Clone FI20177 Report

Search the DGRC for FI20177

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:77
Vector:pFlc-1
Associated Gene/TranscriptGckIII-RA
Protein status:FI20177.pep: gold
Sequenced Size:2506

Clone Sequence Records

FI20177.complete Sequence

2506 bp assembled on 2012-04-18

GenBank Submission: BT133480.1

> FI20177.complete
TCATCGCTGTCTGGAACAGCGATGACTCGAGAGCGGAATCGGTATTCGAT
ACTGCTGCGATACAGCAAAAAAAAGAGAGATTTCTCGGATTAGATGAGAT
ACCAACGAAAAAATTATTAGTCAAGTGCCCCCGCAGAGTAGTTCAGCCAC
CAAATAGCCCGCAGAACAGTTCAGTCCAGTTGGGTCCAACACAAGCCAGT
CGAGAGCCAGCGGAGTAACAAGGAAACCCGTGAATCCAGAAGGAGGTGGA
GGAGGAGAGCCAGAAGCCACGAAGTGGGAAGTAGAAACCAGATAGGAAAC
ATGTCCTGGACGGAGAAAGTCGATCCAGAGCTCATCTTCACCAAGCAGGA
GCGCATCGGCAAGGGCTCCTTCGGCGAGGTGTTCAAGGGCATCGACAACC
GCACCCAGCAAGTGGTGGCCATCAAGATCATCGATCTGGAGGAGGCCGAA
GATGAGATCGACGACATCCAGCAGGAGATCATGGTGCTGTCGCAGTGCGA
CTCGCCGTACGTGACGAAGTACTATGGCAGCTTTCTTAAGGGCACCAAGT
TATGGATCATCATGGAGTACCTGGGCGGTGGATCCGCCTTGGACCTCATG
AAGGCCGGCTCCTTCGAGGAAATGCACATCGGGATCATATTGCGCGAAGT
GCTTAAGGGCCTGGACTACCTGCACTCGGAGCGCAAGCTGCATCGCGACA
TCAAGGCGGCCAATGTTCTGTTGAGCGAACAGGGCGATGTCAAGCTGGCG
GACTTTGGAGTCGCTGGCCAGCTGACCAACACCACATCCAAGAGGAACAC
CTTCGTGGGCACGCCCTTTTGGATGGCGCCCGAGGTGATCAAGCAGTCAC
AGTACGATGCCAAGGCGGACATCTGGTCGTTGGGCATCACGGCTATCGAA
CTGGCCAAGGGTGAGCCGCCCAATTCGGAGCTGCATCCGATGCGCGTGCT
CTTCCTCATCCCCAAGAACAATCCACCCCAGCTGACGGGCAGCTATACCA
AGTCTTTTAAGGACTTTGTGGAGGCCTGCCTAAACAAGGACCCGGAGAAC
AGGCCCACGGCCAAGGAGCTGCTCAAGTACCCGTTCATCAAGAAGGCCAA
GAAGAACGCCTATCTGATTGACCTGATCGACCGCTTCAAGAAGTGGAAGG
TCTCCAAGGGCGACGAAAGTGAGACGGAGTCTGAGAACTCTGACTCGGAC
TCGGACGCCAAGCAGGGCGGCAGCAGCCAGGATGAGCCCTGGATCATGAC
CGTCAAGGGCCTGCATATCAACAGTGCTCCGCGGGCGGGTGTCAACAGCT
TCCAGTTGCAGGAGCACGAGCTAACCATGCAGAAGCTGATGCAGACCACA
CACTCGCCAGCCGGCGGTGGTGGCGTGCAAGCGTCCCCTGCTGCAAATGC
ATTATCGTCCTCTGTGTCCGCCGTGGCGGCGTCAGCTTCCTCCGTATCGG
TCATTACAGCCAACGAAGGTGTCTCCTCTGCATCCGCCCTGCCCCCCCAG
AACAGTCACGTCCACAACCACAACCACAACAACATTAACAACAATAACAT
CAGAAACTTGAGCAACAAGCATGCCACCACCACCATGCTGAACGCAGCTC
CTCCGCCGAGCAGCGTCACAAGCTCGTCGTCGGCCAGTGAGCTGCAGCAG
AAGCGTTCCAGCTCGAAGCCGGAGCTGCGCCAGTCGCGATCCGCCGCCCC
TCTGGATCAAGTAGAGGATCGCCGTGCCTCTTTGGGCCTGCCATTGCAGT
CGTCGGTTCCGACTCCATCGACGGCTGAGCAGCAGCAACAGCGCCGCAGC
AGCCAACGTGAATCATTCCATGCAAATAACGCCGCGCTGGTTGCCAGCTG
CAGCAGCAGTAGCAACAACCACAGCCACGAGGAGCATGTGGCCACCAACC
ATGCCAGCCATGTCAAGCACTCTGGGGCGGGACAACGCCTAGTCCAAACG
AACAGCGCCTGTCTGAACAACTTCCTCTTCCCCGTGCTGAGCGACATCCA
GCGAAAGTACTCCGGCGGAGGATCTGCAGGAAGCGGAGGATCAGGCGGCC
GTAACATAGGCGTCGGCAGCGACATCGGCGACCTGAAGTCTGTGTTCGAG
CTGGCCGAACGTTCCAGTCCGGGAGTGAGCGACCTATTTATGAAAGAGCT
GATCCACATGCTCGTTCCTGGTTACTCGGAGACGCGAATCAATACGATCA
TGGACCGCGCCATACGCAACCGCAAGTAGCTGGCGAAGCCGTAGCAAATT
CCGATTCCAAGCAGCCTATTTTAATATATACACAACTTTATTAACGACAC
CGAGACAACACAAACTGAAACGCTGGAGCAGACATATTCCGACATTTAGT
GGCCAACAGAGGACCGGGAGCGATGTACATGTATTTCAATTGAACAGTTA
TTTAAGCATATAATATGTATTCGTTTGTTTATCTGCAATATTAATCTAAT
GTAAAACATATATAACTTCAAAATAAAAACCCCACAAAATTAAAAAAAAA
AAAAAA

FI20177.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:51:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12910005..12912457 37..2489 12235 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17085534..17087991 37..2494 12275 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:51:52 has no hits.

FI20177.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:52:54 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12909989..12912459 17..2491 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-18 11:58:48 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
GckIII-RA 1..1929 301..2229 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:14:26 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
GckIII-RA 1..1929 301..2229 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:42:35 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
GckIII-RA 1..1929 301..2229 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-18 11:58:48 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
GckIII-RA 1..2365 37..2401 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:14:26 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
GckIII-RA 22..2476 37..2491 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:42:35 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
GckIII-RA 22..2476 37..2491 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:52:54 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17085518..17087988 17..2491 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:52:54 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17085518..17087988 17..2491 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:52:54 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17085518..17087988 17..2491 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:14:26 Download gff for FI20177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12911240..12913710 17..2491 99   Plus

FI20177.hyp Sequence

Translation from 300 to 2228

> FI20177.hyp
MSWTEKVDPELIFTKQERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE
DEIDDIQQEIMVLSQCDSPYVTKYYGSFLKGTKLWIIMEYLGGGSALDLM
KAGSFEEMHIGIILREVLKGLDYLHSERKLHRDIKAANVLLSEQGDVKLA
DFGVAGQLTNTTSKRNTFVGTPFWMAPEVIKQSQYDAKADIWSLGITAIE
LAKGEPPNSELHPMRVLFLIPKNNPPQLTGSYTKSFKDFVEACLNKDPEN
RPTAKELLKYPFIKKAKKNAYLIDLIDRFKKWKVSKGDESETESENSDSD
SDAKQGGSSQDEPWIMTVKGLHINSAPRAGVNSFQLQEHELTMQKLMQTT
HSPAGGGGVQASPAANALSSSVSAVAASASSVSVITANEGVSSASALPPQ
NSHVHNHNHNNINNNNIRNLSNKHATTTMLNAAPPPSSVTSSSSASELQQ
KRSSSKPELRQSRSAAPLDQVEDRRASLGLPLQSSVPTPSTAEQQQQRRS
SQRESFHANNAALVASCSSSSNNHSHEEHVATNHASHVKHSGAGQRLVQT
NSACLNNFLFPVLSDIQRKYSGGGSAGSGGSGGRNIGVGSDIGDLKSVFE
LAERSSPGVSDLFMKELIHMLVPGYSETRINTIMDRAIRNRK*

FI20177.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:30:38
Subject Length Description Subject Range Query Range Score Percent Strand
GckIII-PA 642 CG5169-PA 1..642 1..642 3283 100 Plus
hpo-PB 669 CG11228-PB 38..543 9..549 740 34.3 Plus
hpo-PA 669 CG11228-PA 38..543 9..549 740 34.3 Plus
msn-PG 1101 CG16973-PG 27..589 8..542 686 33.7 Plus
msn-PC 1102 CG16973-PC 27..589 8..542 686 33.7 Plus

FI20177.pep Sequence

Translation from 300 to 2228

> FI20177.pep
MSWTEKVDPELIFTKQERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE
DEIDDIQQEIMVLSQCDSPYVTKYYGSFLKGTKLWIIMEYLGGGSALDLM
KAGSFEEMHIGIILREVLKGLDYLHSERKLHRDIKAANVLLSEQGDVKLA
DFGVAGQLTNTTSKRNTFVGTPFWMAPEVIKQSQYDAKADIWSLGITAIE
LAKGEPPNSELHPMRVLFLIPKNNPPQLTGSYTKSFKDFVEACLNKDPEN
RPTAKELLKYPFIKKAKKNAYLIDLIDRFKKWKVSKGDESETESENSDSD
SDAKQGGSSQDEPWIMTVKGLHINSAPRAGVNSFQLQEHELTMQKLMQTT
HSPAGGGGVQASPAANALSSSVSAVAASASSVSVITANEGVSSASALPPQ
NSHVHNHNHNNINNNNIRNLSNKHATTTMLNAAPPPSSVTSSSSASELQQ
KRSSSKPELRQSRSAAPLDQVEDRRASLGLPLQSSVPTPSTAEQQQQRRS
SQRESFHANNAALVASCSSSSNNHSHEEHVATNHASHVKHSGAGQRLVQT
NSACLNNFLFPVLSDIQRKYSGGGSAGSGGSGGRNIGVGSDIGDLKSVFE
LAERSSPGVSDLFMKELIHMLVPGYSETRINTIMDRAIRNRK*

FI20177.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17125-PA 403 GF17125-PA 1..402 1..411 2016 92.5 Plus
Dana\GF13179-PA 654 GF13179-PA 25..294 9..277 763 50.5 Plus
Dana\GF17126-PA 190 GF17126-PA 1..190 429..642 719 72.9 Plus
Dana\GF25017-PA 1408 GF25017-PA 27..344 8..307 671 44.4 Plus
Dana\GF11577-PA 1271 GF11577-PA 21..284 8..264 653 46.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:41:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21995-PA 640 GG21995-PA 1..640 1..642 3324 97.4 Plus
Dere\GG20903-PA 666 GG20903-PA 38..307 9..277 756 49.5 Plus
Dere\GG14510-PA 1528 GG14510-PA 27..341 8..305 675 45.6 Plus
Dere\GG21950-PA 1240 GG21950-PA 21..284 8..264 651 46 Plus
Dere\GG22936-PA 702 GG22936-PA 196..473 19..272 583 43.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:41:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21549-PA 649 GH21549-PA 1..649 1..642 2388 73.6 Plus
Dgri\GH22772-PA 691 GH22772-PA 24..293 9..277 769 50.5 Plus
Dgri\GH16388-PA 1550 GH16388-PA 30..344 8..305 678 45.6 Plus
Dgri\GH23090-PA 986 GH23090-PA 31..314 17..289 673 44.9 Plus
Dgri\GH19531-PA 827 GH19531-PA 548..817 8..276 614 42.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
GckIII-PA 642 CG5169-PA 1..642 1..642 3283 100 Plus
hpo-PB 669 CG11228-PB 38..543 9..549 740 34.3 Plus
hpo-PA 669 CG11228-PA 38..543 9..549 740 34.3 Plus
msn-PG 1101 CG16973-PG 27..589 8..542 686 33.7 Plus
msn-PC 1102 CG16973-PC 27..589 8..542 686 33.7 Plus
msn-PD 1102 CG16973-PD 27..589 8..542 686 33.7 Plus
msn-PF 1404 CG16973-PF 27..589 8..542 686 33.7 Plus
msn-PI 1200 CG16973-PI 27..567 8..524 674 34.1 Plus
msn-PB 1200 CG16973-PB 27..567 8..524 674 34.1 Plus
msn-PA 1504 CG16973-PA 27..567 8..524 674 34.1 Plus
msn-PH 1213 CG16973-PH 27..582 8..542 673 33.5 Plus
hppy-PD 1205 CG7097-PD 30..682 17..606 666 30.2 Plus
hppy-PE 934 CG7097-PE 30..556 17..487 656 33.3 Plus
hppy-PA 1218 CG7097-PA 30..695 17..606 652 30.1 Plus
hppy-PB 947 CG7097-PB 30..559 17..525 648 31.8 Plus
hppy-PC 968 CG7097-PC 30..284 17..264 638 48.8 Plus
Pak-PJ 704 CG10295-PJ 425..694 8..276 580 42.4 Plus
Pak-PE 704 CG10295-PE 425..694 8..276 580 42.4 Plus
Pak-PB 704 CG10295-PB 425..694 8..276 580 42.4 Plus
Pak-PA 704 CG10295-PA 425..694 8..276 580 42.4 Plus
Pak-PC 704 CG10295-PC 425..694 8..276 580 42.4 Plus
Pak-PI 840 CG10295-PI 561..830 8..276 580 42.4 Plus
Pak-PH 840 CG10295-PH 561..830 8..276 580 42.4 Plus
Pak-PG 840 CG10295-PG 561..830 8..276 580 42.4 Plus
Pak-PF 840 CG10295-PF 561..830 8..276 580 42.4 Plus
Tao-PI 1038 CG14217-PI 20..404 6..409 570 35.4 Plus
Tao-PH 611 CG14217-PH 20..405 6..409 558 35.4 Plus
Tao-PJ 615 CG14217-PJ 20..405 6..409 558 35.4 Plus
Tao-PF 1039 CG14217-PF 20..405 6..409 558 35.4 Plus
Tao-PD 1039 CG14217-PD 20..405 6..409 558 35.4 Plus
Tao-PE 1039 CG14217-PE 20..405 6..409 558 35.4 Plus
Slik-PG 1365 CG4527-PG 32..426 8..399 554 33.5 Plus
Slik-PA 1300 CG4527-PA 32..331 8..299 547 38.9 Plus
Slik-PE 1342 CG4527-PE 32..331 8..299 547 38.9 Plus
Slik-PF 1635 CG4527-PF 32..331 8..299 547 38.9 Plus
Slik-PB 1703 CG4527-PB 32..331 8..299 547 38.9 Plus
Slik-PD 1703 CG4527-PD 32..331 8..299 547 38.9 Plus
fray-PI 552 CG7693-PI 44..321 19..272 546 43.5 Plus
fray-PH 552 CG7693-PH 44..321 19..272 546 43.5 Plus
fray-PG 552 CG7693-PG 44..321 19..272 546 43.5 Plus
fray-PF 552 CG7693-PF 44..321 19..272 546 43.5 Plus
fray-PE 552 CG7693-PE 44..321 19..272 546 43.5 Plus
fray-PC 552 CG7693-PC 44..321 19..272 546 43.5 Plus
fray-PB 552 CG7693-PB 44..321 19..272 546 43.5 Plus
fray-PA 552 CG7693-PA 44..321 19..272 546 43.5 Plus
mbt-PA 639 CG18582-PA 363..632 8..276 489 37.3 Plus
Pak3-PC 569 CG14895-PC 288..563 8..281 472 36.3 Plus
Pak3-PA 569 CG14895-PA 288..563 8..281 472 36.3 Plus
Pak3-PD 583 CG14895-PD 288..563 8..281 472 36.3 Plus
ninaC-PD 1135 CG5125-PD 4..288 1..269 456 33.9 Plus
ninaC-PC 1135 CG5125-PC 4..288 1..269 456 33.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10558-PA 685 GI10558-PA 1..685 1..642 2425 75.4 Plus
Dmoj\GI20569-PA 672 GI20569-PA 23..292 9..277 769 50.5 Plus
Dmoj\GI18916-PA 976 GI18916-PA 21..284 8..264 687 47.5 Plus
Dmoj\GI12471-PA 1551 GI12471-PA 26..340 8..305 680 45.6 Plus
Dmoj\GI23008-PA 713 GI23008-PA 434..703 8..276 620 43.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27268-PA 617 GL27268-PA 1..617 1..642 2576 82.1 Plus
Dper\GL10521-PA 661 GL10521-PA 21..290 9..277 754 49.8 Plus
Dper\GL21741-PA 547 GL21741-PA 268..537 8..276 614 43 Plus
Dper\GL22452-PA 631 GL22452-PA 11..279 56..305 595 46.3 Plus
Dper\GL14776-PA 1036 GL14776-PA 20..354 6..322 574 39.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18707-PA 617 GA18707-PA 1..617 1..642 2581 82.3 Plus
Dpse\GA10852-PA 661 GA10852-PA 21..290 9..277 754 49.8 Plus
Dpse\GA24328-PA 1581 GA24328-PA 29..343 8..305 675 45.6 Plus
Dpse\GA20098-PB 1275 GA20098-PB 21..284 8..264 650 46.4 Plus
Dpse\GA20098-PC 942 GA20098-PC 30..284 17..264 645 47.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15206-PA 640 GM15206-PA 1..640 1..642 3366 98.3 Plus
Dsec\GM19825-PA 668 GM19825-PA 38..307 9..277 762 49.8 Plus
Dsec\GM14115-PA 1518 GM14115-PA 27..341 8..305 675 45.6 Plus
Dsec\GM21937-PA 947 GM21937-PA 21..284 8..264 652 46.4 Plus
Dsec\GM10890-PA 701 GM10890-PA 422..691 8..276 609 42.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15163-PA 357 GD15163-PA 1..339 88..428 1776 97.7 Plus
Dsim\GD25317-PA 668 GD25317-PA 38..307 9..277 763 49.8 Plus
Dsim\GD13385-PA 1165 GD13385-PA 27..341 8..305 666 45.3 Plus
Dsim\GD11434-PA 1165 GD11434-PA 21..284 8..264 655 46.4 Plus
Dsim\GD19869-PA 701 GD19869-PA 422..691 8..276 609 42.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22913-PA 659 GJ22913-PA 1..659 1..642 2433 77.2 Plus
Dvir\GJ21419-PA 681 GJ21419-PA 23..292 9..277 770 50.5 Plus
Dvir\GJ19771-PA 1037 GJ19771-PA 21..313 8..289 687 44.2 Plus
Dvir\GJ12373-PA 1553 GJ12373-PA 29..330 8..305 636 43.1 Plus
Dvir\GJ24601-PA 705 GJ24601-PA 426..695 8..276 616 43.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22562-PA 621 GK22562-PA 3..621 1..642 2395 74.7 Plus
Dwil\GK15703-PA 636 GK15703-PA 17..286 9..277 763 49.8 Plus
Dwil\GK20667-PA 1300 GK20667-PA 21..284 8..264 655 46.4 Plus
Dwil\GK12175-PA 722 GK12175-PA 443..712 8..276 614 42.8 Plus
Dwil\GK13090-PA 726 GK13090-PA 225..502 19..272 588 43.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24610-PA 640 GE24610-PA 1..640 1..642 3323 96.7 Plus
Dyak\GE13841-PA 672 GE13841-PA 38..307 9..277 759 49.5 Plus
Dyak\GE21701-PA 1524 GE21701-PA 27..341 8..305 674 45.6 Plus
Dyak\GE12024-PA 1248 GE12024-PA 21..284 8..264 655 46.4 Plus
Dyak\GE10214-PA 704 GE10214-PA 425..694 8..276 610 42.6 Plus