Clone FI20169 Report

Search the DGRC for FI20169

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:69
Vector:pFlc-1
Associated Gene/TranscriptCG10338-RA
Protein status:FI20169.pep: gold
Sequenced Size:2366

Clone Sequence Records

FI20169.complete Sequence

2366 bp assembled on 2012-04-17

GenBank Submission: BT133447.1

> FI20169.complete
CACTGCACAGCTGACTGATAACACAATCGGAAGGGGAGAACTTCATTTTG
GGGTATATTTATTTTGGGCCACAATTAGTTGCTAGCATTTGATTGAAGTA
GCTCCAGCTCCATTGGCTTGTTTGTAAAATGCCCTAGAGTTCGCTTTCCA
ACGCCGCGTTCATTGATTCGTTCGAGTTCAGTTGCGCTAGTCGCTAGTTC
GATGGCTTTACGCGGAATCCCCGCCTGAGATAGACAGCCAATCTAACTAA
CTAAGAAGCGCTGGTTGTGGGTGCTAGTGGAGCCAGGTGGGTGGTGCTTT
ACTGCTGGAGTCTCTGAAAGCCAGACAACCCAGCCAGTCCCGGATAGGCC
ATAAGTCATAATTTCCAGACGGCGCACAGCTACCAAAGAGCCAGGCACGC
ACAGCAAAGATGAAAATCCATTTTCGGGAACAGTACGGAAGAAAGGGGGA
GGAAATCCTCTATGTGACGCCAGCAGATCAGAGCAACATTGTGCGTGTGC
CGCTGCGTGGGGATAAGCTGGTCATCCAGGAGAAGTTCCTGCTGTTTCGC
GTGCTGCAGAAGGTCTTCCTGCCCAAGGGCTATCCGGATAGTGTCAGCGA
GGACTATGCAGCATACCAGATCTGGGACACGGCCCAGGCCTTCTGCAGCA
CCATCTGCGGCACCCTGTGCACACACGCCATCTTGAAGGGCATCGGCGTG
GGCAGCGAAAACATCAATGCCTTTTCCGCAACGGCGACTTGGATCTTGAA
GGAGGGCAGTGGTCACGTGGGTCGCATTGTGTTCGCATGGTGGCAGGGCT
CCCAATTGGATGTGGACTCAAAGAAATGGCGCCTGCGTGCGGATTTTCTG
AACGATCTGGCCATGGGCATCGAGATCTACGTGCTTCCCAAGTATCCGCA
TTTCAGCACCCAAATCCTGTGCTGCTCGACCCTGCTGAAGGCGATTGTGG
GCGTTGCCGGAGGTGCCACTAGATCGGCATTGACCCAGCATCATGCCTTG
AGGGGCAACCTGGCCGATGTGGCATCCAAGGACAGTTCACAGGAGACGTG
CGTGAATCTGGTGGCCTCCTTTGTGGGCCTGTATCTCCTCTCGCTGATCA
AGAGTCAGGCGGTCCTGTATACCATATTCTACGTGGTGGTCAGCCTGCAT
CTGTATGCCAATCTGAAAGCAGTACGCGCAGTATGCTTGCGAAGCTTCAA
CGAGTCGCGCTATTTGATCGCCCTGGAGGAGTTTTTCAGGTCGTCAAGGA
TGCTCAGTCCGCAGCAGGTGAACGCCATGGAGCGTGTGACGGTTGGCCAA
ACGGTTTCAGTGTCACTGAACATAAAGCTCGGACTGAGCGTTAAAAATTT
GATTGACGAGTACAAGAGCAGCAGCGTTATTGAGAACATAGTGTCCTCCT
TCGATCCCCACGAGCACTTCATCATCGCACAGACCAAAAAGTGTCTGGGT
GTATATCTGCACTTTGAAACTCGTCCGCAGGATGTGCTGAAGGCGTACTT
CTTTGCAGTGTCCTATTTGCAGGACAGGAATCAGCTTAAGGAGAAATACT
GGGACATTCAGACGAAGTGGCAGGAGTTTTTGGCGCTGGCGCAGCAAGAG
GGTTGGCTAATCCATCATCACTTGCTGCTGGTGGACGAATACCGTTTAGA
TTGGAAGGTGTAGGAGAATGGTGACTTTGATTGCTAGATTTTGACCTTAG
TTGCTTGCTTTGACCTGAAGAATTAATTTCATTAGACTTCATTATCATTC
TCACATATCTCACATGGCTACCATAGAGCGAAAACATTGATATTAACTAA
GTGCTATTGATATTTACCTAGATTTAGCTTTGTGAATCTCGTTCGCACTT
GAACATCTTCCAACTAACTCTGCCTTAGCACAAAGTAATGTTTGTAACCG
ATATTTGATAAGCTAATTTCGCCCTGCTTTTACCCATGAATTTATCGGAA
GACATTGTTTCAATTATTAGCTGCTACTAGGACTAAAGGAGACACAAAAG
AAAATCAAGAAACTATTTTGTAAGGACTTATTGTAAGTATGCACTTCGAT
ATTTCGAGAGCATACAATACATTTTTAGATATTAGTCATGAAGAATCTCA
CAACGAACTACGGAAAACCCGTTTCAATTGCATTCTGAGCAAAAAGTGTA
CAAAGTTTTAAGCTTTTTTTAATGCTAAATGTGCAATAGTAAGTTAAATA
TTAGCTTCGAGTATATACGGAATAAGTTGGCGTCCATTTTTGCTTAACTA
AAATGCTTTTCAATGAATGCAATATATGAATTGTGTGCATACCGTCTCAC
CACGCAAATGATTTTAACGAAACAAATAAAAGTAAACAATTTTAAGGACA
AAAAAAAAAAAAAAAA

FI20169.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:47:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 18695309..18696104 474..1269 3965 99.9 Plus
chr2L 23010047 chr2L 18696567..18697315 1601..2349 3745 100 Plus
chr2L 23010047 chr2L 18694477..18694952 1..476 2380 100 Plus
chr2L 23010047 chr2L 18696163..18696500 1266..1603 1690 100 Plus
chr4 1351717 chr4 540799..540920 1954..2075 355 86.1 Plus
chr4 1351717 chr4 541207..541323 2074..2190 345 89.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:47:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18696565..18697360 474..1269 3965 99.9 Plus
2L 23513712 2L 18697823..18698576 1601..2354 3770 100 Plus
2L 23513712 2L 18695733..18696208 1..476 2380 100 Plus
2L 23513712 2L 18697419..18697756 1266..1603 1690 100 Plus
4 1348131 4 520248..520369 1954..2075 355 86.1 Plus
4 1348131 4 520656..520774 2074..2190 325 88.4 Plus
Blast to na_te.dros performed 2019-03-15 13:47:46
Subject Length Description Subject Range Query Range Score Percent Strand
mdg3 5519 mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). 1870..1934 1794..1732 121 69.2 Minus

FI20169.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:48:52 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 18694477..18694952 1..476 100 -> Plus
chr2L 18695312..18696102 477..1267 99 -> Plus
chr2L 18696165..18696498 1268..1601 100 -> Plus
chr2L 18696568..18697315 1602..2349 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-17 17:25:41 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
CG10338-RA 1..1254 410..1663 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:12:29 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
CG10338-RA 1..1254 410..1663 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:40:59 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
CG10338-RA 1..1254 410..1663 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-17 17:25:41 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
CG10338-RA 1..2349 1..2349 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:12:29 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
CG10338-RA 3..2351 1..2349 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:40:59 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
CG10338-RA 3..2351 1..2349 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:52 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18695733..18696208 1..476 100 -> Plus
2L 18696568..18697358 477..1267 99 -> Plus
2L 18697421..18697754 1268..1601 100 -> Plus
2L 18697824..18698571 1602..2349 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:52 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18695733..18696208 1..476 100 -> Plus
2L 18696568..18697358 477..1267 99 -> Plus
2L 18697421..18697754 1268..1601 100 -> Plus
2L 18697824..18698571 1602..2349 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:48:52 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18695733..18696208 1..476 100 -> Plus
2L 18696568..18697358 477..1267 99 -> Plus
2L 18697421..18697754 1268..1601 100 -> Plus
2L 18697824..18698571 1602..2349 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:12:29 Download gff for FI20169.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18695733..18696208 1..476 100 -> Plus
arm_2L 18696568..18697358 477..1267 99 -> Plus
arm_2L 18697421..18697754 1268..1601 100 -> Plus
arm_2L 18697824..18698571 1602..2349 100   Plus

FI20169.hyp Sequence

Translation from 409 to 1662

> FI20169.hyp
MKIHFREQYGRKGEEILYVTPADQSNIVRVPLRGDKLVIQEKFLLFRVLQ
KVFLPKGYPDSVSEDYAAYQIWDTAQAFCSTICGTLCTHAILKGIGVGSE
NINAFSATATWILKEGSGHVGRIVFAWWQGSQLDVDSKKWRLRADFLNDL
AMGIEIYVLPKYPHFSTQILCCSTLLKAIVGVAGGATRSALTQHHALRGN
LADVASKDSSQETCVNLVASFVGLYLLSLIKSQAVLYTIFYVVVSLHLYA
NLKAVRAVCLRSFNESRYLIALEEFFRSSRMLSPQQVNAMERVTVGQTVS
VSLNIKLGLSVKNLIDEYKSSSVIENIVSSFDPHEHFIIAQTKKCLGVYL
HFETRPQDVLKAYFFAVSYLQDRNQLKEKYWDIQTKWQEFLALAQQEGWL
IHHHLLLVDEYRLDWKV*

FI20169.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:29:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG10338-PB 417 CG10338-PB 1..417 1..417 2160 100 Plus
CG10338-PA 417 CG10338-PA 1..417 1..417 2160 100 Plus

FI20169.pep Sequence

Translation from 409 to 1662

> FI20169.pep
MKIHFREQYGRKGEEILYVTPADQSNIVRVPLRGDKLVIQEKFLLFRVLQ
KVFLPKGYPDSVSEDYAAYQIWDTAQAFCSTICGTLCTHAILKGIGVGSE
NINAFSATATWILKEGSGHVGRIVFAWWQGSQLDVDSKKWRLRADFLNDL
AMGIEIYVLPKYPHFSTQILCCSTLLKAIVGVAGGATRSALTQHHALRGN
LADVASKDSSQETCVNLVASFVGLYLLSLIKSQAVLYTIFYVVVSLHLYA
NLKAVRAVCLRSFNESRYLIALEEFFRSSRMLSPQQVNAMERVTVGQTVS
VSLNIKLGLSVKNLIDEYKSSSVIENIVSSFDPHEHFIIAQTKKCLGVYL
HFETRPQDVLKAYFFAVSYLQDRNQLKEKYWDIQTKWQEFLALAQQEGWL
IHHHLLLVDEYRLDWKV*

FI20169.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:35:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15067-PA 417 GF15067-PA 1..417 1..417 2108 92.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21126-PA 417 GG21126-PA 1..417 1..417 2204 98.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11606-PA 417 GH11606-PA 1..416 1..416 2065 91.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG10338-PB 417 CG10338-PB 1..417 1..417 2160 100 Plus
CG10338-PA 417 CG10338-PA 1..417 1..417 2160 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17175-PA 417 GI17175-PA 1..416 1..416 2026 88.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19630-PA 417 GL19630-PA 1..417 1..417 2074 90.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:35:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10253-PA 417 GA10253-PA 1..417 1..417 2074 90.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:35:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17287-PA 417 GM17287-PA 1..417 1..417 2213 99.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24150-PA 417 GD24150-PA 1..417 1..417 2219 99.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17681-PA 417 GJ17681-PA 1..416 1..416 2047 89.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:35:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24688-PA 417 GK24688-PA 1..417 1..417 2012 88.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:35:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13200-PA 417 GE13200-PA 1..417 1..417 2213 99 Plus