Clone FI20187 Report

Search the DGRC for FI20187

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:201
Well:87
Vector:pFlc-1
Associated Gene/TranscriptCG18004-RA
Protein status:FI20187.pep: gold
Sequenced Size:1186

Clone Sequence Records

FI20187.complete Sequence

1186 bp assembled on 2012-04-04

GenBank Submission: BT133355.1

> FI20187.complete
AGTTATCGCAATGCTCCCATCTCTATGAGGCATGTACATAAAAGAAAAAA
TTAACAAAACGCGAATACCATTAAAATACAATGCTAGACGGTTGGTACTG
CAGATCCCTGGCCAACCAGGAGGATGGCGCCATAAAGGACGAGCCGCCGA
GCGACGACGAGCCCGCACAGCCCGCCAGAGATCGCGTCCCGCCAATTTCC
CGCGGAGCAGCGCCCGCTAGCTCATCCTCCGTATCCGCGGGCCTGGGCGC
AGGCGAGACTGACTTCAAGGAGCGCTACAAGAACCTCAAGAAGAAGCTGA
AGTTCCTCATCTATGAGAACGAGTACTTCCAGGATCTATTGCACACCAAC
CAGCGGCGTCTGCTGAAAGTTTCCCGGGATCGTACCTTCCTGCTGGACCG
TCTGCTGGTGTACGAGAAGCCGGCCAAGGACTCTAGCGACTCGGATGCCA
CCGACAGCTCCGATTCGGAGCCAGCTTCTACGTCCGGCGTTGCCGGCGGA
TCGCAAACATCCAAGGACGCCATTCGGCGCAAGCACAAAGACAAGGGGGC
ACCAGGAATTCCAGGTGTGCCTCCGCACATGCCCACAGTGGGCGCCCCAC
GAGGTCGAAGACGAAAAATCCTAACCGGAATGTTGCCCGCGAACCATGGA
ATCCCAGCAATTGCTGCGAAAAAACAACTTACCGCCACGGTGTCACCTTC
GCAGCAGCCACCGCAACTACAGACTGCTCCGAAGGATGTGTCGCCCGGCC
TCAGCCAAGCGGAGATTGCCCGCCAGCTGCAGGAGCGACGACCGACGCCG
TTGGAGCTATTGAGTCCGGAATGCACTTCGGCCACCGTGCCCACAACGAT
GCTCAGCGATGAAAGCCCCTCTAAGTGTTATCCCAATGAAAGCCTGCAGC
ATCTGATGGAGGACGACTCTCACTCGCACGAGGTGGCCGCCGAGGAGTGC
GTGCCCATGGAGTACACAAGTTAATATTCTTTACTGAGCTAAATATGAAA
ATACGAAAATAAATTAACTAGATCCAGCTGGATTGATATATTATTTAGTT
TGTTTTTAAATAACTTTCTTGGGGCTCCTCTACAAGATTGAAATTTACTA
ACATGTTTATTCTTTAAATAATCGAAAAGGGCTTACAAGGAAATTAAATG
GAAATAAAATCATTGTAAACAAAAAAAAAAAAAAAA

FI20187.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:14:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 6773181..6773743 315..877 2815 100 Plus
chr2R 21145070 chr2R 6772810..6773124 1..315 1575 100 Plus
chr2R 21145070 chr2R 6773801..6774094 877..1170 1470 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:14:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10885590..10886152 315..877 2815 100 Plus
2R 25286936 2R 10885219..10885533 1..315 1575 100 Plus
2R 25286936 2R 10886210..10886504 877..1171 1475 100 Plus
Blast to na_te.dros performed on 2019-03-15 13:14:04 has no hits.

FI20187.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:14:57 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 6772810..6773123 1..314 100 -> Plus
chr2R 6773181..6773743 315..877 100 -> Plus
chr2R 6773802..6774094 878..1170 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-04 12:05:42 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
CG18004-RA 1..894 81..974 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:59:26 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
CG18004-RA 1..894 81..974 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:25:16 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
CG18004-RA 1..894 81..974 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-04 12:05:42 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
CG18004-RA 1..1027 16..1042 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:59:26 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
CG18004-RA 3..1044 1..1042 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:25:16 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
CG18004-RA 3..1044 1..1042 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:14:57 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10885219..10885532 1..314 100 -> Plus
2R 10885590..10886152 315..877 100 -> Plus
2R 10886211..10886503 878..1170 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:14:57 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10885219..10885532 1..314 100 -> Plus
2R 10885590..10886152 315..877 100 -> Plus
2R 10886211..10886503 878..1170 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:14:57 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10885219..10885532 1..314 100 -> Plus
2R 10885590..10886152 315..877 100 -> Plus
2R 10886211..10886503 878..1170 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:59:26 Download gff for FI20187.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6773716..6774008 878..1170 100   Plus
arm_2R 6772724..6773037 1..314 100 -> Plus
arm_2R 6773095..6773657 315..877 100 -> Plus

FI20187.hyp Sequence

Translation from 80 to 973

> FI20187.hyp
MLDGWYCRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSS
VSAGLGAGETDFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRD
RTFLLDRLLVYEKPAKDSSDSDATDSSDSEPASTSGVAGGSQTSKDAIRR
KHKDKGAPGIPGVPPHMPTVGAPRGRRRKILTGMLPANHGIPAIAAKKQL
TATVSPSQQPPQLQTAPKDVSPGLSQAEIARQLQERRPTPLELLSPECTS
ATVPTTMLSDESPSKCYPNESLQHLMEDDSHSHEVAAEECVPMEYTS*

FI20187.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:24:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG18004-PA 297 CG18004-PA 1..297 1..297 1542 100 Plus
CG18004-PB 291 CG18004-PB 2..291 8..297 1494 100 Plus
CG18004-PD 291 CG18004-PD 1..291 1..297 1491 98 Plus

FI20187.pep Sequence

Translation from 80 to 973

> FI20187.pep
MLDGWYCRSLANQEDGAIKDEPPSDDEPAQPARDRVPPISRGAAPASSSS
VSAGLGAGETDFKERYKNLKKKLKFLIYENEYFQDLLHTNQRRLLKVSRD
RTFLLDRLLVYEKPAKDSSDSDATDSSDSEPASTSGVAGGSQTSKDAIRR
KHKDKGAPGIPGVPPHMPTVGAPRGRRRKILTGMLPANHGIPAIAAKKQL
TATVSPSQQPPQLQTAPKDVSPGLSQAEIARQLQERRPTPLELLSPECTS
ATVPTTMLSDESPSKCYPNESLQHLMEDDSHSHEVAAEECVPMEYTS*

FI20187.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:08:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13783-PA 299 GF13783-PA 1..299 1..297 1004 78.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20156-PA 297 GG20156-PA 1..297 1..297 1290 95.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:08:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20557-PA 313 GH20557-PA 1..313 1..297 722 57.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG18004-PA 297 CG18004-PA 1..297 1..297 1542 100 Plus
CG18004-PB 291 CG18004-PB 2..291 8..297 1494 100 Plus
CG18004-PD 291 CG18004-PD 1..291 1..297 1491 98 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:08:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18826-PA 305 GI18826-PA 1..305 1..297 752 62.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20093-PA 295 GL20093-PA 1..295 1..297 1049 73.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:08:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24928-PA 295 GA24928-PA 1..295 1..297 1043 73.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21245-PA 297 GM21245-PA 1..297 1..297 1545 98.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:08:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10763-PA 252 GD10763-PA 1..252 1..297 1246 82.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:08:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21854-PA 298 GJ21854-PA 1..298 1..297 779 61.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:08:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20638-PA 326 GK20638-PA 1..326 1..297 681 54.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:08:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12846-PA 297 GE12846-PA 1..297 1..297 1266 94.3 Plus