATAACCCAGACGACAAA CAGGCCAGCGAGGATCCCCTCCTGGAAGACCAGGAACGTGAACCCGATGC CATGTCCACTAAAACTGAACCCTCCAGCGATGCGGAGAGCTCCCATTCGT ACCACGATCCCATGGGCCTGCTGGAGAGGATTGAAATCCATGATCCGGGA GACAGCCAGGATGACGACGACGAGGATGACGAAAGCAGCAATGGCGGTGG CGTTGACGGAGGCATGCGCCGCAAGATGCCCCGCGCACAGCGCTGGCTCC TCTGGATGAAGCGTTGGCCCTGGATCCTACACGAGGACTCCGATGGCACC TTAGCGTTCTGCCTTTACTGCAACATATCCATTAACGTGAACAACCGCTC TAGACACATCCAACAGCACAACGTGTCGCTCTCCCACCAGGAACGCGAGT GCAACTATCTGGCATTCAAGAAAAGTGAGGAGGAAACTCGAGGAGCCGAC AACGAAATCAAGCACGAATTCGGCACCAAGAGCTATGTGGCCGCCATGAA GCAAAAACGAATCTCCGAGACCGAGGCATTTAACAACTTCAACTGGCTGC GTTGGCTCCGTTGGCATCCTTGGCTTGAACGTTCCATGCCCACAGGGACC ATCGGGACATGTCGCATCTGCAGCGTGCGAATGAACGTGGAGTTTGTCTA TTTGCGCAAGCGCCACGAAACCACCAAAGGTCACATGGAGGCACTGCGCA ACCTAGATTCCGATAAGCGGAGTCGGAAGCGAAAGAGGAGCAAGAGCAAC AGCGTGACCAATAGCGGCGGGGATGAGGCCGAGCGAGAGAAGGAATCTGA ACCAGAAGTTGGGCCGGAGGATGCTCAGGACACCCCTGTGGTTATGATGA ACGGCGATGTGGACTCAGGCGACGACCCTGGCAAGTGGTGTGCACTGATT CCGGACACCAATCCACAGCAATGCCGATGTACGCTCTGCAACTGCACAAT GGCGATTACCAGCTTCCTACGGCACTGTAAAACCAGAGCTCATTGTCACA TGCTATCGACACCCGCTGAAAAGGGCTCTTCAGATATTCGCGGCATTTGG GCCGTGTTCGCCGACATGCATCCTTGGTTGATTGCTGATCCCGAAGACCC CAGCATTGGGTACTGCAGCGTCTGTCGCAAGCGATTCATGTATGGAAACT CAGAGATCAAGCGCAAGAATCACGAAAAATCCGAGAAGCATACCTTGGCT TTGGCCAGCGCCAAGGCAGGCATCGAAGTTGGTTCGGCTGACGGCAGAGG CGGCGATAACATGGATGAAGAGGAAGCGGCGGCAAGTGATCAAGCCCAGT CATCGCAGACCGATGACAGCGAAGATAATGACGATGACAATTGGTCCGAG ATCCAAAAACTCGGAAAAGGTTTTGCTCATAAGTCCTCTAGCGAGCCAAG AAAGGCCACGGTTCGCGCTGGGGTACGTTTTTACCCGTGGCTTTGCTACT CCAAGGACCGAAAGACTCAGATTTGCAAATTCTGCCGCGTGCGCTTTCAC AACGAAGCGGCAAAGGCGCGGCATGAGTTGAGTGCCCGGCATGTAAAGCT GGTAAAGCAGTTCAAAATGCGGCAAGCGAAACTGCACCAGGGCACAAACA CGCAAACTAAACATAATGCGCAGGATGATGAAGAATCACAGGAACAGGAC GAGGAATATGGAGAAGAAGAGGAGGACGCAGAAGAAGATTCCCAAAGCAA CTTCGACTTGGGCACCGTGCAGGCAAGAAAGACTGCTCGAGCGGACAATA AGCTTTTTGTCAAGCCCATTCCGGCAACCATGAAGGGCAAGGTTATGGTG TGGAAGGGCCGCTTCCCGTGGCTCTCCTACAAAAAGAACGAGCAGCGTGG AAACTATGCTTGGTGCAAGCTGTGCGAAGTGTCTCTCTACCTGCCCTCAT CCAAGTGGGCCTCCAAGCACCAGAGGACTTCCCGACACATACGCCTCCGC ATTGATCGAAAGCGCAATGGTGGCAACCCTTTGAAAACATCGAACAAAAA CTCAGGTGAAATATCCACTGTTGTGGCCACAGCTTCGGCTTTGGCCAGCG CCGAGGCTAGACAGAAAGCGGCTATGGCAGAGCTGCAAGCGAAGTACGAC TGGCTGGATCCTGATGCCAATGACGAGAATCACTGTCACTGCCGTGTTTG TGATAGCCGGCTGCCGATCAAGGTATTTTACCTGCGGCAACACGACGCTT CGCGTAAGCACGTCGAAAATAAGGAGCGGCAAAGGGCCAATGCCGCCGCT GCCGCCAATGCACCATCAGTTAGTCCCACTTCCACCGTTGATGCGGAAAG GCAGGAGTCTGGAATGGACAAGGAGAGCGAAAACGATATGAGCGTTCGAT CCGATGGCAGCACAGCGGAACCGCTGGCGAAGCGGTCCCGACGCTCAATG GAGGTTCGTCGCATAATACGCGCCCTTCGCGACTCAATGGGCAAGCGACA GGAAGAACGCTCCCAAATGGACATGGCCAGGGACATGATATGCTCGTCGT TTGATATTGTTACACGCTTGCGAACTTTGGAACGGGAGTCGGTCGCACAT AACGAGTCTATGGCCCAGGCGCCGCCATCGGTGACAGTGTCACCGATTAA GCCACCGGAGCCACGACATGTAATGGATCTCTTCTTTGACAGCATTTCGC CGACCATGAAGTCCCTGCCGCCGGATTTAGCCGCAGAGGGCAAGTCGAAA ATCATGCAGCTCGTTTGTAGCTTGGAGCTTCGAGCCATGCAGAGAAATGC GACAACTCCAACCCCAGCTACAGTTTCTGCTTCCTCGAAATGGCCTTCTT CAACTACGGTGACCCCAGTTAAAACTCCTCCTGCTCCTATTTCAGCTCCC CTTGCTTCTGTCGATGCAGATTTGCATTCCTCGGTTGTCACAACACCGCA TGAATACAATAATGGGCAGAACAATAATAACGACAAGGAAACCGTACCGA AAGAGCCAGTTACCGGGGCTTCCTCTGCCCAAGTGACCATCAATGGGAGC GCCAAAGACCTGCCAGAGAATATACGCCGTATCTTAACTTCCAACCAAAC GCAAGTGACCAACCGCCTCGAGACGGATTCCGTGCGTTGTGTACCTCTTG ACAAACTAACAACACAGAGTCGGACCAACGTGAACGGACGACTCAGTCAA GGTGGCACTTCGGAAGCACCATCCACCCCACAGGCGGACCTTAGCAATGG TAACACGTTGGCCATGATCAGGCAGATACGGGTTAACAATAACAACAGTT CCAAGATCACCGTTACTAATACGCCTCAGATGCAACAGCCGCAGCAGGCA CAGGCAAGCATAACGTCCTCGACTCCAATAATGCGTGGTGGTCCCAGCAG CAACGGTTGTCAAATCACAACATTTCGGACAATGGTGAACCATAACCGCA GGCCATAGAGCTCCTAGGAAATATGAATCAAACGTAACTTAAGACTTTAT CACTGTCATTATTTAAATTCGACTCAATCAGATATACTTTACGTTAATGA TGAATACTTGCAAGCAATTGTTCAAAATTTAGAATACACAAACGATGGAG CTTCTTCCAAGATATCACATAGAACACTACTCCTTCAACGAACTACGAAC CTGTTGCTTCCGAAACTTGCATGTTTTGAAGACGATTTGTTTCGAAACCA TTCCAATACCCGAAAAATTTTTATTTTTCATGGAGAAAATTACAAACTAT GGACTTATTCAAGTCCAAAATATAGTAAAAAAAAAAAAAAAAAAAACAGA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 9092975..9094356 | 2848..4229 | 6865 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 9091930..9092908 | 1870..2848 | 4895 | 100 | Plus |
chr3R | 27901430 | chr3R | 9089498..9090443 | 1..946 | 4715 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 9090884..9091462 | 947..1525 | 2880 | 99.8 | Plus |
chr3R | 27901430 | chr3R | 9091530..9091875 | 1525..1870 | 1730 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 13267832..13269213 | 2848..4229 | 6910 | 100 | Plus |
3R | 32079331 | 3R | 13266787..13267765 | 1870..2848 | 4895 | 100 | Plus |
3R | 32079331 | 3R | 13264355..13265300 | 1..946 | 4730 | 100 | Plus |
3R | 32079331 | 3R | 13265741..13266319 | 947..1525 | 2895 | 100 | Plus |
3R | 32079331 | 3R | 13266387..13266732 | 1525..1870 | 1730 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 9089498..9090443 | 1..946 | 99 | -> | Plus |
chr3R | 9090884..9091462 | 947..1525 | 99 | -> | Plus |
chr3R | 9091531..9091875 | 1526..1870 | 100 | -> | Plus |
chr3R | 9091931..9092181 | 1871..2121 | 100 | == | Plus |
chr3R | 9092249..9092908 | 2189..2848 | 100 | -> | Plus |
chr3R | 9092976..9094353 | 2849..4226 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-7-RB | 1..3747 | 162..3908 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-7-RB | 1..3747 | 162..3908 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-7-RB | 1..3747 | 162..3908 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-7-RB | 1..4226 | 1..4226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-7-RB | 1..4217 | 10..4226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Su(var)3-7-RB | 1..4217 | 10..4226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13264355..13265300 | 1..946 | 100 | -> | Plus |
3R | 13265741..13266319 | 947..1525 | 100 | -> | Plus |
3R | 13266388..13266732 | 1526..1870 | 100 | -> | Plus |
3R | 13266788..13267765 | 1871..2848 | 100 | -> | Plus |
3R | 13267833..13269210 | 2849..4226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13264355..13265300 | 1..946 | 100 | -> | Plus |
3R | 13265741..13266319 | 947..1525 | 100 | -> | Plus |
3R | 13266388..13266732 | 1526..1870 | 100 | -> | Plus |
3R | 13266788..13267765 | 1871..2848 | 100 | -> | Plus |
3R | 13267833..13269210 | 2849..4226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 13264355..13265300 | 1..946 | 100 | -> | Plus |
3R | 13265741..13266319 | 947..1525 | 100 | -> | Plus |
3R | 13266388..13266732 | 1526..1870 | 100 | -> | Plus |
3R | 13266788..13267765 | 1871..2848 | 100 | -> | Plus |
3R | 13267833..13269210 | 2849..4226 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 9090077..9091022 | 1..946 | 100 | -> | Plus |
arm_3R | 9091463..9092041 | 947..1525 | 100 | -> | Plus |
arm_3R | 9092110..9092454 | 1526..1870 | 100 | -> | Plus |
arm_3R | 9092510..9093487 | 1871..2848 | 100 | -> | Plus |
arm_3R | 9093555..9094932 | 2849..4226 | 100 | Plus |
Translation from 161 to 3907
> FI20162.hyp MDRDSSMQAKNLDAQCNPDLKMASANSETLASATHELKIMDVEGGALVDP DHIEEVETSMVIVVDDDDGDVAMVVEEDKHPMRDDPCIEDIMDDEHAPLV AELQSALNNPDDKQASEDPLLEDQEREPDAMSTKTEPSSDAESSHSYHDP MGLLERIEIHDPGDSQDDDDEDDESSNGGGVDGGMRRKMPRAQRWLLWMK RWPWILHEDSDGTLAFCLYCNISINVNNRSRHIQQHNVSLSHQERECNYL AFKKSEEETRGADNEIKHEFGTKSYVAAMKQKRISETEAFNNFNWLRWLR WHPWLERSMPTGTIGTCRICSVRMNVEFVYLRKRHETTKGHMEALRNLDS DKRSRKRKRSKSNSVTNSGGDEAEREKESEPEVGPEDAQDTPVVMMNGDV DSGDDPGKWCALIPDTNPQQCRCTLCNCTMAITSFLRHCKTRAHCHMLST PAEKGSSDIRGIWAVFADMHPWLIADPEDPSIGYCSVCRKRFMYGNSEIK RKNHEKSEKHTLALASAKAGIEVGSADGRGGDNMDEEEAAASDQAQSSQT DDSEDNDDDNWSEIQKLGKGFAHKSSSEPRKATVRAGVRFYPWLCYSKDR KTQICKFCRVRFHNEAAKARHELSARHVKLVKQFKMRQAKLHQGTNTQTK HNAQDDEESQEQDEEYGEEEEDAEEDSQSNFDLGTVQARKTARADNKLFV KPIPATMKGKVMVWKGRFPWLSYKKNEQRGNYAWCKLCEVSLYLPSSKWA SKHQRTSRHIRLRIDRKRNGGNPLKTSNKNSGEISTVVATASALASAEAR QKAAMAELQAKYDWLDPDANDENHCHCRVCDSRLPIKVFYLRQHDASRKH VENKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGS TAEPLAKRSRRSMEVRRIIRALRDSMGKRQEERSQMDMARDMICSSFDIV TRLRTLERESVAHNESMAQAPPSVTVSPIKPPEPRHVMDLFFDSISPTMK SLPPDLAAEGKSKIMQLVCSLELRAMQRNATTPTPATVSASSKWPSSTTV TPVKTPPAPISAPLASVDADLHSSVVTTPHEYNNGQNNNNDKETVPKEPV TGASSAQVTINGSAKDLPENIRRILTSNQTQVTNRLETDSVRCVPLDKLT TQSRTNVNGRLSQGGTSEAPSTPQADLSNGNTLAMIRQIRVNNNNSSKIT VTNTPQMQQPQQAQASITSSTPIMRGGPSSNGCQITTFRTMVNHNRRP*
Translation from 161 to 3907
> FI20162.pep MDRDSSMQAKNLDAQCNPDLKMASANSETLASATHELKIMDVEGGALVDP DHIEEVETSMVIVVDDDDGDVAMVVEEDKHPMRDDPCIEDIMDDEHAPLV AELQSALNNPDDKQASEDPLLEDQEREPDAMSTKTEPSSDAESSHSYHDP MGLLERIEIHDPGDSQDDDDEDDESSNGGGVDGGMRRKMPRAQRWLLWMK RWPWILHEDSDGTLAFCLYCNISINVNNRSRHIQQHNVSLSHQERECNYL AFKKSEEETRGADNEIKHEFGTKSYVAAMKQKRISETEAFNNFNWLRWLR WHPWLERSMPTGTIGTCRICSVRMNVEFVYLRKRHETTKGHMEALRNLDS DKRSRKRKRSKSNSVTNSGGDEAEREKESEPEVGPEDAQDTPVVMMNGDV DSGDDPGKWCALIPDTNPQQCRCTLCNCTMAITSFLRHCKTRAHCHMLST PAEKGSSDIRGIWAVFADMHPWLIADPEDPSIGYCSVCRKRFMYGNSEIK RKNHEKSEKHTLALASAKAGIEVGSADGRGGDNMDEEEAAASDQAQSSQT DDSEDNDDDNWSEIQKLGKGFAHKSSSEPRKATVRAGVRFYPWLCYSKDR KTQICKFCRVRFHNEAAKARHELSARHVKLVKQFKMRQAKLHQGTNTQTK HNAQDDEESQEQDEEYGEEEEDAEEDSQSNFDLGTVQARKTARADNKLFV KPIPATMKGKVMVWKGRFPWLSYKKNEQRGNYAWCKLCEVSLYLPSSKWA SKHQRTSRHIRLRIDRKRNGGNPLKTSNKNSGEISTVVATASALASAEAR QKAAMAELQAKYDWLDPDANDENHCHCRVCDSRLPIKVFYLRQHDASRKH VENKERQRANAAAAANAPSVSPTSTVDAERQESGMDKESENDMSVRSDGS TAEPLAKRSRRSMEVRRIIRALRDSMGKRQEERSQMDMARDMICSSFDIV TRLRTLERESVAHNESMAQAPPSVTVSPIKPPEPRHVMDLFFDSISPTMK SLPPDLAAEGKSKIMQLVCSLELRAMQRNATTPTPATVSASSKWPSSTTV TPVKTPPAPISAPLASVDADLHSSVVTTPHEYNNGQNNNNDKETVPKEPV TGASSAQVTINGSAKDLPENIRRILTSNQTQVTNRLETDSVRCVPLDKLT TQSRTNVNGRLSQGGTSEAPSTPQADLSNGNTLAMIRQIRVNNNNSSKIT VTNTPQMQQPQQAQASITSSTPIMRGGPSSNGCQITTFRTMVNHNRRP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17587-PA | 1234 | GF17587-PA | 7..1234 | 8..1248 | 3416 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19522-PA | 1253 | GG19522-PA | 1..1253 | 1..1248 | 5119 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18425-PA | 1270 | GH18425-PA | 10..1109 | 35..1156 | 2277 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Su(var)3-7-PB | 1248 | CG8599-PB | 1..1248 | 1..1248 | 6582 | 100 | Plus |
Su(var)3-7-PA | 1250 | CG8599-PA | 1..1250 | 1..1248 | 6569 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24326-PA | 1219 | GI24326-PA | 82..1180 | 122..1222 | 2483 | 47.9 | Plus |
Dmoj\GI24218-PA | 376 | GI24218-PA | 291..346 | 983..1038 | 158 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24399-PA | 1195 | GL24399-PA | 20..1174 | 21..1228 | 2712 | 51.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26601-PA | 1191 | GA26601-PA | 20..1170 | 21..1228 | 2707 | 51.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24093-PA | 1243 | GM24093-PA | 1..1243 | 1..1248 | 5412 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18892-PA | 1215 | GD18892-PA | 1..1215 | 1..1248 | 5389 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Su(var)3-7-PA | 1281 | GJ10411-PA | 24..1204 | 21..1199 | 2392 | 45.5 | Plus |
Dvir\GJ10788-PA | 401 | GJ10788-PA | 310..368 | 982..1039 | 158 | 55.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22413-PA | 1176 | GK22413-PA | 1..1151 | 30..1232 | 2381 | 44.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26256-PA | 1246 | GE26256-PA | 1..1246 | 1..1248 | 5000 | 80.4 | Plus |