Clone FI20203 Report

Search the DGRC for FI20203

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:202
Well:3
Vector:pFlc-1
Associated Gene/TranscriptCG31976-RB
Protein status:FI20203.pep: gold
Sequenced Size:1030

Clone Sequence Records

FI20203.complete Sequence

1030 bp assembled on 2012-04-04

GenBank Submission: BT133359.1

> FI20203.complete
AGGGGCTGAGGAACGCCCCAAGCTTACGGACGTGCTGAAGAATACGGGAT
CGGAGCGTATTAGCCGCAAATTAAGCCAAATTCTGAACTTGGCCGAAAAG
TTTGACATATTGTACTAGGGCAATAAATTGATACGAAAACGAGATTTCTG
GTTTAGAAAATAAACGTGAATACAGTAGTAGTCAGTTTTGGGAATCATGA
GCGCTACCTGGGTAACGATTCTCAGCATCTCGACTTGTGTGGTTCTGCTG
AAGCTCAGTGAGATCAGGAGCAAGGAGAGCTGTTATTATGTGACCTTCAC
GTATGCCAATTGGACGGATGACCGACCTCGGTTTGTTGTGAACATGACCT
TCTCGAATCAGACTGGCATCGGCTCAGTAACCACCATTAACGAGGAGATT
GCCTCACCGGTGTCTCGCATCCTCATACTTCAGCACTCCGGTCGGGGTAA
GCCTCGCACCATATACAACGCCTCCACCAAACTGTGCGACCTGCAGAATG
TCTTCAATTCCGTACCGCTTTTTAAGCCAGCCAAGGACAACATGCTCAAG
CAAAGTAACTACACGCTGAGCTGTCCTCTGGTCAAAGGCACATACGTCAT
GATCAACATGCGCGTAAGCCCCAAAAACCCACTTCTGAGCCTTCTCTACC
AACCGAAACAAACGTTCTCCGTGAGTGGCGGCTTGTTTGAAGAACTTTCA
CGTGGCCGCAGACTAAGGGCGCTGTCCACCTACTTCATGACTGGAAAGGT
TGTGAAAAAGTACTGTGGATCCAATGAATAAAGATCGACCGAAATAAATC
AGCACAACTATATATCAGATAAAGTAGTCTGATACGGCTTGTGTTCAACC
TGCAATAGAGAGAAGACATTTGGAATATCTTCTGGAAGATAGCACTATGA
GAATATTTTATGCAGAAACGTACAGACGGACATCGACTCAGCTGTTGATC
AATAATATATATACTTTACACTTTATACCTCTGAATATAATTTCCACAAA
CTGTTAAAGTGATCAAAAAAAAAAAAAAAA

FI20203.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 138706..139237 807..276 2660 100 Minus
chr2L 23010047 chr2L 138421..138627 1014..808 1035 100 Minus
chr2L 23010047 chr2L 139479..139622 147..4 720 100 Minus
chr2L 23010047 chr2L 139293..139422 277..148 650 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:15:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 138669..139200 807..276 2660 100 Minus
2L 23513712 2L 138377..138590 1021..808 1070 100 Minus
2L 23513712 2L 139442..139585 147..4 720 100 Minus
2L 23513712 2L 139256..139385 277..148 650 100 Minus
Blast to na_te.dros performed 2019-03-15 13:15:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dfun\Isfun-1 928 Dfun\Isfun-1 DFU309320 928bp Derived from AJ309320 (Rel. 68, Last updated, Version 1). 76..120 970..932 122 80 Minus
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 3093..3129 933..968 119 83.8 Plus
Dsub\SGM 823 Dsub\SGM SGM 823bp Derived from AF043638. 97..124 968..941 113 89.3 Minus
Dbuz\ISBu2 726 Dbuz\ISBu2 ISBU2 726bp 91..116 968..943 112 92.3 Minus

FI20203.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:16:26 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 138421..138627 808..1014 100 <- Minus
chr2L 138706..139235 278..807 100 <- Minus
chr2L 139293..139422 148..277 100 <- Minus
chr2L 139479..139625 1..147 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-04-04 13:43:34 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
CG31976-RB 1..585 197..781 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:00:00 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
CG31976-RB 1..585 197..781 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:26:17 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
CG31976-RC 1..585 197..781 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-04 13:43:34 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
CG31975-RC 1193..2206 1..1014 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:00:00 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
CG31976-RB 1193..2206 1..1014 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:26:17 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
CG31975-RC 1193..2206 1..1014 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:26 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
2L 139442..139588 1..147 99   Minus
2L 138384..138590 808..1014 100 <- Minus
2L 138669..139198 278..807 100 <- Minus
2L 139256..139385 148..277 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:26 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
2L 139442..139588 1..147 99   Minus
2L 138384..138590 808..1014 100 <- Minus
2L 138669..139198 278..807 100 <- Minus
2L 139256..139385 148..277 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:16:26 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
2L 139442..139588 1..147 99   Minus
2L 138384..138590 808..1014 100 <- Minus
2L 138669..139198 278..807 100 <- Minus
2L 139256..139385 148..277 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:00:00 Download gff for FI20203.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 138384..138590 808..1014 100 <- Minus
arm_2L 138669..139198 278..807 100 <- Minus
arm_2L 139256..139385 148..277 100 <- Minus
arm_2L 139442..139588 1..147 99   Minus

FI20203.hyp Sequence

Translation from 196 to 780

> FI20203.hyp
MSATWVTILSISTCVVLLKLSEIRSKESCYYVTFTYANWTDDRPRFVVNM
TFSNQTGIGSVTTINEEIASPVSRILILQHSGRGKPRTIYNASTKLCDLQ
NVFNSVPLFKPAKDNMLKQSNYTLSCPLVKGTYVMINMRVSPKNPLLSLL
YQPKQTFSVSGGLFEELSRGRRLRALSTYFMTGKVVKKYCGSNE*

FI20203.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:25:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG31976-PB 194 CG31976-PB 1..194 1..194 1001 100 Plus
CG31976-PC 194 CG31976-PC 1..194 1..194 1001 100 Plus
CG12662-PA 171 CG12662-PA 11..171 42..190 195 27.3 Plus

FI20203.pep Sequence

Translation from 196 to 780

> FI20203.pep
MSATWVTILSISTCVVLLKLSEIRSKESCYYVTFTYANWTDDRPRFVVNM
TFSNQTGIGSVTTINEEIASPVSRILILQHSGRGKPRTIYNASTKLCDLQ
NVFNSVPLFKPAKDNMLKQSNYTLSCPLVKGTYVMINMRVSPKNPLLSLL
YQPKQTFSVSGGLFEELSRGRRLRALSTYFMTGKVVKKYCGSNE*

FI20203.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-17 00:10:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15045-PA 195 GF15045-PA 1..195 1..194 808 76.5 Plus
Dana\GF19118-PA 197 GF19118-PA 20..197 25..190 200 27.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-17 00:10:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24681-PA 194 GG24681-PA 1..194 1..194 930 90.7 Plus
Dere\GG19012-PA 171 GG19012-PA 11..171 42..190 180 24.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-17 00:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11716-PA 151 GH11716-PA 1..140 28..167 519 65.7 Plus
Dgri\GH12069-PA 194 GH12069-PA 12..169 16..165 178 27.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
ovm-PB 194 CG31976-PB 1..194 1..194 1001 100 Plus
ovm-PC 194 CG31976-PC 1..194 1..194 1001 100 Plus
CG12662-PB 196 CG12662-PB 20..196 25..190 205 27.5 Plus
CG12662-PA 171 CG12662-PA 11..171 42..190 195 27.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-17 00:10:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16180-PA 144 GI16180-PA 1..144 50..194 457 60 Plus
Dmoj\GI15560-PA 193 GI15560-PA 11..192 15..188 188 26.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-17 00:10:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16538-PA 144 GL16538-PA 1..144 50..194 624 80 Plus
Dper\GL13027-PA 171 GL13027-PA 8..169 40..187 180 30.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-17 00:10:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16594-PA 144 GA16594-PA 1..144 50..194 624 80 Plus
Dpse\GA11744-PA 190 GA11744-PA 13..188 25..187 188 29.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-17 00:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16699-PA 194 GM16699-PA 1..194 1..194 1007 97.4 Plus
Dsec\GM13690-PA 171 GM13690-PA 11..171 42..190 181 26.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-17 00:10:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22987-PA 202 GD22987-PA 1..190 1..194 973 95.4 Plus
Dsim\GD16090-PA 170 GD16090-PA 10..170 42..190 166 23.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-17 00:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16203-PA 144 GJ16203-PA 1..144 50..194 469 60 Plus
Dvir\GJ15174-PA 193 GJ15174-PA 7..193 8..190 203 26.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-17 00:10:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19356-PA 143 GK19356-PA 1..143 50..194 556 72.4 Plus
Dwil\GK16816-PA 169 GK16816-PA 10..143 42..164 168 28.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-17 00:10:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16438-PA 194 GE16438-PA 1..194 1..194 951 91.2 Plus
Dyak\GE17423-PA 171 GE17423-PA 11..171 42..190 183 26.7 Plus