Clone FI20175 Report

Search the DGRC for FI20175

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:75
Vector:pFlc-1
Associated Gene/TranscriptCG11426-RA
Protein status:FI20175.pep: gold
Sequenced Size:1896

Clone Sequence Records

FI20175.complete Sequence

1896 bp assembled on 2012-04-17

GenBank Submission: BT133446.1

> FI20175.complete
AGATTTGTTTACAAAGTCTGGTTTCATTCAGTCGCAATCGAGAAGCGGCG
CCTAGATGTTTGCGGATCGGGTTCGAACGGGTTTCAAAAGTCGGTTGTCA
GCGTCGTAAAACAATTAGATTGCCGTTAAGGTGAACAATTATTTAATGAT
ACGGCGCAGAGCGTCGTAGTGGCAATAAAAACAGAAACGTGATGACATAT
AATCAATATGCCATCGTAAAGGATCCATTACAATTAGTGTTTCTGGCTCT
TGTCTAATCTGGAAAAATGAAGAGCCGCAACAATAATTACATCCCCGCAA
ACGGCTAACTACCATAAAATAGGCCATAAACACTCTGCTCTGACTCAGAG
AATTTAAAAATAAGAGAGCACTGGGGAGCCAAAAACAATGCCGAATGTCG
GGAGAGTGCCGCCTATTAAATGAGCGTTAAATTAAAGAACGTTACCCAAA
CGACGCCAACTCAGTCAGCCACTGACAACGAACCCGACGAAACGATCGAC
GCGGCGGGAAAACAAGCAAACGAATCGAAAAGCTAATTACCAGCAGGCAG
AAAGGCCATTTGGAATATTAACTAATTAAGCCAGTGAAATGCGCGACGCA
CCAGAAGATCAGTCCGTAACGGTTTCCATGCCGGCATCTGCATCCGGCTC
TGCCGCCGGCTCCACGGGACCGTCATCGGATCGCCGGATGACGCAGCGCC
TGCTCGTGGAGCTCCTGGTGGTGGTGGTGCTCGTCATTCCCATCTGCGTG
TACGAGTTCGCGGTGGATCCCGTGCGACGCGGCTTTTTCTGCGACGACGA
GAGCATCAGCTATCCATTCCAGGACAACACCATAACGCCGGTAATGCTCG
GCCTGATCGTGGGCCTGCTTCCGGCCCTGGTCATGGTGGTGGTGGAGTAC
GTTAGCCACCTGCGCGCCGGAGACATCTCGGCCACGGTGGATCTGCTTGG
CTGGAGGGTATCCACATGGTACGTGGAGCTGGGCCGGCAGTCCACCTACT
TCTGCTTTGGCCTGCTGCTCACCTTTGACGCTACCGAGGTGGGCAAGTAC
ACCATCGGACGCCTGAGACCGCACTTCCTGGCCGTTTGCCAGCCGCAGAT
TGCGGATGGGAGCATGTGCTCCGATCCGGTCAACCTGCACCGCTACATGG
AGAACTACGACTGCGCCGGCGAGGGCTTCACCGTGGAGGACGTGCGACAG
GCCCGCCTCAGCTTTCCCAGCGGTCACTCTAGTTTGGCCTTCTATGCCAT
GATCTACGTGGCACTCTACCTCCAGCGGAAGATCACCTGGCGGGGATCGA
AGCTGAGCCGGCACTTTGTGCAGTTCGCAGTGGTGATGGTAGCCTGGTAT
ACGGCCCTCAGCCGTGTAATGGACCATTGGCACCACTGGTCCGACGTCCT
TTCCGGATCGCTACTTGGCGTGGCTGGCGCTCTAATCACCGCCCACTATA
TAGCAAGGATGTTCGACGACGGGGCAAGCAATATTCTAAGCGGTGGCCTG
AGGAGGGAAAACACAGCGGCCACTCTGCAGGAAGAGGTCTGCCCCACCAC
TCCCCCGCCGTACTCCGTGAACAACAGCTTCAGCGAGGATCAGTACTGCT
CTAAGGTTTAGTGAGACGGATAAGATGCTTTCGTAGCGATGTCAATTCAA
AACATTCCAAAGGTAGCAATAAAGATTAGATAAACTATCAGCACTAATTG
AATCTGTAGTACTTGTAGAGCATTAAGTTAGAGATCCCCCATCTGTATGT
ATGGCTCATGTGAGTCTGTTCCTGCAATCTCATCTAAGTATAAGTCATAG
TATTATTAATTTTATGTATTTTAATTGGTACCACTAAAATAAATACGCAT
TACGAATGAATCGCACTGCGTTGTTTGAGCAAAAAAAAAAAAAAAA

FI20175.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:44:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 22460773..22462417 236..1880 8225 100 Plus
chr3L 24539361 chr3L 22459466..22459702 1..237 1185 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:44:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22471865..22473510 236..1881 8230 100 Plus
3L 28110227 3L 22470558..22470794 1..237 1185 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:44:43 has no hits.

FI20175.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:45:35 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 22459466..22459702 1..237 100 -> Plus
chr3L 22460775..22462417 238..1880 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-17 17:25:31 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 1..1023 589..1611 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:11:34 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 1..1023 589..1611 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:40:14 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 1..1023 589..1611 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-17 17:25:31 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 1..1880 1..1880 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:11:34 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 3..1882 1..1880 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:40:14 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
CG11426-RA 3..1882 1..1880 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:35 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22470558..22470794 1..237 100 -> Plus
3L 22471867..22473509 238..1880 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:35 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22470558..22470794 1..237 100 -> Plus
3L 22471867..22473509 238..1880 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:45:35 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22470558..22470794 1..237 100 -> Plus
3L 22471867..22473509 238..1880 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:11:34 Download gff for FI20175.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22463658..22463894 1..237 100 -> Plus
arm_3L 22464967..22466609 238..1880 100   Plus

FI20175.hyp Sequence

Translation from 588 to 1610

> FI20175.hyp
MRDAPEDQSVTVSMPASASGSAAGSTGPSSDRRMTQRLLVELLVVVVLVI
PICVYEFAVDPVRRGFFCDDESISYPFQDNTITPVMLGLIVGLLPALVMV
VVEYVSHLRAGDISATVDLLGWRVSTWYVELGRQSTYFCFGLLLTFDATE
VGKYTIGRLRPHFLAVCQPQIADGSMCSDPVNLHRYMENYDCAGEGFTVE
DVRQARLSFPSGHSSLAFYAMIYVALYLQRKITWRGSKLSRHFVQFAVVM
VAWYTALSRVMDHWHHWSDVLSGSLLGVAGALITAHYIARMFDDGASNIL
SGGLRRENTAATLQEEVCPTTPPPYSVNNSFSEDQYCSKV*

FI20175.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG11426-PA 340 CG11426-PA 1..340 1..340 1779 100 Plus
wun-PA 300 CG8804-PA 3..271 30..292 651 43.9 Plus
wun-PB 379 CG8804-PB 82..350 30..292 651 43.9 Plus
wun-PC 364 CG8804-PC 82..344 30..286 632 43.7 Plus
wun2-PA 350 CG8805-PA 69..344 13..283 556 39.8 Plus

FI20175.pep Sequence

Translation from 588 to 1610

> FI20175.pep
MRDAPEDQSVTVSMPASASGSAAGSTGPSSDRRMTQRLLVELLVVVVLVI
PICVYEFAVDPVRRGFFCDDESISYPFQDNTITPVMLGLIVGLLPALVMV
VVEYVSHLRAGDISATVDLLGWRVSTWYVELGRQSTYFCFGLLLTFDATE
VGKYTIGRLRPHFLAVCQPQIADGSMCSDPVNLHRYMENYDCAGEGFTVE
DVRQARLSFPSGHSSLAFYAMIYVALYLQRKITWRGSKLSRHFVQFAVVM
VAWYTALSRVMDHWHHWSDVLSGSLLGVAGALITAHYIARMFDDGASNIL
SGGLRRENTAATLQEEVCPTTPPPYSVNNSFSEDQYCSKV*

FI20175.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:34:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10980-PA 345 GF10980-PA 1..345 1..340 1334 76.8 Plus
Dana\GF13080-PA 377 GF13080-PA 56..345 1..292 661 41.3 Plus
Dana\GF11822-PA 347 GF11822-PA 57..341 9..283 539 38.9 Plus
Dana\GF10978-PA 335 GF10978-PA 31..255 59..294 509 43.5 Plus
Dana\GF23463-PA 331 GF23463-PA 1..220 59..288 455 42.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16258-PA 340 GG16258-PA 1..340 1..340 1519 90 Plus
Dere\GG10557-PA 372 GG10557-PA 61..343 2..292 672 41.1 Plus
Dere\GG23436-PA 351 GG23436-PA 73..345 16..283 534 38.8 Plus
Dere\GG16256-PA 341 GG16256-PA 9..267 37..292 526 41.5 Plus
Dere\GG13182-PA 337 GG13182-PA 5..220 63..288 473 44.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:34:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16694-PA 345 GH16694-PA 36..345 32..340 1211 68.1 Plus
Dgri\GH21309-PA 380 GH21309-PA 87..357 30..298 636 44.2 Plus
Dgri\GH16692-PA 348 GH16692-PA 31..293 59..330 529 40.8 Plus
Dgri\GH20575-PA 365 GH20575-PA 71..362 6..283 504 35.6 Plus
Dgri\GH14815-PA 385 GH14815-PA 5..225 63..292 456 43.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG11426-PA 340 CG11426-PA 1..340 1..340 1779 100 Plus
wun-PA 300 CG8804-PA 3..271 30..292 651 43.9 Plus
wun-PB 379 CG8804-PB 82..350 30..292 651 43.9 Plus
wun-PC 364 CG8804-PC 82..344 30..286 632 43.7 Plus
wun2-PA 350 CG8805-PA 69..344 13..283 556 39.8 Plus
wun2-PB 246 CG8805-PB 9..240 60..283 532 43.1 Plus
CG11438-PB 341 CG11438-PB 13..265 41..292 531 42.7 Plus
CG11438-PA 341 CG11438-PA 13..265 41..292 531 42.7 Plus
laza-PA 334 CG11440-PA 5..223 63..291 498 43.5 Plus
CG11425-PA 305 CG11425-PA 12..252 37..282 440 40.6 Plus
CG11437-PA 305 CG11437-PA 8..275 33..292 297 29.9 Plus
CG12746-PE 363 CG12746-PE 163..307 149..292 178 32.5 Plus
CG12746-PD 363 CG12746-PD 163..307 149..292 178 32.5 Plus
CG12746-PB 363 CG12746-PB 163..307 149..292 178 32.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:34:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11383-PA 345 GI11383-PA 1..345 1..340 1230 68.6 Plus
Dmoj\GI19743-PA 298 GI19743-PA 3..269 30..292 659 44 Plus
Dmoj\GI11380-PA 340 GI11380-PA 9..264 37..292 544 43 Plus
Dmoj\GI19768-PA 375 GI19768-PA 116..369 37..283 509 40.1 Plus
Dmoj\GI13921-PA 361 GI13921-PA 5..224 63..292 473 42.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23165-PA 343 GL23165-PA 1..343 1..340 1330 77.3 Plus
Dper\GL16886-PA 306 GL16886-PA 3..277 30..298 635 41.5 Plus
Dper\GL17588-PA 372 GL17588-PA 88..366 12..283 526 36.8 Plus
Dper\GL23143-PA 328 GL23143-PA 9..250 37..292 437 35.8 Plus
Dper\GL23176-PA 274 GL23176-PA 2..205 75..283 356 41.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:34:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10999-PA 343 GA10999-PA 1..343 1..340 1330 77.3 Plus
Dpse\GA21332-PA 386 GA21332-PA 83..357 30..298 640 41.5 Plus
Dpse\GA21332-PC 306 GA21332-PC 3..277 30..298 635 41.5 Plus
Dpse\GA21332-PB 365 GA21332-PB 83..353 30..294 616 41.3 Plus
Dpse\GA11005-PA 343 GA11005-PA 9..265 37..292 526 40.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22448-PA 340 GM22448-PA 1..340 1..340 1752 96.2 Plus
Dsec\GM20603-PA 372 GM20603-PA 75..344 30..293 660 43 Plus
Dsec\GM21120-PA 350 GM21120-PA 72..344 16..283 531 39.1 Plus
Dsec\GM22445-PA 341 GM22445-PA 9..265 37..292 525 41.6 Plus
Dsec\GM22093-PA 337 GM22093-PA 5..224 63..292 473 43.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15031-PA 340 GD15031-PA 1..340 1..340 1764 97.1 Plus
Dsim\GD10076-PA 372 GD10076-PA 75..344 30..293 661 43 Plus
Dsim\GD15029-PA 341 GD15029-PA 9..265 37..292 528 41.6 Plus
Dsim\GD10653-PA 350 GD10653-PA 85..344 32..283 522 39.6 Plus
Dsim\GD12067-PA 343 GD12067-PA 5..224 63..292 473 43.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:34:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11638-PA 337 GJ11638-PA 1..337 1..340 1330 68.9 Plus
Dvir\GJ18026-PA 378 GJ18026-PA 83..349 30..292 656 43.7 Plus
Dvir\GJ11635-PA 345 GJ11635-PA 31..268 59..292 539 44.5 Plus
Dvir\GJ18273-PA 332 GJ18273-PA 19..311 6..283 503 36.2 Plus
Dvir\GJ13711-PA 340 GJ13711-PA 5..220 63..288 474 43.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16761-PA 362 GK16761-PA 46..362 29..340 1266 72.6 Plus
Dwil\GK21745-PA 385 GK21745-PA 86..357 30..292 649 44.5 Plus
Dwil\GK21557-PA 361 GK21557-PA 69..355 12..283 540 39 Plus
Dwil\GK16759-PA 364 GK16759-PA 9..276 37..292 524 41 Plus
Dwil\GK17452-PA 349 GK17452-PA 5..234 63..302 463 41.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:34:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19506-PA 340 GE19506-PA 1..340 1..340 1550 92.6 Plus
Dyak\GE23019-PA 340 GE23019-PA 1..340 1..340 1545 92.4 Plus
Dyak\GE22302-PA 369 GE22302-PA 72..340 30..292 662 43.5 Plus
Dyak\GE23017-PA 341 GE23017-PA 9..265 37..292 539 41.9 Plus
Dyak\GE19275-PA 354 GE19275-PA 89..348 32..283 532 40 Plus